RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 PARD3BQ8TEW8 1205 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 ADAMTS14Q8WXS8 1223 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 ELMO3Q96BJ8 720 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 SLC6A17Q9H1V8 727 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 SLC39A2Q9NP94 309 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 CYLDQ9NQC7 956 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 SCML2Q9UQR0 700 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 STON1Q9Y6Q2 735 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 DENND4CQ5VZ89 1909 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 CEP295Q9C0D2 2601 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 FRYQ5TBA9 3013 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 TCHHQ07283 1943 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 A0A1B0GTW7 788 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 PVALEFA0A1B0GWK0 134 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 LRRIQ3A6PVS8 624 aaPredicted RBP10.98□□□□□ -0.65
DDX41-211ENST00000510171 WASH3PC4AMC7 463 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 CUTAO60888 179 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 VNN1O95497 513 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 RPN1P04843 607 aaKnown RBP10.98□□□□□ -0.65
DDX41-211ENST00000510171 FTH1P19P0C7X4 201 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 FAM200BP0CF97 657 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 TRIM21P19474 475 aaKnown RBP10.98□□□□□ -0.65
DDX41-211ENST00000510171 ZNF132P52740 706 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 NDST1P52848 882 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 CLDN10P78369 228 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 EHHADHQ08426 723 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 ORC1Q13415 861 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 STARD3Q14849 445 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 ATL3Q6DD88 541 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 KLHDC10Q6PID8 442 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 METTL3Q86U44 580 aaKnown RBP10.98□□□□□ -0.65
DDX41-211ENST00000510171 UNC93AQ86WB7 457 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 PNPLA1Q8N8W4 532 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 C12orf29Q8N999 325 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 SPRYD3Q8NCJ5 442 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 DNASE2BQ8WZ79 361 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 BHMTQ93088 406 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 TOE1Q96GM8 510 aaKnown RBP10.98□□□□□ -0.65
DDX41-211ENST00000510171 BLZF1Q9H2G9 400 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 MAGEF1Q9HAY2 307 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 CD93Q9NPY3 652 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 ITM2CQ9NQX7 267 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 OSER1Q9NX31 292 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 TFIP11Q9UBB9 837 aaKnown RBP10.98□□□□□ -0.65
DDX41-211ENST00000510171 DNMT3LQ9UJW3 386 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 APOBEC2Q9Y235 224 aaKnown RBP10.98□□□□□ -0.65
DDX41-211ENST00000510171 OBSL1O75147 1896 aa10.98□□□□□ -0.65
DDX41-211ENST00000510171 ZNF638Q14966 1978 aaKnown RBP10.97□□□□□ -0.65
DDX41-211ENST00000510171 THADAQ6YHU6 1953 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 NPC1O15118 1278 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 POLR2DO15514 142 aaKnown RBP10.97□□□□□ -0.65
DDX41-211ENST00000510171 SYNCRIPO60506 623 aaKnown RBP10.97□□□□□ -0.65
DDX41-211ENST00000510171 ZSCAN22P10073 491 aaPredicted RBP10.97□□□□□ -0.65
DDX41-211ENST00000510171 NCAM1P13591 858 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 RARGP13631 454 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 ACO1P21399 889 aaKnown RBP10.97□□□□□ -0.65
DDX41-211ENST00000510171 ADORA2BP29275 332 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 CASP1P29466 404 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 GRIK2Q13002 908 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 FUT11Q495W5 492 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 C10orf120Q5SQS8 335 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 C19orf48Q6RUI8 117 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 SHC4Q6S5L8 630 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 CCNI2Q6ZMN8 369 aaPredicted RBP10.97□□□□□ -0.65
DDX41-211ENST00000510171 Q6ZNB5 142 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 TADA2BQ86TJ2 420 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 CADM4Q8NFZ8 388 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 SETD7Q8WTS6 366 aaKnown RBP10.97□□□□□ -0.65
DDX41-211ENST00000510171 TAF4BQ92750 862 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 JAKMIP2Q96AA8 810 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 HNRNPABQ99729 332 aaKnown RBP10.97□□□□□ -0.65
DDX41-211ENST00000510171 MIR1-1HGQ9H1L0 117 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 CCDC86Q9H6F5 360 aaKnown RBP10.97□□□□□ -0.65
DDX41-211ENST00000510171 PRDM16Q9HAZ2 1276 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 FAM49BQ9NUQ9 324 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 WSB2Q9NYS7 404 aaPredicted RBP10.97□□□□□ -0.65
DDX41-211ENST00000510171 PLK2Q9NYY3 685 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 FBXO10Q9UK96 956 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 NUDT5Q9UKK9 219 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 ZNF510Q9Y2H8 683 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 SLC27A6Q9Y2P4 619 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 NFE2L3Q9Y4A8 694 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 GPSM3Q9Y4H4 160 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 PCDHA5Q9Y5H7 936 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 FAM208BQ5VWN6 2430 aa10.97□□□□□ -0.65
DDX41-211ENST00000510171 A0A1W2PQH9 124 aa10.96□□□□□ -0.65
DDX41-211ENST00000510171 MEI4A8MW99 385 aa10.96□□□□□ -0.65
DDX41-211ENST00000510171 HHLA1C9JL84 531 aa10.96□□□□□ -0.65
DDX41-211ENST00000510171 MDM4O15151 490 aa10.96□□□□□ -0.65
DDX41-211ENST00000510171 CYP26A1O43174 497 aa10.96□□□□□ -0.65
DDX41-211ENST00000510171 F13A1P00488 732 aa10.96□□□□□ -0.65
DDX41-211ENST00000510171 OXTRP30559 389 aa10.96□□□□□ -0.65
DDX41-211ENST00000510171 E2F5Q15329 346 aa10.96□□□□□ -0.65
DDX41-211ENST00000510171 ZACNQ401N2 412 aa10.96□□□□□ -0.65
DDX41-211ENST00000510171 GPRIN1Q7Z2K8 1008 aa10.96□□□□□ -0.65
DDX41-211ENST00000510171 GLRX5Q86SX6 157 aa10.96□□□□□ -0.65
DDX41-211ENST00000510171 SLC9A9Q8IVB4 645 aa10.96□□□□□ -0.65
DDX41-211ENST00000510171 UCMAQ8WVF2 138 aa10.96□□□□□ -0.65
DDX41-211ENST00000510171 CYFIP2Q96F07 1278 aa10.96□□□□□ -0.65
DDX41-211ENST00000510171 GPR174Q9BXC1 333 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms