RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 CPXM1Q96SM3 734 aa14.22□□□□□ -0.13
SNF8-206ENST00000509989 SLC4A5Q9BY07 1137 aa14.22□□□□□ -0.13
SNF8-206ENST00000509989 DNAI2Q9GZS0 605 aa14.22□□□□□ -0.13
SNF8-206ENST00000509989 CHRDQ9H2X0 955 aa14.22□□□□□ -0.13
SNF8-206ENST00000509989 CBX8Q9HC52 389 aa14.22□□□□□ -0.13
SNF8-206ENST00000509989 ZDHHC4Q9NPG8 344 aa14.22□□□□□ -0.13
SNF8-206ENST00000509989 ST7Q9NRC1 585 aa14.22□□□□□ -0.13
SNF8-206ENST00000509989 DNMT3LQ9UJW3 386 aa14.22□□□□□ -0.13
SNF8-206ENST00000509989 SH3BP1Q9Y3L3 701 aa14.22□□□□□ -0.13
SNF8-206ENST00000509989 MYO15AQ9UKN7 3530 aa14.21□□□□□ -0.13
SNF8-206ENST00000509989 SLC12A8A0AV02 714 aa14.21□□□□□ -0.13
SNF8-206ENST00000509989 LRRC10BA6NIK2 292 aa14.21□□□□□ -0.13
SNF8-206ENST00000509989 LGALS16A8MUM7 142 aa14.21□□□□□ -0.13
SNF8-206ENST00000509989 F8VZ95 297 aa14.21□□□□□ -0.13
SNF8-206ENST00000509989 CHRM1P11229 460 aaPredicted RBP14.21□□□□□ -0.13
SNF8-206ENST00000509989 RPS9P46781 194 aaKnown RBP14.21□□□□□ -0.13
SNF8-206ENST00000509989 ZNF165P49910 485 aa14.21□□□□□ -0.13
SNF8-206ENST00000509989 PDCLQ13371 301 aa14.21□□□□□ -0.13
SNF8-206ENST00000509989 STILQ15468 1287 aa14.21□□□□□ -0.13
SNF8-206ENST00000509989 ZSCAN23Q3MJ62 389 aa14.21□□□□□ -0.13
SNF8-206ENST00000509989 C2CD6Q53TS8 623 aa14.21□□□□□ -0.13
SNF8-206ENST00000509989 SYPL2Q5VXT5 272 aa14.21□□□□□ -0.13
SNF8-206ENST00000509989 BTBD8Q5XKL5 378 aa14.21□□□□□ -0.13
SNF8-206ENST00000509989 HTR3DQ70Z44 454 aa14.21□□□□□ -0.13
SNF8-206ENST00000509989 LUZP1Q86V48 1076 aa14.21□□□□□ -0.13
SNF8-206ENST00000509989 PHTF2Q8N3S3 785 aa14.21□□□□□ -0.13
SNF8-206ENST00000509989 ZNF276Q8N554 614 aa14.21□□□□□ -0.13
SNF8-206ENST00000509989 ATOH1Q92858 354 aaPredicted RBP14.21□□□□□ -0.13
SNF8-206ENST00000509989 BHMTQ93088 406 aa14.21□□□□□ -0.13
SNF8-206ENST00000509989 NELL2Q99435 816 aa14.21□□□□□ -0.13
SNF8-206ENST00000509989 P2RY13Q9BPV8 354 aa14.21□□□□□ -0.13
SNF8-206ENST00000509989 CNGB3Q9NQW8 809 aa14.21□□□□□ -0.13
SNF8-206ENST00000509989 MARCH2Q9P0N8 246 aa14.21□□□□□ -0.13
SNF8-206ENST00000509989 NAALADL1Q9UQQ1 740 aa14.21□□□□□ -0.13
SNF8-206ENST00000509989 R4GN57 208 aa14.21□□□□□ -0.13
SNF8-206ENST00000509989 DMDP11532 3685 aa14.21□□□□□ -0.14
SNF8-206ENST00000509989 GFPT2O94808 682 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 NFATC1O95644 943 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 ERBB2P04626 1255 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 SP9P0CG40 484 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 RALAP11233 206 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 TDGF1P13385 188 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 CHRNB2P17787 502 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 CDK11BP21127 795 aaKnown RBP14.2□□□□□ -0.14
SNF8-206ENST00000509989 PLA2G5P39877 138 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 PSEN1P49768 467 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 PTPN5P54829 565 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 JAM2P57087 298 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 SLC8A3P57103 927 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 UBXN1Q04323 297 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 KDSRQ06136 332 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 PTPN20Q4JDL3 420 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 EMC10Q5UCC4 262 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 KLHDC10Q6PID8 442 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 TPGS1Q6ZTW0 290 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 FMNL3Q8IVF7 1028 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 SCML4Q8N228 414 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 ADAM32Q8TC27 787 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 CD101Q93033 1021 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 HSFY1Q96LI6 401 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 BPIFA3Q9BQP9 254 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 PLK2Q9NYY3 685 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 HCN2Q9UL51 889 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 CLEC4EQ9ULY5 219 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 PCDHGC3Q9UN70 934 aa14.2□□□□□ -0.14
SNF8-206ENST00000509989 MRPS17Q9Y2R5 130 aaKnown RBP14.2□□□□□ -0.14
SNF8-206ENST00000509989 K7EQS6 105 aa14.19□□□□□ -0.14
SNF8-206ENST00000509989 RNF40O75150 1001 aa14.19□□□□□ -0.14
SNF8-206ENST00000509989 GRAP2O75791 330 aa14.19□□□□□ -0.14
SNF8-206ENST00000509989 LTFP02788 710 aa14.19□□□□□ -0.14
SNF8-206ENST00000509989 MMEP08473 750 aa14.19□□□□□ -0.14
SNF8-206ENST00000509989 ADH5P11766 374 aa14.19□□□□□ -0.14
SNF8-206ENST00000509989 CYP11B1P15538 503 aa14.19□□□□□ -0.14
SNF8-206ENST00000509989 CORO1AP31146 461 aaKnown RBP14.19□□□□□ -0.14
SNF8-206ENST00000509989 SEC13P55735 322 aa14.19□□□□□ -0.14
SNF8-206ENST00000509989 CSTF1Q05048 431 aaKnown RBP14.19□□□□□ -0.14
SNF8-206ENST00000509989 PTK2Q05397 1052 aa14.19□□□□□ -0.14
SNF8-206ENST00000509989 RSRC2Q7L4I2 434 aaKnown RBP14.19□□□□□ -0.14
SNF8-206ENST00000509989 TMEM110Q86TL2 294 aa14.19□□□□□ -0.14
SNF8-206ENST00000509989 DDX42Q86XP3 938 aaKnown RBP eCLIP14.19□□□□□ -0.14
SNF8-206ENST00000509989 DENND1CQ8IV53 801 aa14.19□□□□□ -0.14
SNF8-206ENST00000509989 ETFBKMTQ8IXQ9 262 aa14.19□□□□□ -0.14
SNF8-206ENST00000509989 MYEOVQ96EZ4 313 aa14.19□□□□□ -0.14
SNF8-206ENST00000509989 STK33Q9BYT3 514 aa14.19□□□□□ -0.14
SNF8-206ENST00000509989 ADAM33Q9BZ11 813 aa14.19□□□□□ -0.14
SNF8-206ENST00000509989 KCNH6Q9H252 994 aa14.19□□□□□ -0.14
SNF8-206ENST00000509989 SPHK2Q9NRA0 654 aa14.19□□□□□ -0.14
SNF8-206ENST00000509989 NOCTQ9UK39 431 aaKnown RBP14.19□□□□□ -0.14
SNF8-206ENST00000509989 AGO1Q9UL18 857 aaKnown RBP14.19□□□□□ -0.14
SNF8-206ENST00000509989 GOLGA6L7A0A1B0GV03 622 aa14.18□□□□□ -0.14
SNF8-206ENST00000509989 MED7O43513 233 aa14.18□□□□□ -0.14
SNF8-206ENST00000509989 HNRNPLP14866 589 aaKnown RBP eCLIP14.18□□□□□ -0.14
SNF8-206ENST00000509989 SGSHP51688 502 aa14.18□□□□□ -0.14
SNF8-206ENST00000509989 ANO4Q32M45 955 aa14.18□□□□□ -0.14
SNF8-206ENST00000509989 FKBP15Q5T1M5 1219 aa14.18□□□□□ -0.14
SNF8-206ENST00000509989 MSANTD2Q6P1R3 559 aa14.18□□□□□ -0.14
SNF8-206ENST00000509989 TOGARAM2Q6ZUX3 1019 aa14.18□□□□□ -0.14
SNF8-206ENST00000509989 FAM183BPQ6ZVS7 135 aa14.18□□□□□ -0.14
SNF8-206ENST00000509989 ARHGAP18Q8N392 663 aa14.18□□□□□ -0.14
SNF8-206ENST00000509989 OLIG1Q8TAK6 271 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms