RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, humanhuman

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-223ENST00000511081 NCDNQ9UBB6 729 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 NAGPAQ9UK23 515 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 NUDT5Q9UKK9 219 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 MMP17Q9ULZ9 603 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 STARD13Q9Y3M8 1113 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 MDM4O15151 490 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 TULP3O75386 442 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 ZBED1O96006 694 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 AFPP02771 609 aaKnown RBP12.74□□□□□ -0.37
CLDND1-223ENST00000511081 APODP05090 189 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 SETSIPP0DME0 302 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 CCDC192P0DO97 292 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 PXNP49023 591 aaPredicted RBP12.74□□□□□ -0.37
CLDND1-223ENST00000511081 RPL34P49207 117 aaKnown RBP12.74□□□□□ -0.37
CLDND1-223ENST00000511081 TKTL1P51854 596 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 GOLGA8FQ08AF8 430 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 GOLGA8DPQ0D2H9 430 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 STILQ15468 1287 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 CAMK4Q16566 473 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 GOLGA7BQ2TAP0 167 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 PREPLQ4J6C6 727 aaPredicted RBP12.74□□□□□ -0.37
CLDND1-223ENST00000511081 C10orf120Q5SQS8 335 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 EMC10Q5UCC4 262 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 TMEM270Q6UE05 265 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 RASSF3Q86WH2 238 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 SFTPA1Q8IWL2 248 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 PPM1KQ8N3J5 372 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 IL17RCQ8NAC3 791 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 KAT5Q92993 513 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 SECISBP2LQ93073 1101 aaKnown RBP12.74□□□□□ -0.37
CLDND1-223ENST00000511081 LOXL4Q96JB6 756 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 KREMEN1Q96MU8 473 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 ULBP1Q9BZM6 244 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 ARHGEF4Q9NR80 690 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 DLL3Q9NYJ7 618 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 WDR35Q9P2L0 1181 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 DEC1Q9P2X7 70 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 HESX1Q9UBX0 185 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 LSM7Q9UK45 103 aaKnown RBP12.74□□□□□ -0.37
CLDND1-223ENST00000511081 RAB23Q9ULC3 237 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 ZNF510Q9Y2H8 683 aa12.74□□□□□ -0.37
CLDND1-223ENST00000511081 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.74□□□□□ -0.37
CLDND1-223ENST00000511081 AXIN1O15169 862 aa12.73□□□□□ -0.37
CLDND1-223ENST00000511081 CACNG3O60359 315 aa12.73□□□□□ -0.37
CLDND1-223ENST00000511081 APBB3O95704 486 aa12.73□□□□□ -0.37
CLDND1-223ENST00000511081 CISD3P0C7P0 127 aa12.73□□□□□ -0.37
CLDND1-223ENST00000511081 IRF1P10914 325 aa12.73□□□□□ -0.37
CLDND1-223ENST00000511081 ID4P47928 161 aa12.73□□□□□ -0.37
CLDND1-223ENST00000511081 YWHAGP61981 247 aaKnown RBP eCLIP12.73□□□□□ -0.37
CLDND1-223ENST00000511081 CRY1Q16526 586 aa12.73□□□□□ -0.37
CLDND1-223ENST00000511081 C2orf27AQ580R0 203 aa12.73□□□□□ -0.37
CLDND1-223ENST00000511081 BTBD8Q5XKL5 378 aa12.73□□□□□ -0.37
CLDND1-223ENST00000511081 RRAGAQ7L523 313 aa12.73□□□□□ -0.37
CLDND1-223ENST00000511081 CACNA2D4Q7Z3S7 1137 aa12.73□□□□□ -0.37
CLDND1-223ENST00000511081 ARHGEF19Q8IW93 802 aa12.73□□□□□ -0.37
CLDND1-223ENST00000511081 FAM160A2Q8N612 972 aaPredicted RBP12.73□□□□□ -0.37
CLDND1-223ENST00000511081 UBA3Q8TBC4 463 aa12.73□□□□□ -0.37
CLDND1-223ENST00000511081 P2RY11Q96G91 374 aa12.73□□□□□ -0.37
CLDND1-223ENST00000511081 HSFY1Q96LI6 401 aa12.73□□□□□ -0.37
CLDND1-223ENST00000511081 DCLK3Q9C098 648 aa12.73□□□□□ -0.37
CLDND1-223ENST00000511081 CLSTN2Q9H4D0 955 aa12.73□□□□□ -0.37
CLDND1-223ENST00000511081 PARD6AQ9NPB6 346 aa12.73□□□□□ -0.37
CLDND1-223ENST00000511081 CNGB3Q9NQW8 809 aa12.73□□□□□ -0.37
CLDND1-223ENST00000511081 GMEB2Q9UKD1 530 aa12.73□□□□□ -0.37
CLDND1-223ENST00000511081 HCN2Q9UL51 889 aa12.73□□□□□ -0.37
CLDND1-223ENST00000511081 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.73□□□□□ -0.37
CLDND1-223ENST00000511081 PCDHB4Q9Y5E5 795 aa12.73□□□□□ -0.37
CLDND1-223ENST00000511081 RALGAPA1Q6GYQ0 2036 aa12.72□□□□□ -0.37
CLDND1-223ENST00000511081 RPP40O75818 363 aaKnown RBP12.72□□□□□ -0.37
CLDND1-223ENST00000511081 TYRP14679 529 aa12.72□□□□□ -0.37
CLDND1-223ENST00000511081 HNRNPLP14866 589 aaKnown RBP eCLIP12.72□□□□□ -0.37
CLDND1-223ENST00000511081 CD19P15391 556 aa12.72□□□□□ -0.37
CLDND1-223ENST00000511081 DGKEP52429 567 aa12.72□□□□□ -0.37
CLDND1-223ENST00000511081 TRIP4Q15650 581 aaPredicted RBP12.72□□□□□ -0.37
CLDND1-223ENST00000511081 MEA1Q16626 185 aa12.72□□□□□ -0.37
CLDND1-223ENST00000511081 BSPRYQ5W0U4 402 aa12.72□□□□□ -0.37
CLDND1-223ENST00000511081 PMF1Q6P1K2 205 aa12.72□□□□□ -0.37
CLDND1-223ENST00000511081 TMEM92Q6UXU6 159 aa12.72□□□□□ -0.37
CLDND1-223ENST00000511081 FAM217AQ8IXS0 508 aa12.72□□□□□ -0.37
CLDND1-223ENST00000511081 NAT16Q8N8M0 369 aa12.72□□□□□ -0.37
CLDND1-223ENST00000511081 TERB1Q8NA31 727 aa12.72□□□□□ -0.37
CLDND1-223ENST00000511081 OLIG1Q8TAK6 271 aa12.72□□□□□ -0.37
CLDND1-223ENST00000511081 IRGQQ8WZA9 623 aa12.72□□□□□ -0.37
CLDND1-223ENST00000511081 NDRG1Q92597 394 aaKnown RBP12.72□□□□□ -0.37
CLDND1-223ENST00000511081 RMDN1Q96DB5 314 aa12.72□□□□□ -0.37
CLDND1-223ENST00000511081 HHIPQ96QV1 700 aa12.72□□□□□ -0.37
CLDND1-223ENST00000511081 HINFPQ9BQA5 517 aa12.72□□□□□ -0.37
CLDND1-223ENST00000511081 INTS2Q9H0H0 1204 aaKnown RBP12.72□□□□□ -0.37
CLDND1-223ENST00000511081 LRRC4Q9HBW1 653 aa12.72□□□□□ -0.37
CLDND1-223ENST00000511081 ABCA7Q8IZY2 2146 aa12.71□□□□□ -0.37
CLDND1-223ENST00000511081 GTPBP10A4D1E9 387 aaKnown RBP12.71□□□□□ -0.37
CLDND1-223ENST00000511081 TBC1D3BA6NDS4 549 aa12.71□□□□□ -0.37
CLDND1-223ENST00000511081 YJEFN3A6XGL0 299 aa12.71□□□□□ -0.37
CLDND1-223ENST00000511081 PRR5-ARHGAP8B1AHC4 643 aa12.71□□□□□ -0.37
CLDND1-223ENST00000511081 E7ENQ6 273 aa12.71□□□□□ -0.37
CLDND1-223ENST00000511081 SGK1O00141 431 aa12.71□□□□□ -0.37
CLDND1-223ENST00000511081 GFRA2O00451 464 aa12.71□□□□□ -0.37
CLDND1-223ENST00000511081 TRIM24O15164 1050 aa12.71□□□□□ -0.37
CLDND1-223ENST00000511081 ADAM23O75077 832 aa12.71□□□□□ -0.37
CLDND1-223ENST00000511081 PENKP01210 267 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms