RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 SETD7Q8WTS6 366 aaKnown RBP9.95□□□□□ -0.82
NEDD9-211ENST00000508546 SCFD1Q8WVM8 642 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 WBP2Q969T9 261 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 KIF2CQ99661 725 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 B3GNT5Q9BYG0 378 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 PCIF1Q9H4Z3 704 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 GAREM1Q9H706 876 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 CCSER2Q9H7U1 834 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 TM7SF3Q9NS93 570 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 COMMD8Q9NX08 183 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 USP36Q9P275 1121 aaKnown RBP9.95□□□□□ -0.82
NEDD9-211ENST00000508546 WDR35Q9P2L0 1181 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 CHORDC1Q9UHD1 332 aaPredicted RBP9.95□□□□□ -0.82
NEDD9-211ENST00000508546 DNMT3LQ9UJW3 386 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 RAD54BQ9Y620 910 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 ATP8B3O60423 1300 aa9.94□□□□□ -0.82
NEDD9-211ENST00000508546 MEI4A8MW99 385 aa9.94□□□□□ -0.82
NEDD9-211ENST00000508546 E9PAM4 449 aa9.94□□□□□ -0.82
NEDD9-211ENST00000508546 CLDN5O00501 218 aa9.94□□□□□ -0.82
NEDD9-211ENST00000508546 NPC1O15118 1278 aa9.94□□□□□ -0.82
NEDD9-211ENST00000508546 BCAT2O15382 392 aaPredicted RBP9.94□□□□□ -0.82
NEDD9-211ENST00000508546 GREM1O60565 184 aa9.94□□□□□ -0.82
NEDD9-211ENST00000508546 PRPF6O94906 941 aaKnown RBP9.94□□□□□ -0.82
NEDD9-211ENST00000508546 STAU1O95793 577 aaKnown RBP9.94□□□□□ -0.82
NEDD9-211ENST00000508546 CST3P01034 146 aaPredicted RBP9.94□□□□□ -0.82
NEDD9-211ENST00000508546 ATXN1LP0C7T5 689 aaKnown RBP9.94□□□□□ -0.82
NEDD9-211ENST00000508546 NCAM1P13591 858 aa9.94□□□□□ -0.82
NEDD9-211ENST00000508546 TYRP14679 529 aa9.94□□□□□ -0.82
NEDD9-211ENST00000508546 KIAA1324Q6UXG2 1013 aaKnown RBP9.94□□□□□ -0.82
NEDD9-211ENST00000508546 USP49Q70CQ1 688 aa9.94□□□□□ -0.82
NEDD9-211ENST00000508546 SV2BQ7L1I2 683 aa9.94□□□□□ -0.82
NEDD9-211ENST00000508546 CBWD2Q8IUF1 395 aa9.94□□□□□ -0.82
NEDD9-211ENST00000508546 ZCCHC9Q8N567 271 aaKnown RBP9.94□□□□□ -0.82
NEDD9-211ENST00000508546 SPRYD3Q8NCJ5 442 aa9.94□□□□□ -0.82
NEDD9-211ENST00000508546 SCAMP5Q8TAC9 235 aa9.94□□□□□ -0.82
NEDD9-211ENST00000508546 NOC3LQ8WTT2 800 aaKnown RBP9.94□□□□□ -0.82
NEDD9-211ENST00000508546 TOE1Q96GM8 510 aaKnown RBP9.94□□□□□ -0.82
NEDD9-211ENST00000508546 EPSTI1Q96J88 318 aa9.94□□□□□ -0.82
NEDD9-211ENST00000508546 BBS2Q9BXC9 721 aa9.94□□□□□ -0.82
NEDD9-211ENST00000508546 FGFBP2Q9BYJ0 223 aa9.94□□□□□ -0.82
NEDD9-211ENST00000508546 SLC6A17Q9H1V8 727 aa9.94□□□□□ -0.82
NEDD9-211ENST00000508546 DPEP3Q9H4B8 488 aa9.94□□□□□ -0.82
NEDD9-211ENST00000508546 IL21RQ9HBE5 538 aa9.94□□□□□ -0.82
NEDD9-211ENST00000508546 KIAA1586Q9HCI6 787 aa9.94□□□□□ -0.82
NEDD9-211ENST00000508546 ITM2CQ9NQX7 267 aa9.94□□□□□ -0.82
NEDD9-211ENST00000508546 CCDC39Q9UFE4 941 aa9.94□□□□□ -0.82
NEDD9-211ENST00000508546 FNDC3AQ9Y2H6 1198 aaKnown RBP9.94□□□□□ -0.82
NEDD9-211ENST00000508546 UBR5O95071 2799 aaPredicted RBP9.93□□□□□ -0.82
NEDD9-211ENST00000508546 FAM149AA5PLN7 773 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 METTL12A8MUP2 240 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 A8MXQ7 604 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 WASH3PC4AMC7 463 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 NEDD8-MDP1E9PL57 170 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 TLR5O60602 858 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 WISP1O95388 367 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 IGLV3-19P01714 112 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 CISD3P0C7P0 127 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 IRF1P10914 325 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 OXTRP30559 389 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 DGKGP49619 791 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 SLC5A3P53794 718 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 TNNC1P63316 161 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 BNC1Q01954 994 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 ENPP2Q13822 863 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 STARD3Q14849 445 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 SF3A1Q15459 793 aaKnown RBP9.93□□□□□ -0.82
NEDD9-211ENST00000508546 HLA-BQ31612 363 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 WDR72Q3MJ13 1102 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 FUT11Q495W5 492 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 DCAF12L1Q5VU92 463 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 RRAGBQ5VZM2 374 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 BRAPQ7Z569 592 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 FAM35AQ86V20 835 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 PDCD7Q8N8D1 485 aaKnown RBP9.93□□□□□ -0.82
NEDD9-211ENST00000508546 C1orf216Q8TAB5 229 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 RHBDD1Q8TEB9 315 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 SMARCD1Q96GM5 515 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 KCNK16Q96T55 309 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 GPR174Q9BXC1 333 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 KLF16Q9BXK1 252 aaPredicted RBP9.93□□□□□ -0.82
NEDD9-211ENST00000508546 SEMA4CQ9C0C4 833 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 MKRN2Q9H000 416 aaKnown RBP9.93□□□□□ -0.82
NEDD9-211ENST00000508546 NACA2Q9H009 215 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 PCED1AQ9H1Q7 454 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 PRDM16Q9HAZ2 1276 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 DMAP1Q9NPF5 467 aaPredicted RBP9.93□□□□□ -0.82
NEDD9-211ENST00000508546 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.93□□□□□ -0.82
NEDD9-211ENST00000508546 GMIPQ9P107 970 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 LSM7Q9UK45 103 aaKnown RBP9.93□□□□□ -0.82
NEDD9-211ENST00000508546 FBXO10Q9UK96 956 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 STON1Q9Y6Q2 735 aa9.93□□□□□ -0.82
NEDD9-211ENST00000508546 TEX51A0A1B0GUA7 166 aa9.92□□□□□ -0.82
NEDD9-211ENST00000508546 KCNJ18B7U540 433 aa9.92□□□□□ -0.82
NEDD9-211ENST00000508546 NTRK1P04629 796 aa9.92□□□□□ -0.82
NEDD9-211ENST00000508546 IDEP14735 1019 aa9.92□□□□□ -0.82
NEDD9-211ENST00000508546 GJB2P29033 226 aa9.92□□□□□ -0.82
NEDD9-211ENST00000508546 TPMTP51580 245 aa9.92□□□□□ -0.82
NEDD9-211ENST00000508546 GOLGA8FQ08AF8 430 aa9.92□□□□□ -0.82
NEDD9-211ENST00000508546 GOLGA8DPQ0D2H9 430 aa9.92□□□□□ -0.82
NEDD9-211ENST00000508546 SUZ12Q15022 739 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms