RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 Q6ZNB5 142 aa16.23■□□□□ 0.19
SMAD5-205ENST00000509297 TTC30AQ86WT1 665 aa16.23■□□□□ 0.19
SMAD5-205ENST00000509297 SYT12Q8IV01 421 aa16.23■□□□□ 0.19
SMAD5-205ENST00000509297 HMGB4Q8WW32 186 aa16.23■□□□□ 0.19
SMAD5-205ENST00000509297 BBS2Q9BXC9 721 aa16.23■□□□□ 0.19
SMAD5-205ENST00000509297 TMEM9BQ9NQ34 198 aa16.23■□□□□ 0.19
SMAD5-205ENST00000509297 DNAJC17Q9NVM6 304 aaKnown RBP16.23■□□□□ 0.19
SMAD5-205ENST00000509297 MBD1Q9UIS9 605 aaPredicted RBP16.23■□□□□ 0.19
SMAD5-205ENST00000509297 MAPK8IP1Q9UQF2 711 aa16.23■□□□□ 0.19
SMAD5-205ENST00000509297 MYOFQ9NZM1 2061 aa16.23■□□□□ 0.19
SMAD5-205ENST00000509297 MAP1BP46821 2468 aaKnown RBP16.23■□□□□ 0.19
SMAD5-205ENST00000509297 A0A1W2PQF6 199 aa16.22■□□□□ 0.19
SMAD5-205ENST00000509297 A0A1W2PQH9 124 aa16.22■□□□□ 0.19
SMAD5-205ENST00000509297 ZNF202O95125 648 aa16.22■□□□□ 0.19
SMAD5-205ENST00000509297 CD58P19256 250 aa16.22■□□□□ 0.19
SMAD5-205ENST00000509297 CSRP1P21291 193 aaKnown RBP16.22■□□□□ 0.19
SMAD5-205ENST00000509297 LMAN2Q12907 356 aa16.22■□□□□ 0.19
SMAD5-205ENST00000509297 SCD5Q86SK9 330 aa16.22■□□□□ 0.19
SMAD5-205ENST00000509297 FBXL13Q8NEE6 735 aa16.22■□□□□ 0.19
SMAD5-205ENST00000509297 RLN3Q8WXF3 142 aa16.22■□□□□ 0.19
SMAD5-205ENST00000509297 CHAMP1Q96JM3 812 aa16.22■□□□□ 0.19
SMAD5-205ENST00000509297 GABRG3Q99928 467 aa16.22■□□□□ 0.19
SMAD5-205ENST00000509297 CD248Q9HCU0 757 aa16.22■□□□□ 0.19
SMAD5-205ENST00000509297 FBXO10Q9UK96 956 aa16.22■□□□□ 0.19
SMAD5-205ENST00000509297 ZNF510Q9Y2H8 683 aa16.22■□□□□ 0.19
SMAD5-205ENST00000509297 NUP205Q92621 2012 aa16.22■□□□□ 0.19
SMAD5-205ENST00000509297 THADAQ6YHU6 1953 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 NEDD8-MDP1E9PL57 170 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 GFRA2O00451 464 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 CDX4O14627 284 aaPredicted RBP16.21■□□□□ 0.19
SMAD5-205ENST00000509297 TRIM24O15164 1050 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 CISD3P0C7P0 127 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 RALAP11233 206 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 HOXB2P14652 356 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 GABRG2P18507 467 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 KCNA4P22459 653 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 PTGER3P43115 390 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 MXI1P50539 228 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 IRX4P78413 519 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 COG7P83436 770 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 COBLL1Q53SF7 1204 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 C10orf120Q5SQS8 335 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 PPP1R26Q5T8A7 1209 aaPredicted RBP16.21■□□□□ 0.19
SMAD5-205ENST00000509297 ARHGAP17Q68EM7 881 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 SDE2Q6IQ49 451 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 SLC36A4Q6YBV0 504 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 ARHGAP18Q8N392 663 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 PIGKQ92643 395 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 GOLPH3LQ9H4A5 285 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 ZDHHC4Q9NPG8 344 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 RAB20Q9NX57 234 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 NAGPAQ9UK23 515 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 PILRBQ9UKJ0 227 aa16.21■□□□□ 0.19
SMAD5-205ENST00000509297 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 PATE3B3GLJ2 98 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 CETN3O15182 167 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 ZBTB24O43167 697 aaPredicted RBP16.2■□□□□ 0.18
SMAD5-205ENST00000509297 AP5Z1O43299 807 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 ZNF217O75362 1048 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 STC2O76061 302 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 PENKP01210 267 aaPredicted RBP16.2■□□□□ 0.18
SMAD5-205ENST00000509297 CEACAM1P13688 526 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 RAB41Q5JT25 222 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 LYSMD4Q5XG99 296 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 EGFLAMQ63HQ2 1017 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 PSAPL1Q6NUJ1 521 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 SLC23A3Q6PIS1 610 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 MIB1Q86YT6 1006 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 TMEFF1Q8IYR6 380 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 CHPFQ8IZ52 775 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 PGBD3Q8N328 593 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 FRMD1Q8N878 549 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 SLC4A11Q8NBS3 891 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 SEMA4DQ92854 862 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 JAKMIP2Q96AA8 810 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 TMEM176AQ96HP8 235 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 HEXIM2Q96MH2 286 aaKnown RBP16.2■□□□□ 0.18
SMAD5-205ENST00000509297 NUSAP1Q9BXS6 441 aaKnown RBP16.2■□□□□ 0.18
SMAD5-205ENST00000509297 DCLK3Q9C098 648 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 CISHQ9NSE2 258 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 RMND1Q9NWS8 449 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 CALCOCO1Q9P1Z2 691 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 SLC27A6Q9Y2P4 619 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 COQ4Q9Y3A0 265 aa16.2■□□□□ 0.18
SMAD5-205ENST00000509297 FRYQ5TBA9 3013 aa16.19■□□□□ 0.18
SMAD5-205ENST00000509297 PRRT4C9JH25 899 aa16.19■□□□□ 0.18
SMAD5-205ENST00000509297 NPC1O15118 1278 aa16.19■□□□□ 0.18
SMAD5-205ENST00000509297 KLKB1P03952 638 aa16.19■□□□□ 0.18
SMAD5-205ENST00000509297 EPB41P11171 864 aaKnown RBP16.19■□□□□ 0.18
SMAD5-205ENST00000509297 CHKAP35790 457 aa16.19■□□□□ 0.18
SMAD5-205ENST00000509297 DGKGP49619 791 aa16.19■□□□□ 0.18
SMAD5-205ENST00000509297 NOVA1P51513 510 aaKnown RBP16.19■□□□□ 0.18
SMAD5-205ENST00000509297 ZNF132P52740 706 aa16.19■□□□□ 0.18
SMAD5-205ENST00000509297 RAD23BP54727 409 aa16.19■□□□□ 0.18
SMAD5-205ENST00000509297 ST3GAL2Q16842 350 aa16.19■□□□□ 0.18
SMAD5-205ENST00000509297 TRIM61Q5EBN2 209 aa16.19■□□□□ 0.18
SMAD5-205ENST00000509297 TPGS1Q6ZTW0 290 aa16.19■□□□□ 0.18
SMAD5-205ENST00000509297 RABEPKQ7Z6M1 372 aa16.19■□□□□ 0.18
SMAD5-205ENST00000509297 ZC3H3Q8IXZ2 948 aaKnown RBP16.19■□□□□ 0.18
SMAD5-205ENST00000509297 ANKRD52Q8NB46 1076 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms