RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 MIS12Q9H081 205 aa17.75■□□□□ 0.43
CLDND1-219ENST00000508659 PLCB1Q9NQ66 1216 aa17.75■□□□□ 0.43
CLDND1-219ENST00000508659 PRMT8Q9NR22 394 aaPredicted RBP17.75■□□□□ 0.43
CLDND1-219ENST00000508659 ABCC13Q9NSE7 274 aa17.75■□□□□ 0.43
CLDND1-219ENST00000508659 FAM207AQ9NSI2 230 aaPredicted RBP17.75■□□□□ 0.43
CLDND1-219ENST00000508659 LIMA1Q9UHB6 759 aaKnown RBP17.75■□□□□ 0.43
CLDND1-219ENST00000508659 FBXO4Q9UKT5 387 aa17.75■□□□□ 0.43
CLDND1-219ENST00000508659 CEP83Q9Y592 693 aa17.75■□□□□ 0.43
CLDND1-219ENST00000508659 SLC12A8A0AV02 714 aa17.74■□□□□ 0.43
CLDND1-219ENST00000508659 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.74■□□□□ 0.43
CLDND1-219ENST00000508659 F8VZ95 297 aa17.74■□□□□ 0.43
CLDND1-219ENST00000508659 FOXN3O00409 490 aaPredicted RBP17.74■□□□□ 0.43
CLDND1-219ENST00000508659 GREM1O60565 184 aa17.74■□□□□ 0.43
CLDND1-219ENST00000508659 STC2O76061 302 aa17.74■□□□□ 0.43
CLDND1-219ENST00000508659 EGFP01133 1207 aa17.74■□□□□ 0.43
CLDND1-219ENST00000508659 LTFP02788 710 aa17.74■□□□□ 0.43
CLDND1-219ENST00000508659 HMBSP08397 361 aa17.74■□□□□ 0.43
CLDND1-219ENST00000508659 ZNF165P49910 485 aa17.74■□□□□ 0.43
CLDND1-219ENST00000508659 GALK1P51570 392 aa17.74■□□□□ 0.43
CLDND1-219ENST00000508659 BPIFB4P59827 614 aa17.74■□□□□ 0.43
CLDND1-219ENST00000508659 GAD2Q05329 585 aa17.74■□□□□ 0.43
CLDND1-219ENST00000508659 DPY19L2P1Q6NXN4 242 aa17.74■□□□□ 0.43
CLDND1-219ENST00000508659 SLC47A2Q86VL8 602 aa17.74■□□□□ 0.43
CLDND1-219ENST00000508659 FAM71AQ8IYT1 594 aa17.74■□□□□ 0.43
CLDND1-219ENST00000508659 SPEM1Q8N4L4 309 aa17.74■□□□□ 0.43
CLDND1-219ENST00000508659 CLEC4CQ8WTT0 213 aa17.74■□□□□ 0.43
CLDND1-219ENST00000508659 STK32AQ8WU08 396 aa17.74■□□□□ 0.43
CLDND1-219ENST00000508659 PLD4Q96BZ4 506 aa17.74■□□□□ 0.43
CLDND1-219ENST00000508659 NOX5Q96PH1 765 aa17.74■□□□□ 0.43
CLDND1-219ENST00000508659 SPHK2Q9NRA0 654 aa17.74■□□□□ 0.43
CLDND1-219ENST00000508659 PCDHGC3Q9UN70 934 aa17.74■□□□□ 0.43
CLDND1-219ENST00000508659 F5P12259 2224 aa17.74■□□□□ 0.43
CLDND1-219ENST00000508659 SMTNL1A8MU46 457 aa17.73■□□□□ 0.43
CLDND1-219ENST00000508659 E5RJQ4 531 aa17.73■□□□□ 0.43
CLDND1-219ENST00000508659 RNF40O75150 1001 aa17.73■□□□□ 0.43
CLDND1-219ENST00000508659 CORO1AP31146 461 aaKnown RBP17.73■□□□□ 0.43
CLDND1-219ENST00000508659 KRT9P35527 623 aa17.73■□□□□ 0.43
CLDND1-219ENST00000508659 OPRD1P41143 372 aa17.73■□□□□ 0.43
CLDND1-219ENST00000508659 EIF2DP41214 584 aaKnown RBP17.73■□□□□ 0.43
CLDND1-219ENST00000508659 KLK7P49862 253 aa17.73■□□□□ 0.43
CLDND1-219ENST00000508659 CSTF1Q05048 431 aaKnown RBP17.73■□□□□ 0.43
CLDND1-219ENST00000508659 GAB4Q2WGN9 574 aa17.73■□□□□ 0.43
CLDND1-219ENST00000508659 ANO4Q32M45 955 aa17.73■□□□□ 0.43
CLDND1-219ENST00000508659 FBXO43Q4G163 708 aa17.73■□□□□ 0.43
CLDND1-219ENST00000508659 RHBDF2Q6PJF5 856 aa17.73■□□□□ 0.43
CLDND1-219ENST00000508659 FMNL3Q8IVF7 1028 aa17.73■□□□□ 0.43
CLDND1-219ENST00000508659 MAML2Q8IZL2 1156 aaPredicted RBP17.73■□□□□ 0.43
CLDND1-219ENST00000508659 FAM149B1Q96BN6 582 aa17.73■□□□□ 0.43
CLDND1-219ENST00000508659 TRIM62Q9BVG3 475 aa17.73■□□□□ 0.43
CLDND1-219ENST00000508659 NAA15Q9BXJ9 866 aaKnown RBP17.73■□□□□ 0.43
CLDND1-219ENST00000508659 SLC4A5Q9BY07 1137 aa17.73■□□□□ 0.43
CLDND1-219ENST00000508659 DCLK3Q9C098 648 aa17.73■□□□□ 0.43
CLDND1-219ENST00000508659 GANQ9H2C0 597 aa17.73■□□□□ 0.43
CLDND1-219ENST00000508659 HSD3B7Q9H2F3 369 aa17.73■□□□□ 0.43
CLDND1-219ENST00000508659 PDCL3Q9H2J4 239 aa17.73■□□□□ 0.43
CLDND1-219ENST00000508659 ZNF510Q9Y2H8 683 aa17.73■□□□□ 0.43
CLDND1-219ENST00000508659 DAAM1Q9Y4D1 1078 aa17.73■□□□□ 0.43
CLDND1-219ENST00000508659 NEDD8-MDP1E9PL57 170 aa17.72■□□□□ 0.43
CLDND1-219ENST00000508659 HOXC11O43248 304 aaPredicted RBP17.72■□□□□ 0.43
CLDND1-219ENST00000508659 GABBR2O75899 941 aa17.72■□□□□ 0.43
CLDND1-219ENST00000508659 SP9P0CG40 484 aa17.72■□□□□ 0.43
CLDND1-219ENST00000508659 ATP1A3P13637 1013 aa17.72■□□□□ 0.43
CLDND1-219ENST00000508659 CLCN1P35523 988 aa17.72■□□□□ 0.43
CLDND1-219ENST00000508659 CXCL12P48061 93 aa17.72■□□□□ 0.43
CLDND1-219ENST00000508659 RPL34P49207 117 aaKnown RBP17.72■□□□□ 0.43
CLDND1-219ENST00000508659 POLR2FP61218 127 aaKnown RBP17.72■□□□□ 0.43
CLDND1-219ENST00000508659 UBXN1Q04323 297 aa17.72■□□□□ 0.43
CLDND1-219ENST00000508659 KDSRQ06136 332 aa17.72■□□□□ 0.43
CLDND1-219ENST00000508659 GAS6Q14393 721 aa17.72■□□□□ 0.43
CLDND1-219ENST00000508659 SYCP1Q15431 976 aa17.72■□□□□ 0.43
CLDND1-219ENST00000508659 ZNF528Q3MIS6 628 aa17.72■□□□□ 0.43
CLDND1-219ENST00000508659 Q6ZNB5 142 aa17.72■□□□□ 0.43
CLDND1-219ENST00000508659 C12orf40Q86WS4 652 aa17.72■□□□□ 0.43
CLDND1-219ENST00000508659 DHX40Q8IX18 779 aaKnown RBP17.72■□□□□ 0.43
CLDND1-219ENST00000508659 C1orf131Q8NDD1 294 aaKnown RBP17.72■□□□□ 0.43
CLDND1-219ENST00000508659 CCDC26Q8TAB7 109 aa17.72■□□□□ 0.43
CLDND1-219ENST00000508659 IPO4Q8TEX9 1081 aaKnown RBP17.72■□□□□ 0.43
CLDND1-219ENST00000508659 STK33Q9BYT3 514 aa17.72■□□□□ 0.43
CLDND1-219ENST00000508659 FBRSL1Q9HCM7 1045 aaKnown RBP17.72■□□□□ 0.43
CLDND1-219ENST00000508659 CYTH4Q9UIA0 394 aa17.72■□□□□ 0.43
CLDND1-219ENST00000508659 HBS1LQ9Y450 684 aaKnown RBP17.72■□□□□ 0.43
CLDND1-219ENST00000508659 MSI1O43347 362 aaKnown RBP17.71■□□□□ 0.43
CLDND1-219ENST00000508659 NCAM1P13591 858 aa17.71■□□□□ 0.43
CLDND1-219ENST00000508659 CYP11B1P15538 503 aa17.71■□□□□ 0.43
CLDND1-219ENST00000508659 NBL1P41271 181 aa17.71■□□□□ 0.43
CLDND1-219ENST00000508659 HARS2P49590 506 aaKnown RBP17.71■□□□□ 0.43
CLDND1-219ENST00000508659 SATB1Q01826 763 aa17.71■□□□□ 0.43
CLDND1-219ENST00000508659 MSANTD2Q6P1R3 559 aa17.71■□□□□ 0.43
CLDND1-219ENST00000508659 TSSK4Q6SA08 328 aa17.71■□□□□ 0.43
CLDND1-219ENST00000508659 MAMSTRQ6ZN01 415 aa17.71■□□□□ 0.43
CLDND1-219ENST00000508659 TPGS1Q6ZTW0 290 aa17.71■□□□□ 0.43
CLDND1-219ENST00000508659 SCUBE3Q8IX30 993 aa17.71■□□□□ 0.43
CLDND1-219ENST00000508659 NEK11Q8NG66 645 aa17.71■□□□□ 0.43
CLDND1-219ENST00000508659 SPAG5Q96R06 1193 aa17.71■□□□□ 0.43
CLDND1-219ENST00000508659 PNKPQ96T60 521 aa17.71■□□□□ 0.43
CLDND1-219ENST00000508659 PHOX2BQ99453 314 aa17.71■□□□□ 0.43
CLDND1-219ENST00000508659 FUCA2Q9BTY2 467 aa17.71■□□□□ 0.43
CLDND1-219ENST00000508659 BBS2Q9BXC9 721 aa17.71■□□□□ 0.43
CLDND1-219ENST00000508659 LHX5Q9H2C1 402 aa17.71■□□□□ 0.43
CLDND1-219ENST00000508659 SYNCQ9H7C4 482 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms