RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 GBP1P32455 592 aa15.5■□□□□ 0.07
RNF4-213ENST00000509388 MATKP42679 507 aa15.5■□□□□ 0.07
RNF4-213ENST00000509388 SLC7A9P82251 487 aa15.5■□□□□ 0.07
RNF4-213ENST00000509388 COG7P83436 770 aa15.5■□□□□ 0.07
RNF4-213ENST00000509388 FAM78AQ5JUQ0 283 aa15.5■□□□□ 0.07
RNF4-213ENST00000509388 RAD9BQ6WBX8 426 aa15.5■□□□□ 0.07
RNF4-213ENST00000509388 MTSS1LQ765P7 747 aa15.5■□□□□ 0.07
RNF4-213ENST00000509388 CELF5Q8N6W0 485 aaKnown RBP15.5■□□□□ 0.07
RNF4-213ENST00000509388 E2F7Q96AV8 911 aa15.5■□□□□ 0.07
RNF4-213ENST00000509388 ASB2Q96Q27 587 aa15.5■□□□□ 0.07
RNF4-213ENST00000509388 SLC2A13Q96QE2 648 aa15.5■□□□□ 0.07
RNF4-213ENST00000509388 SLC22A12Q96S37 553 aa15.5■□□□□ 0.07
RNF4-213ENST00000509388 SMG9Q9H0W8 520 aaKnown RBP15.5■□□□□ 0.07
RNF4-213ENST00000509388 FAM204AQ9H8W3 233 aa15.5■□□□□ 0.07
RNF4-213ENST00000509388 TDP1Q9NUW8 608 aa15.5■□□□□ 0.07
RNF4-213ENST00000509388 SMPD4Q9NXE4 827 aa15.5■□□□□ 0.07
RNF4-213ENST00000509388 EPS15L1Q9UBC2 864 aa15.5■□□□□ 0.07
RNF4-213ENST00000509388 PRKAG3Q9UGI9 489 aa15.5■□□□□ 0.07
RNF4-213ENST00000509388 SFMBT1Q9UHJ3 866 aa15.5■□□□□ 0.07
RNF4-213ENST00000509388 PCDHA13Q9Y5I0 950 aa15.5■□□□□ 0.07
RNF4-213ENST00000509388 CPQQ9Y646 472 aa15.5■□□□□ 0.07
RNF4-213ENST00000509388 SLC12A8A0AV02 714 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 C2CD4DB7Z1M9 353 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 MDM4O15151 490 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 OLFM2O95897 454 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 FYNP06241 537 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 TMEM253P0C7T8 217 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 PDGFRAP16234 1089 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 WEE1P30291 646 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 SDC4P31431 198 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 KPNA1P52294 538 aaPredicted RBP15.49■□□□□ 0.07
RNF4-213ENST00000509388 MAMLD1Q13495 774 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 MTF1Q14872 753 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 SYPL2Q5VXT5 272 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 PLEKHA7Q6IQ23 1121 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 ARCQ7LC44 396 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 KIAA1328Q86T90 577 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 DDX42Q86XP3 938 aaKnown RBP eCLIP15.49■□□□□ 0.07
RNF4-213ENST00000509388 TMEM139Q8IV31 216 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 EMC1Q8N766 993 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 DQX1Q8TE96 717 aaKnown RBP15.49■□□□□ 0.07
RNF4-213ENST00000509388 RXFP2Q8WXD0 754 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 KHSRPQ92945 711 aaKnown RBP eCLIP15.49■□□□□ 0.07
RNF4-213ENST00000509388 ASB16Q96NS5 453 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 SERPINB11Q96P15 392 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 MCEEQ96PE7 176 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 KIF9Q9HAQ2 790 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 CTTNBP2NLQ9P2B4 639 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 TMEM59LQ9UK28 342 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 INTUQ9ULD6 942 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 NENFQ9UMX5 172 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 ARHGAP26Q9UNA1 814 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 SH3BP1Q9Y3L3 701 aa15.49■□□□□ 0.07
RNF4-213ENST00000509388 SYNJ2BP-COX16A0A087WUM0 186 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 ZNF263O14978 683 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 LCA5LO95447 670 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 GJB6O95452 261 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 TRUB2O95900 331 aaKnown RBP15.48■□□□□ 0.07
RNF4-213ENST00000509388 CYP1A2P05177 515 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 HMBSP08397 361 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 GPD1P21695 349 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 RFC1P35251 1148 aaPredicted RBP15.48■□□□□ 0.07
RNF4-213ENST00000509388 FLT3P36888 993 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 VIPR2P41587 438 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 SULT1E1P49888 294 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 CC2D1AQ6P1N0 951 aaPredicted RBP15.48■□□□□ 0.07
RNF4-213ENST00000509388 MSANTD2Q6P1R3 559 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 SND1Q7KZF4 910 aaKnown RBP eCLIP15.48■□□□□ 0.07
RNF4-213ENST00000509388 ADHFE1Q8IWW8 467 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 YAF2Q8IY57 180 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 ZDHHC14Q8IZN3 488 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 JOSD2Q8TAC2 188 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 ADAM32Q8TC27 787 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 USP13Q92995 863 aaPredicted RBP15.48■□□□□ 0.07
RNF4-213ENST00000509388 RNF34Q969K3 372 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 DDX23Q9BUQ8 820 aaKnown RBP15.48■□□□□ 0.07
RNF4-213ENST00000509388 NUP85Q9BW27 656 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 PACSIN1Q9BY11 444 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 SMOC2Q9H3U7 446 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 GKN1Q9NS71 199 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 TMEM51Q9NW97 253 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 COX16Q9P0S2 106 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 LIMD1Q9UGP4 676 aa15.48■□□□□ 0.07
RNF4-213ENST00000509388 LSM7Q9UK45 103 aaKnown RBP15.48■□□□□ 0.07
RNF4-213ENST00000509388 M0QYT0 321 aa15.47■□□□□ 0.07
RNF4-213ENST00000509388 LEFTY2O00292 366 aa15.47■□□□□ 0.07
RNF4-213ENST00000509388 PRAMEF12O95522 483 aa15.47■□□□□ 0.07
RNF4-213ENST00000509388 F9P00740 461 aa15.47■□□□□ 0.07
RNF4-213ENST00000509388 IRF1P10914 325 aa15.47■□□□□ 0.07
RNF4-213ENST00000509388 TBX4P57082 545 aa15.47■□□□□ 0.07
RNF4-213ENST00000509388 NME3Q13232 169 aa15.47■□□□□ 0.07
RNF4-213ENST00000509388 SLC25A52Q3SY17 297 aa15.47■□□□□ 0.07
RNF4-213ENST00000509388 TANGO2Q6ICL3 276 aa15.47■□□□□ 0.07
RNF4-213ENST00000509388 PARM1Q6UWI2 310 aa15.47■□□□□ 0.07
RNF4-213ENST00000509388 RHOT2Q8IXI1 618 aa15.47■□□□□ 0.07
RNF4-213ENST00000509388 ACRBPQ8NEB7 543 aa15.47■□□□□ 0.07
RNF4-213ENST00000509388 ST13P5Q8NFI4 369 aaPredicted RBP15.47■□□□□ 0.07
RNF4-213ENST00000509388 SH3RF2Q8TEC5 729 aa15.47■□□□□ 0.07
RNF4-213ENST00000509388 NXPE3Q969Y0 559 aa15.47■□□□□ 0.07
RNF4-213ENST00000509388 ELSPBP1Q96BH3 223 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms