RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 CC2D1BQ5T0F9 858 aaKnown RBP5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 LCE1AQ5T7P2 110 aa5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 MZT2AQ6P582 158 aa5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 SDR16C5Q8N3Y7 309 aa5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 NRACQ8N912 160 aa5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 C9orf106Q8NAJ2 232 aa5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 IQCDQ96DY2 449 aa5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 LRRC46Q96FV0 321 aa5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 VPS50Q96JG6 964 aa5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 FAM227BQ96M60 508 aa5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 SAP30LQ9HAJ7 183 aa5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 HEYLQ9NQ87 328 aaPredicted RBP5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 TMEM184CQ9NVA4 438 aa5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 FZD4Q9ULV1 537 aa5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 COL15A1P39059 1388 aa5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 POM121BA6NF01 834 aa5.48□□□□□ -1.53
UBE2D3-225ENST00000508476 WDR47O94967 919 aa5.48□□□□□ -1.53
UBE2D3-225ENST00000508476 BMP15O95972 392 aa5.48□□□□□ -1.53
UBE2D3-225ENST00000508476 ARP10275 920 aa5.48□□□□□ -1.53
UBE2D3-225ENST00000508476 SLC5A1P13866 664 aa5.48□□□□□ -1.53
UBE2D3-225ENST00000508476 GALNSP34059 522 aa5.48□□□□□ -1.53
UBE2D3-225ENST00000508476 PBX1P40424 430 aa5.48□□□□□ -1.53
UBE2D3-225ENST00000508476 TXNL4AP83876 142 aaKnown RBP5.48□□□□□ -1.53
UBE2D3-225ENST00000508476 ZNF91Q05481 1191 aa5.48□□□□□ -1.53
UBE2D3-225ENST00000508476 KPNB1Q14974 876 aaKnown RBP5.48□□□□□ -1.53
UBE2D3-225ENST00000508476 CLCA4Q14CN2 919 aa5.48□□□□□ -1.53
UBE2D3-225ENST00000508476 PXDC1Q5TGL8 231 aa5.48□□□□□ -1.53
UBE2D3-225ENST00000508476 CRTC1Q6UUV9 634 aa5.48□□□□□ -1.53
UBE2D3-225ENST00000508476 VSTM1Q6UX27 236 aa5.48□□□□□ -1.53
UBE2D3-225ENST00000508476 P3H2Q8IVL5 708 aa5.48□□□□□ -1.53
UBE2D3-225ENST00000508476 MBD3L2Q8NHZ7 208 aaPredicted RBP5.48□□□□□ -1.53
UBE2D3-225ENST00000508476 SUN3Q8TAQ9 357 aa5.48□□□□□ -1.53
UBE2D3-225ENST00000508476 COQ8BQ96D53 544 aa5.48□□□□□ -1.53
UBE2D3-225ENST00000508476 SIGLEC11Q96RL6 698 aa5.48□□□□□ -1.53
UBE2D3-225ENST00000508476 C16orf96A6NNT2 1141 aa5.47□□□□□ -1.53
UBE2D3-225ENST00000508476 PPM1GO15355 546 aaPredicted RBP5.47□□□□□ -1.53
UBE2D3-225ENST00000508476 PARNO95453 639 aaKnown RBP5.47□□□□□ -1.53
UBE2D3-225ENST00000508476 TSHRP16473 764 aa5.47□□□□□ -1.53
UBE2D3-225ENST00000508476 THBS4P35443 961 aa5.47□□□□□ -1.53
UBE2D3-225ENST00000508476 CFHR1Q03591 330 aa5.47□□□□□ -1.53
UBE2D3-225ENST00000508476 AASDHQ4L235 1098 aaPredicted RBP5.47□□□□□ -1.53
UBE2D3-225ENST00000508476 KRT28Q7Z3Y7 464 aa5.47□□□□□ -1.53
UBE2D3-225ENST00000508476 RNF152Q8N8N0 203 aa5.47□□□□□ -1.53
UBE2D3-225ENST00000508476 FAM71DQ8N9W8 422 aa5.47□□□□□ -1.53
UBE2D3-225ENST00000508476 ATP11CQ8NB49 1132 aa5.47□□□□□ -1.53
UBE2D3-225ENST00000508476 NGDNQ8NEJ9 315 aaKnown RBP5.47□□□□□ -1.53
UBE2D3-225ENST00000508476 PCDHB2Q9Y5E7 798 aa5.47□□□□□ -1.53
UBE2D3-225ENST00000508476 RRHO14718 337 aa5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 THAP12O43422 761 aa5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 CBFA2T3O75081 653 aa5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 TMIGD3P0DMS9 266 aaPredicted RBP5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 PRF1P14222 555 aa5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 FGFR2P21802 821 aa5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 PRIM2P49643 509 aa5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 CASP5P51878 434 aa5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 RAE1P78406 368 aaKnown RBP5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 CCDC15Q0P6D6 951 aa5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 DNASE1L3Q13609 305 aa5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 ACOX1Q15067 660 aa5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 RBMS2Q15434 407 aaKnown RBP5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 TRIM71Q2Q1W2 868 aaKnown RBP5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 C10orf25Q5T742 122 aa5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 AWAT2Q6E213 333 aa5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 ABLIM2Q6H8Q1 611 aa5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 TECPR1Q7Z6L1 1165 aa5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 CCDC33Q8N5R6 958 aa5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 C16orf52Q8NHV5 167 aa5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 CUL5Q93034 780 aa5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 TTC17Q96AE7 1141 aa5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 HIC2Q96JB3 615 aa5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 MLXIPLQ9NP71 852 aa5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 VPS4AQ9UN37 437 aa5.46□□□□□ -1.54
UBE2D3-225ENST00000508476 FGBP02675 491 aa5.45□□□□□ -1.54
UBE2D3-225ENST00000508476 ZNF260Q3ZCT1 412 aa5.45□□□□□ -1.54
UBE2D3-225ENST00000508476 TFAP2DQ7Z6R9 452 aa5.45□□□□□ -1.54
UBE2D3-225ENST00000508476 KRT73Q86Y46 540 aa5.45□□□□□ -1.54
UBE2D3-225ENST00000508476 C16orf71Q8IYS4 520 aaPredicted RBP5.45□□□□□ -1.54
UBE2D3-225ENST00000508476 TBCBQ99426 244 aa5.45□□□□□ -1.54
UBE2D3-225ENST00000508476 TMEM79Q9BSE2 394 aa5.45□□□□□ -1.54
UBE2D3-225ENST00000508476 TM2D2Q9BX73 214 aa5.45□□□□□ -1.54
UBE2D3-225ENST00000508476 ADGRE3Q9BY15 652 aa5.45□□□□□ -1.54
UBE2D3-225ENST00000508476 METTL14Q9HCE5 456 aaKnown RBP5.45□□□□□ -1.54
UBE2D3-225ENST00000508476 SEMA5BQ9P283 1151 aa5.45□□□□□ -1.54
UBE2D3-225ENST00000508476 FOXN3O00409 490 aaPredicted RBP5.44□□□□□ -1.54
UBE2D3-225ENST00000508476 SOCS2O14508 198 aa5.44□□□□□ -1.54
UBE2D3-225ENST00000508476 APAF1O14727 1248 aa5.44□□□□□ -1.54
UBE2D3-225ENST00000508476 WDR5P61964 334 aaKnown RBP5.44□□□□□ -1.54
UBE2D3-225ENST00000508476 GPS1Q13098 491 aa5.44□□□□□ -1.54
UBE2D3-225ENST00000508476 COBLL1Q53SF7 1204 aa5.44□□□□□ -1.54
UBE2D3-225ENST00000508476 TMEM63BQ5T3F8 832 aa5.44□□□□□ -1.54
UBE2D3-225ENST00000508476 RAP1GAP2Q684P5 730 aa5.44□□□□□ -1.54
UBE2D3-225ENST00000508476 IRF2BP2Q7Z5L9 587 aa5.44□□□□□ -1.54
UBE2D3-225ENST00000508476 PIP4P1Q86T03 277 aa5.44□□□□□ -1.54
UBE2D3-225ENST00000508476 PIGOQ8TEQ8 1089 aa5.44□□□□□ -1.54
UBE2D3-225ENST00000508476 HMCESQ96FZ2 354 aa5.44□□□□□ -1.54
UBE2D3-225ENST00000508476 WDR24Q96S15 920 aa5.44□□□□□ -1.54
UBE2D3-225ENST00000508476 CINPQ9BW66 212 aaPredicted RBP5.44□□□□□ -1.54
UBE2D3-225ENST00000508476 LY6G6EA0A0G2JKS1 128 aa5.43□□□□□ -1.54
UBE2D3-225ENST00000508476 CLCA1A8K7I4 914 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms