RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 NAA35Q5VZE5 725 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 OR6B2Q6IFH4 312 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 MSANTD2Q6P1R3 559 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 SLC26A9Q7LBE3 791 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 SCD5Q86SK9 330 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 MIB1Q86YT6 1006 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 CNGA4Q8IV77 575 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 VSTM4Q8IW00 320 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 SCUBE3Q8IX30 993 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 PLD4Q96BZ4 506 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 TRIM11Q96F44 468 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 SERPINB11Q96P15 392 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 SLC22A12Q96S37 553 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 CPXM1Q96SM3 734 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 NELL2Q99435 816 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 RPP25Q9BUL9 199 aaKnown RBP9.56□□□□□ -0.88
NUP54-207ENST00000508583 RNF38Q9H0F5 515 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 SMG9Q9H0W8 520 aaKnown RBP9.56□□□□□ -0.88
NUP54-207ENST00000508583 NMUR1Q9HB89 426 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 ARHGEF3Q9NR81 526 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 DUS2Q9NX74 493 aaKnown RBP9.56□□□□□ -0.88
NUP54-207ENST00000508583 SMPD4Q9NXE4 827 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 CFAP97Q9P2B7 532 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 RASAL2Q9UJF2 1139 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 STAP1Q9ULZ2 295 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 CCL26Q9Y258 94 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 HBS1LQ9Y450 684 aaKnown RBP9.56□□□□□ -0.88
NUP54-207ENST00000508583 PAXBP1Q9Y5B6 917 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 TRIOO75962 3097 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 ANKRD62A6NC57 917 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 TMEM221A6NGB7 291 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 GOLGA6L6A8MZA4 724 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 M0R296 226 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 PIK3R2O00459 728 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 NCAM2O15394 837 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 PAPSS1O43252 624 aaPredicted RBP9.55□□□□□ -0.88
NUP54-207ENST00000508583 NARSO43776 548 aaKnown RBP9.55□□□□□ -0.88
NUP54-207ENST00000508583 LATS1O95835 1130 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 ADH1CP00326 375 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 CYP1A1P04798 512 aaPredicted RBP9.55□□□□□ -0.88
NUP54-207ENST00000508583 GYPCP04921 128 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 SLC2A3P11169 496 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 MMP8P22894 467 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 GBP1P32455 592 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 GABRB2P47870 512 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 CDK17Q00537 523 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 SLC6A3Q01959 620 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 CENPCQ03188 943 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 EFEMP1Q12805 493 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 RUNX3Q13761 415 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 MLF2Q15773 248 aaPredicted RBP9.55□□□□□ -0.88
NUP54-207ENST00000508583 CLEC16AQ2KHT3 1053 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 PTPN20Q4JDL3 420 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 NUGGCQ68CJ6 796 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 ZNF852Q6ZMS4 543 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 HTR3DQ70Z44 454 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 ARCQ7LC44 396 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 IRF2BP2Q7Z5L9 587 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 RALGPS2Q86X27 583 aaPredicted RBP9.55□□□□□ -0.88
NUP54-207ENST00000508583 UNC45BQ8IWX7 931 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 SUGP1Q8IWZ8 645 aaKnown RBP9.55□□□□□ -0.88
NUP54-207ENST00000508583 DRC7Q8IY82 874 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 SIX5Q8N196 739 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 WDTC1Q8N5D0 677 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 OR8K1Q8NGG5 319 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 SLC20A1Q8WUM9 679 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 CPLX3Q8WVH0 158 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 CPA5Q8WXQ8 436 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 VCPIP1Q96JH7 1222 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 DDX50Q9BQ39 737 aaKnown RBP9.55□□□□□ -0.88
NUP54-207ENST00000508583 KLF16Q9BXK1 252 aaPredicted RBP9.55□□□□□ -0.88
NUP54-207ENST00000508583 PLA2G2FQ9BZM2 168 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 EPHX3Q9H6B9 360 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 GKN1Q9NS71 199 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 OSER1Q9NX31 292 aa9.55□□□□□ -0.88
NUP54-207ENST00000508583 KIF26AQ9ULI4 1882 aaPredicted RBP9.54□□□□□ -0.88
NUP54-207ENST00000508583 SLC12A8A0AV02 714 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 PRR33A8MZF0 331 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 ARNTLO00327 626 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 STK25O00506 426 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 GPR37L1O60883 481 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 DAB1O75553 588 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 APOEP02649 317 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 ERBB2P04626 1255 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 MYBL1P10243 752 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 IRF1P10914 325 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 GZMAP12544 262 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 UNGP13051 313 aaPredicted RBP9.54□□□□□ -0.88
NUP54-207ENST00000508583 CASP14P31944 242 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 NOS2P35228 1153 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 CHKAP35790 457 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 MAGEA9P43362 315 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 SLC11A2P49281 568 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 GSCP56915 257 aaPredicted RBP9.54□□□□□ -0.88
NUP54-207ENST00000508583 RING1Q06587 406 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 SLC44A4Q53GD3 710 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 DCAF6Q58WW2 860 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 TMEM31Q5JXX7 168 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 ACBD5Q5T8D3 534 aaPredicted RBP9.54□□□□□ -0.88
NUP54-207ENST00000508583 FAM102AQ5T9C2 384 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms