RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 TMEM225BP0DP42 221 aa6.25□□□□□ -1.41
TOPBP1-206ENST00000508524 ATICP31939 592 aa6.25□□□□□ -1.41
TOPBP1-206ENST00000508524 MMP13P45452 471 aa6.25□□□□□ -1.41
TOPBP1-206ENST00000508524 EPHA10Q5JZY3 1008 aa6.25□□□□□ -1.41
TOPBP1-206ENST00000508524 TMTC4Q5T4D3 741 aa6.25□□□□□ -1.41
TOPBP1-206ENST00000508524 VSTM1Q6UX27 236 aa6.25□□□□□ -1.41
TOPBP1-206ENST00000508524 LIX1LQ8IVB5 337 aa6.25□□□□□ -1.41
TOPBP1-206ENST00000508524 FSTL5Q8N475 847 aaPredicted RBP6.25□□□□□ -1.41
TOPBP1-206ENST00000508524 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.25□□□□□ -1.41
TOPBP1-206ENST00000508524 SUN3Q8TAQ9 357 aa6.25□□□□□ -1.41
TOPBP1-206ENST00000508524 VPS50Q96JG6 964 aa6.25□□□□□ -1.41
TOPBP1-206ENST00000508524 FZD4Q9ULV1 537 aa6.25□□□□□ -1.41
TOPBP1-206ENST00000508524 ZNF521Q96K83 1311 aa6.25□□□□□ -1.41
TOPBP1-206ENST00000508524 FYB1O15117 783 aa6.24□□□□□ -1.41
TOPBP1-206ENST00000508524 RNF8O76064 485 aa6.24□□□□□ -1.41
TOPBP1-206ENST00000508524 WDR47O94967 919 aa6.24□□□□□ -1.41
TOPBP1-206ENST00000508524 MBPP02686 304 aaPredicted RBP6.24□□□□□ -1.41
TOPBP1-206ENST00000508524 ARP10275 920 aa6.24□□□□□ -1.41
TOPBP1-206ENST00000508524 FGFR2P21802 821 aa6.24□□□□□ -1.41
TOPBP1-206ENST00000508524 TXNL4AP83876 142 aaKnown RBP6.24□□□□□ -1.41
TOPBP1-206ENST00000508524 SLC14A1Q13336 389 aa6.24□□□□□ -1.41
TOPBP1-206ENST00000508524 ACOX1Q15067 660 aa6.24□□□□□ -1.41
TOPBP1-206ENST00000508524 PRR11Q96HE9 360 aaPredicted RBP6.24□□□□□ -1.41
TOPBP1-206ENST00000508524 HIC2Q96JB3 615 aa6.24□□□□□ -1.41
TOPBP1-206ENST00000508524 SARGQ9BW04 601 aa6.24□□□□□ -1.41
TOPBP1-206ENST00000508524 USP29Q9HBJ7 922 aa6.24□□□□□ -1.41
TOPBP1-206ENST00000508524 VPS45Q9NRW7 570 aa6.24□□□□□ -1.41
TOPBP1-206ENST00000508524 ELOVL5Q9NYP7 299 aa6.24□□□□□ -1.41
TOPBP1-206ENST00000508524 CHPF2Q9P2E5 772 aa6.24□□□□□ -1.41
TOPBP1-206ENST00000508524 FAM50BQ9Y247 325 aa6.24□□□□□ -1.41
TOPBP1-206ENST00000508524 A0A1W2PPC4 97 aa6.23□□□□□ -1.41
TOPBP1-206ENST00000508524 AREL1O15033 823 aa6.23□□□□□ -1.41
TOPBP1-206ENST00000508524 KCNQ3O43525 872 aa6.23□□□□□ -1.41
TOPBP1-206ENST00000508524 CBFA2T3O75081 653 aa6.23□□□□□ -1.41
TOPBP1-206ENST00000508524 YY1P25490 414 aa6.23□□□□□ -1.41
TOPBP1-206ENST00000508524 THBS4P35443 961 aa6.23□□□□□ -1.41
TOPBP1-206ENST00000508524 PRIM2P49643 509 aa6.23□□□□□ -1.41
TOPBP1-206ENST00000508524 DNASE1L3Q13609 305 aa6.23□□□□□ -1.41
TOPBP1-206ENST00000508524 AASDHQ4L235 1098 aaPredicted RBP6.23□□□□□ -1.41
TOPBP1-206ENST00000508524 ABLIM2Q6H8Q1 611 aa6.23□□□□□ -1.41
TOPBP1-206ENST00000508524 CRTC1Q6UUV9 634 aa6.23□□□□□ -1.41
TOPBP1-206ENST00000508524 PRSS3P2Q8NHM4 247 aa6.23□□□□□ -1.41
TOPBP1-206ENST00000508524 COQ8BQ96D53 544 aa6.23□□□□□ -1.41
TOPBP1-206ENST00000508524 LRRC46Q96FV0 321 aa6.23□□□□□ -1.41
TOPBP1-206ENST00000508524 C8orf48Q96LL4 319 aa6.23□□□□□ -1.41
TOPBP1-206ENST00000508524 FCRL4Q96PJ5 515 aa6.23□□□□□ -1.41
TOPBP1-206ENST00000508524 WDR24Q96S15 920 aa6.23□□□□□ -1.41
TOPBP1-206ENST00000508524 GJB4Q9NTQ9 266 aa6.23□□□□□ -1.41
TOPBP1-206ENST00000508524 TRNAU1APQ9NX07 287 aaKnown RBP6.23□□□□□ -1.41
TOPBP1-206ENST00000508524 SEMA5BQ9P283 1151 aa6.23□□□□□ -1.41
TOPBP1-206ENST00000508524 MYO1AQ9UBC5 1043 aa6.23□□□□□ -1.41
TOPBP1-206ENST00000508524 NESP48681 1621 aa6.23□□□□□ -1.41
TOPBP1-206ENST00000508524 CACNA1IQ9P0X4 2223 aa6.23□□□□□ -1.41
TOPBP1-206ENST00000508524 ADAM10O14672 748 aa6.22□□□□□ -1.41
TOPBP1-206ENST00000508524 HOXD9P28356 352 aaPredicted RBP6.22□□□□□ -1.41
TOPBP1-206ENST00000508524 GHRHRQ02643 423 aa6.22□□□□□ -1.41
TOPBP1-206ENST00000508524 CFHR1Q03591 330 aa6.22□□□□□ -1.41
TOPBP1-206ENST00000508524 RABEP1Q15276 862 aa6.22□□□□□ -1.41
TOPBP1-206ENST00000508524 PIGOQ8TEQ8 1089 aa6.22□□□□□ -1.41
TOPBP1-206ENST00000508524 IGFBPL1Q8WX77 278 aa6.22□□□□□ -1.41
TOPBP1-206ENST00000508524 TMEM79Q9BSE2 394 aa6.22□□□□□ -1.41
TOPBP1-206ENST00000508524 COLEC11Q9BWP8 271 aa6.22□□□□□ -1.41
TOPBP1-206ENST00000508524 SAP30LQ9HAJ7 183 aa6.22□□□□□ -1.41
TOPBP1-206ENST00000508524 ZBTB26Q9HCK0 441 aa6.22□□□□□ -1.41
TOPBP1-206ENST00000508524 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.21□□□□□ -1.42
TOPBP1-206ENST00000508524 APAF1O14727 1248 aa6.21□□□□□ -1.42
TOPBP1-206ENST00000508524 MST1P26927 711 aa6.21□□□□□ -1.42
TOPBP1-206ENST00000508524 GALNSP34059 522 aa6.21□□□□□ -1.42
TOPBP1-206ENST00000508524 PBX1P40424 430 aa6.21□□□□□ -1.42
TOPBP1-206ENST00000508524 CCDC15Q0P6D6 951 aa6.21□□□□□ -1.42
TOPBP1-206ENST00000508524 GPS1Q13098 491 aa6.21□□□□□ -1.42
TOPBP1-206ENST00000508524 COBLL1Q53SF7 1204 aa6.21□□□□□ -1.42
TOPBP1-206ENST00000508524 CC2D1BQ5T0F9 858 aaKnown RBP6.21□□□□□ -1.42
TOPBP1-206ENST00000508524 P3H2Q8IVL5 708 aa6.21□□□□□ -1.42
TOPBP1-206ENST00000508524 CCDC33Q8N5R6 958 aa6.21□□□□□ -1.42
TOPBP1-206ENST00000508524 FAM71DQ8N9W8 422 aa6.21□□□□□ -1.42
TOPBP1-206ENST00000508524 SIGLEC11Q96RL6 698 aa6.21□□□□□ -1.42
TOPBP1-206ENST00000508524 CINPQ9BW66 212 aaPredicted RBP6.21□□□□□ -1.42
TOPBP1-206ENST00000508524 AFG3L2Q9Y4W6 797 aa6.21□□□□□ -1.42
TOPBP1-206ENST00000508524 THOC2Q8NI27 1593 aaKnown RBP6.21□□□□□ -1.42
TOPBP1-206ENST00000508524 PMM2O15305 246 aa6.2□□□□□ -1.42
TOPBP1-206ENST00000508524 TMIGD3P0DMS9 266 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-206ENST00000508524 MYL4P12829 197 aa6.2□□□□□ -1.42
TOPBP1-206ENST00000508524 TRIM27P14373 513 aa6.2□□□□□ -1.42
TOPBP1-206ENST00000508524 NR4A2P43354 598 aa6.2□□□□□ -1.42
TOPBP1-206ENST00000508524 STT3AP46977 705 aa6.2□□□□□ -1.42
TOPBP1-206ENST00000508524 YPEL5P62699 121 aa6.2□□□□□ -1.42
TOPBP1-206ENST00000508524 RAE1P78406 368 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-206ENST00000508524 KCNJ12Q14500 433 aa6.2□□□□□ -1.42
TOPBP1-206ENST00000508524 SAFBQ15424 915 aaKnown RBP eCLIP6.2□□□□□ -1.42
TOPBP1-206ENST00000508524 C10orf25Q5T742 122 aa6.2□□□□□ -1.42
TOPBP1-206ENST00000508524 FAXCQ5TGI0 409 aa6.2□□□□□ -1.42
TOPBP1-206ENST00000508524 PXDC1Q5TGL8 231 aa6.2□□□□□ -1.42
TOPBP1-206ENST00000508524 KIAA0408Q6ZU52 694 aa6.2□□□□□ -1.42
TOPBP1-206ENST00000508524 KRT73Q86Y46 540 aa6.2□□□□□ -1.42
TOPBP1-206ENST00000508524 ZNF366Q8N895 744 aa6.2□□□□□ -1.42
TOPBP1-206ENST00000508524 TBCBQ99426 244 aa6.2□□□□□ -1.42
TOPBP1-206ENST00000508524 MAGEB5Q9BZ81 275 aa6.2□□□□□ -1.42
TOPBP1-206ENST00000508524 MTMR4Q9NYA4 1195 aa6.2□□□□□ -1.42
TOPBP1-206ENST00000508524 MAFFQ9ULX9 164 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms