RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 MYBPHLA2RUH7 354 aa12.97□□□□□ -0.33
LIN54-210ENST00000510877 HOXB2P14652 356 aa12.97□□□□□ -0.33
LIN54-210ENST00000510877 EPHB2P29323 1055 aa12.97□□□□□ -0.33
LIN54-210ENST00000510877 GTF2H3Q13889 308 aa12.97□□□□□ -0.33
LIN54-210ENST00000510877 MESDQ14696 234 aa12.97□□□□□ -0.33
LIN54-210ENST00000510877 RNF19BQ6ZMZ0 732 aa12.97□□□□□ -0.33
LIN54-210ENST00000510877 PRPF39Q86UA1 669 aaKnown RBP12.97□□□□□ -0.33
LIN54-210ENST00000510877 TRIM48Q8IWZ4 208 aa12.97□□□□□ -0.33
LIN54-210ENST00000510877 CCDC68Q9H2F9 335 aa12.97□□□□□ -0.33
LIN54-210ENST00000510877 PHIPQ8WWQ0 1821 aa12.97□□□□□ -0.33
LIN54-210ENST00000510877 LINC01565O15544 149 aa12.97□□□□□ -0.33
LIN54-210ENST00000510877 TBL1XO60907 577 aa12.97□□□□□ -0.33
LIN54-210ENST00000510877 SATB1Q01826 763 aa12.97□□□□□ -0.33
LIN54-210ENST00000510877 COL9A3Q14050 684 aaPredicted RBP12.97□□□□□ -0.33
LIN54-210ENST00000510877 MLF2Q15773 248 aaPredicted RBP12.97□□□□□ -0.33
LIN54-210ENST00000510877 CDCA2Q69YH5 1023 aaPredicted RBP12.97□□□□□ -0.33
LIN54-210ENST00000510877 VIRMAQ69YN4 1812 aaKnown RBP12.97□□□□□ -0.33
LIN54-210ENST00000510877 LRRD1A4D1F6 860 aa12.97□□□□□ -0.33
LIN54-210ENST00000510877 EFCAB8A8MWE9 144 aa12.97□□□□□ -0.33
LIN54-210ENST00000510877 ADH5P11766 374 aa12.97□□□□□ -0.33
LIN54-210ENST00000510877 YWHAZP63104 245 aaKnown RBP12.97□□□□□ -0.33
LIN54-210ENST00000510877 LRRC23Q53EV4 343 aaPredicted RBP12.97□□□□□ -0.33
LIN54-210ENST00000510877 PIGZQ86VD9 579 aa12.97□□□□□ -0.33
LIN54-210ENST00000510877 FAM71BQ8TC56 605 aa12.97□□□□□ -0.33
LIN54-210ENST00000510877 MMTAG2Q9BU76 263 aaKnown RBP12.97□□□□□ -0.33
LIN54-210ENST00000510877 ZBP1Q9H171 429 aa12.97□□□□□ -0.33
LIN54-210ENST00000510877 LRRC37AA6NMS7 1700 aa12.97□□□□□ -0.33
LIN54-210ENST00000510877 SRCAPQ6ZRS2 3230 aa12.97□□□□□ -0.33
LIN54-210ENST00000510877 ADAM15Q13444 863 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 C6orf118Q5T5N4 469 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 KAZNQ674X7 775 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 C1orf127Q8N9H9 656 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 KCNK12Q9HB15 430 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 LMBRD1Q9NUN5 540 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 CNOT8Q9UFF9 292 aaKnown RBP12.96□□□□□ -0.33
LIN54-210ENST00000510877 DOCK1Q14185 1865 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 HOXA11P31270 313 aaPredicted RBP12.96□□□□□ -0.33
LIN54-210ENST00000510877 ZNF75DP51815 510 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 SLC5A3P53794 718 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 RHOAP61586 193 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 RUNX3Q13761 415 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 SLMAPQ14BN4 828 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 ZNF513Q8N8E2 541 aaPredicted RBP12.96□□□□□ -0.33
LIN54-210ENST00000510877 RRN3Q9NYV6 651 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 RP1L1Q8IWN7 2480 aaPredicted RBP12.96□□□□□ -0.33
LIN54-210ENST00000510877 DOCK2Q92608 1830 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 H0Y858 1186 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 RNASEH2AO75792 299 aaKnown RBP12.96□□□□□ -0.33
LIN54-210ENST00000510877 IFNB1P01574 187 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 HTRA4P83105 476 aaPredicted RBP12.96□□□□□ -0.33
LIN54-210ENST00000510877 SETDB1Q15047 1291 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 ECM1Q16610 540 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 UPP1Q16831 310 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 CASC4Q6P4E1 433 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 C11orf74Q86VG3 221 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 OR8K1Q8NGG5 319 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 POMKQ9H5K3 350 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 ATP13A1Q9HD20 1204 aa12.96□□□□□ -0.33
LIN54-210ENST00000510877 DOCK3Q8IZD9 2030 aa12.96□□□□□ -0.34
LIN54-210ENST00000510877 IRX1P78414 480 aaPredicted RBP12.96□□□□□ -0.34
LIN54-210ENST00000510877 POU5F1Q01860 360 aaKnown RBP12.96□□□□□ -0.34
LIN54-210ENST00000510877 CEP128Q6ZU80 1094 aa12.96□□□□□ -0.34
LIN54-210ENST00000510877 ADSSL1Q8N142 457 aa12.96□□□□□ -0.34
LIN54-210ENST00000510877 OR8D1Q8WZ84 308 aa12.96□□□□□ -0.34
LIN54-210ENST00000510877 HEBP1Q9NRV9 189 aa12.96□□□□□ -0.34
LIN54-210ENST00000510877 LAMB2P55268 1798 aa12.96□□□□□ -0.34
LIN54-210ENST00000510877 EP300Q09472 2414 aaPredicted RBP12.96□□□□□ -0.34
LIN54-210ENST00000510877 LAMP2P13473 410 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 SDHBP21912 280 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 FAM189BP81408 668 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 SIGLEC14Q08ET2 396 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 DPYDQ12882 1025 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 PON2Q15165 354 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 SNCBQ16143 134 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 TNFRSF25Q93038 417 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 MRPL45Q9BRJ2 306 aaKnown RBP12.95□□□□□ -0.34
LIN54-210ENST00000510877 AKAP3O75969 853 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 RHOXF2BP0C7M4 288 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 PEX19P40855 299 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 GPC5P78333 572 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 MGAT3Q09327 533 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 TRIM71Q2Q1W2 868 aaKnown RBP12.95□□□□□ -0.34
LIN54-210ENST00000510877 HYIQ5T013 277 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 ARMC6Q6NXE6 501 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 RTN4RL1Q86UN2 441 aaPredicted RBP12.95□□□□□ -0.34
LIN54-210ENST00000510877 TCEAL8Q8IYN2 117 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 ZFYVE19Q96K21 471 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 RHOXF2Q9BQY4 288 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 TTYH1Q9H313 450 aaPredicted RBP12.95□□□□□ -0.34
LIN54-210ENST00000510877 TMEM51Q9NW97 253 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 TRDMT1O14717 391 aaKnown RBP12.95□□□□□ -0.34
LIN54-210ENST00000510877 AXIN1O15169 862 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 DCNP07585 359 aaKnown RBP12.95□□□□□ -0.34
LIN54-210ENST00000510877 PPARGP37231 505 aaPredicted RBP12.95□□□□□ -0.34
LIN54-210ENST00000510877 MAPK8P45983 427 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 LIG3P49916 1009 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 ERAP2Q6P179 960 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 ADGRD2Q7Z7M1 963 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 HS6ST3Q8IZP7 471 aa12.95□□□□□ -0.34
LIN54-210ENST00000510877 CCDC89Q8N998 374 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms