RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 PCDHB4Q9Y5E5 795 aa24.12■■□□□ 1.45
SNF8-209ENST00000510558 NEDD8-MDP1E9PL57 170 aa24.11■■□□□ 1.45
SNF8-209ENST00000510558 KLF8O95600 359 aaPredicted RBP24.11■■□□□ 1.45
SNF8-209ENST00000510558 ZBED1O96006 694 aa24.11■■□□□ 1.45
SNF8-209ENST00000510558 PAEPP09466 180 aa24.11■■□□□ 1.45
SNF8-209ENST00000510558 KIR2DL1P43626 348 aaPredicted RBP24.11■■□□□ 1.45
SNF8-209ENST00000510558 DGKEP52429 567 aa24.11■■□□□ 1.45
SNF8-209ENST00000510558 YWHAGP61981 247 aaKnown RBP eCLIP24.11■■□□□ 1.45
SNF8-209ENST00000510558 EFEMP1Q12805 493 aa24.11■■□□□ 1.45
SNF8-209ENST00000510558 CRY1Q16526 586 aa24.11■■□□□ 1.45
SNF8-209ENST00000510558 HSF5Q4G112 596 aaPredicted RBP24.11■■□□□ 1.45
SNF8-209ENST00000510558 PREPLQ4J6C6 727 aaPredicted RBP24.11■■□□□ 1.45
SNF8-209ENST00000510558 EMC10Q5UCC4 262 aa24.11■■□□□ 1.45
SNF8-209ENST00000510558 PM20D1Q6GTS8 502 aa24.11■■□□□ 1.45
SNF8-209ENST00000510558 TPGS1Q6ZTW0 290 aa24.11■■□□□ 1.45
SNF8-209ENST00000510558 KBTBD6Q86V97 674 aa24.11■■□□□ 1.45
SNF8-209ENST00000510558 IL17RCQ8NAC3 791 aa24.11■■□□□ 1.45
SNF8-209ENST00000510558 TXNDC5Q8NBS9 432 aaKnown RBP24.11■■□□□ 1.45
SNF8-209ENST00000510558 UBA3Q8TBC4 463 aa24.11■■□□□ 1.45
SNF8-209ENST00000510558 BBS2Q9BXC9 721 aa24.11■■□□□ 1.45
SNF8-209ENST00000510558 MARK1Q9P0L2 795 aa24.11■■□□□ 1.45
SNF8-209ENST00000510558 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.11■■□□□ 1.45
SNF8-209ENST00000510558 DCHS1Q96JQ0 3298 aa24.11■■□□□ 1.45
SNF8-209ENST00000510558 TBC1D3BA6NDS4 549 aa24.1■■□□□ 1.45
SNF8-209ENST00000510558 FGFR1OPO95684 399 aaKnown RBP24.1■■□□□ 1.45
SNF8-209ENST00000510558 AFPP02771 609 aaKnown RBP24.1■■□□□ 1.45
SNF8-209ENST00000510558 SETSIPP0DME0 302 aa24.1■■□□□ 1.45
SNF8-209ENST00000510558 COG7P83436 770 aa24.1■■□□□ 1.45
SNF8-209ENST00000510558 PUM1Q14671 1186 aaKnown RBP eCLIP24.1■■□□□ 1.45
SNF8-209ENST00000510558 RSPO4Q2I0M5 234 aaPredicted RBP24.1■■□□□ 1.45
SNF8-209ENST00000510558 PKDCCQ504Y2 493 aa24.1■■□□□ 1.45
SNF8-209ENST00000510558 RSRC2Q7L4I2 434 aaKnown RBP24.1■■□□□ 1.45
SNF8-209ENST00000510558 BHLHA9Q7RTU4 235 aa24.1■■□□□ 1.45
SNF8-209ENST00000510558 ARHGEF19Q8IW93 802 aa24.1■■□□□ 1.45
SNF8-209ENST00000510558 TERB1Q8NA31 727 aa24.1■■□□□ 1.45
SNF8-209ENST00000510558 EHBP1Q8NDI1 1231 aa24.1■■□□□ 1.45
SNF8-209ENST00000510558 TFAP2BQ92481 460 aa24.1■■□□□ 1.45
SNF8-209ENST00000510558 SEMA4GQ9NTN9 838 aa24.1■■□□□ 1.45
SNF8-209ENST00000510558 DNAJC17Q9NVM6 304 aaKnown RBP24.1■■□□□ 1.45
SNF8-209ENST00000510558 WDR35Q9P2L0 1181 aa24.1■■□□□ 1.45
SNF8-209ENST00000510558 PRR5-ARHGAP8B1AHC4 643 aa24.09■■□□□ 1.45
SNF8-209ENST00000510558 RNF225M0QZC1 329 aaPredicted RBP24.09■■□□□ 1.45
SNF8-209ENST00000510558 SGK1O00141 431 aa24.09■■□□□ 1.45
SNF8-209ENST00000510558 TRIM24O15164 1050 aa24.09■■□□□ 1.45
SNF8-209ENST00000510558 CACNG3O60359 315 aa24.09■■□□□ 1.45
SNF8-209ENST00000510558 TYRP14679 529 aa24.09■■□□□ 1.45
SNF8-209ENST00000510558 ARHGAP8P85298 464 aa24.09■■□□□ 1.45
SNF8-209ENST00000510558 ADIGQ0VDE8 80 aa24.09■■□□□ 1.45
SNF8-209ENST00000510558 GRAMD4Q6IC98 578 aa24.09■■□□□ 1.45
SNF8-209ENST00000510558 ANO7Q6IWH7 933 aa24.09■■□□□ 1.45
SNF8-209ENST00000510558 LCLAT1Q6UWP7 414 aa24.09■■□□□ 1.45
SNF8-209ENST00000510558 TMEM92Q6UXU6 159 aa24.09■■□□□ 1.45
SNF8-209ENST00000510558 RRAGAQ7L523 313 aa24.09■■□□□ 1.45
SNF8-209ENST00000510558 ERMP1Q7Z2K6 904 aa24.09■■□□□ 1.45
SNF8-209ENST00000510558 RASSF3Q86WH2 238 aa24.09■■□□□ 1.45
SNF8-209ENST00000510558 NDRG1Q92597 394 aaKnown RBP24.09■■□□□ 1.45
SNF8-209ENST00000510558 LOXL4Q96JB6 756 aa24.09■■□□□ 1.45
SNF8-209ENST00000510558 XPO6Q96QU8 1125 aaKnown RBP24.09■■□□□ 1.45
SNF8-209ENST00000510558 ZDHHC4Q9NPG8 344 aa24.09■■□□□ 1.45
SNF8-209ENST00000510558 DLL3Q9NYJ7 618 aa24.09■■□□□ 1.45
SNF8-209ENST00000510558 MARCH2Q9P0N8 246 aa24.09■■□□□ 1.45
SNF8-209ENST00000510558 RWDD2AQ9UIY3 292 aa24.09■■□□□ 1.45
SNF8-209ENST00000510558 STRIP2Q9ULQ0 834 aa24.09■■□□□ 1.45
SNF8-209ENST00000510558 KLKB1P03952 638 aa24.08■■□□□ 1.45
SNF8-209ENST00000510558 HMBSP08397 361 aa24.08■■□□□ 1.45
SNF8-209ENST00000510558 HNRNPLP14866 589 aaKnown RBP eCLIP24.08■■□□□ 1.45
SNF8-209ENST00000510558 GCNT1Q02742 428 aa24.08■■□□□ 1.45
SNF8-209ENST00000510558 CSRP2Q16527 193 aa24.08■■□□□ 1.45
SNF8-209ENST00000510558 EOGTQ5NDL2 527 aa24.08■■□□□ 1.45
SNF8-209ENST00000510558 C10orf76Q5T2E6 689 aa24.08■■□□□ 1.45
SNF8-209ENST00000510558 NUDT18Q6ZVK8 323 aa24.08■■□□□ 1.45
SNF8-209ENST00000510558 RBBP8NLQ8NC74 664 aaPredicted RBP24.08■■□□□ 1.45
SNF8-209ENST00000510558 KCTD13Q8WZ19 329 aa24.08■■□□□ 1.45
SNF8-209ENST00000510558 ZC3H10Q96K80 434 aaKnown RBP24.08■■□□□ 1.45
SNF8-209ENST00000510558 CNOT6LQ96LI5 555 aaKnown RBP24.08■■□□□ 1.45
SNF8-209ENST00000510558 IPO9Q96P70 1041 aaKnown RBP24.08■■□□□ 1.45
SNF8-209ENST00000510558 TPSD1Q9BZJ3 242 aa24.08■■□□□ 1.45
SNF8-209ENST00000510558 ZNF510Q9Y2H8 683 aa24.08■■□□□ 1.45
SNF8-209ENST00000510558 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.08■■□□□ 1.45
SNF8-209ENST00000510558 EPN2O95208 641 aa24.07■■□□□ 1.44
SNF8-209ENST00000510558 BRD2P25440 801 aaKnown RBP24.07■■□□□ 1.44
SNF8-209ENST00000510558 CORO1AP31146 461 aaKnown RBP24.07■■□□□ 1.44
SNF8-209ENST00000510558 CNGA2Q16280 664 aa24.07■■□□□ 1.44
SNF8-209ENST00000510558 PLK5Q496M5 336 aa24.07■■□□□ 1.44
SNF8-209ENST00000510558 SIX6OS1Q8N1H7 587 aa24.07■■□□□ 1.44
SNF8-209ENST00000510558 MDGA1Q8NFP4 955 aa24.07■■□□□ 1.44
SNF8-209ENST00000510558 KCNV2Q8TDN2 545 aa24.07■■□□□ 1.44
SNF8-209ENST00000510558 ZSWIM1Q9BR11 485 aa24.07■■□□□ 1.44
SNF8-209ENST00000510558 DCLK3Q9C098 648 aa24.07■■□□□ 1.44
SNF8-209ENST00000510558 INTS2Q9H0H0 1204 aaKnown RBP24.07■■□□□ 1.44
SNF8-209ENST00000510558 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.07■■□□□ 1.44
SNF8-209ENST00000510558 THADAQ6YHU6 1953 aa24.06■■□□□ 1.44
SNF8-209ENST00000510558 SLC12A8A0AV02 714 aa24.06■■□□□ 1.44
SNF8-209ENST00000510558 DCLK1O15075 740 aa24.06■■□□□ 1.44
SNF8-209ENST00000510558 ADAM23O75077 832 aa24.06■■□□□ 1.44
SNF8-209ENST00000510558 ALDH1A2O94788 518 aa24.06■■□□□ 1.44
SNF8-209ENST00000510558 SDHBP21912 280 aa24.06■■□□□ 1.44
SNF8-209ENST00000510558 ZNF132P52740 706 aa24.06■■□□□ 1.44
SNF8-209ENST00000510558 FOXK2Q01167 660 aa24.06■■□□□ 1.44
SNF8-209ENST00000510558 STILQ15468 1287 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms