RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.04■□□□□ -0
HMGCLL1-208ENST00000508459 MAGED2Q9UNF1 606 aaPredicted RBP15.04■□□□□ -0
HMGCLL1-208ENST00000508459 TLR6Q9Y2C9 796 aa15.04■□□□□ -0
HMGCLL1-208ENST00000508459 PCDHA3Q9Y5H8 950 aa15.04■□□□□ -0
HMGCLL1-208ENST00000508459 HCFC2Q9Y5Z7 792 aa15.04■□□□□ -0
HMGCLL1-208ENST00000508459 CAPN6Q9Y6Q1 641 aa15.04■□□□□ -0
HMGCLL1-208ENST00000508459 APOEP02649 317 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 COMTP21964 271 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 PAFAH1B1P43034 410 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 NRIP1P48552 1158 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 SULT1E1P49888 294 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 EPHA5P54756 1037 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 DEUP1Q05D60 604 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 CKAP4Q07065 602 aaKnown RBP15.03■□□□□ -0
HMGCLL1-208ENST00000508459 IFRD2Q12894 506 aaPredicted RBP15.03■□□□□ -0
HMGCLL1-208ENST00000508459 CCDC142Q17RM4 750 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 C2CD6Q53TS8 623 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 EFHC2Q5JST6 749 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 ZFYVE27Q5T4F4 411 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 SEL1L2Q5TEA6 688 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 CES5AQ6NT32 575 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 CC2D1AQ6P1N0 951 aaPredicted RBP15.03■□□□□ -0
HMGCLL1-208ENST00000508459 SYT10Q6XYQ8 523 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 GPRIN1Q7Z2K8 1008 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 KATNAL2Q8IYT4 538 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 RCOR2Q8IZ40 523 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 MNS1Q8NEH6 495 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 EXD1Q8NHP7 514 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 GIPC2Q8TF65 315 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 FAM172AQ8WUF8 416 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 RNF34Q969K3 372 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 HES6Q96HZ4 224 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 RPGRIP1Q96KN7 1286 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 DCLK3Q9C098 648 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 HOMER3Q9NSC5 361 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.03■□□□□ -0
HMGCLL1-208ENST00000508459 DDIT4Q9NX09 232 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 RCOR3Q9P2K3 495 aaPredicted RBP15.03■□□□□ -0
HMGCLL1-208ENST00000508459 TRIM10Q9UDY6 481 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 USP18Q9UMW8 372 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 EFR3BQ9Y2G0 817 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 ZNF510Q9Y2H8 683 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 GREB1Q4ZG55 1949 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 MYO16Q9Y6X6 1858 aa15.03■□□□□ -0
HMGCLL1-208ENST00000508459 ZNF638Q14966 1978 aaKnown RBP15.02■□□□□ -0
HMGCLL1-208ENST00000508459 ZNF840PA6NDX5 716 aa15.02■□□□□ -0
HMGCLL1-208ENST00000508459 TMEM110-MUSTN1A8MSY1 372 aa15.02■□□□□ -0
HMGCLL1-208ENST00000508459 M0QYT0 321 aa15.02■□□□□ -0
HMGCLL1-208ENST00000508459 PIK3R2O00459 728 aa15.02■□□□□ -0
HMGCLL1-208ENST00000508459 TLR5O60602 858 aa15.02■□□□□ -0
HMGCLL1-208ENST00000508459 ARHGEF15O94989 841 aa15.02■□□□□ -0
HMGCLL1-208ENST00000508459 ZRANB2O95218 330 aaKnown RBP eCLIP15.02■□□□□ -0
HMGCLL1-208ENST00000508459 LATS1O95835 1130 aa15.02■□□□□ -0
HMGCLL1-208ENST00000508459 TRUB2O95900 331 aaKnown RBP15.02■□□□□ -0
HMGCLL1-208ENST00000508459 RARGP13631 454 aa15.02■□□□□ -0
HMGCLL1-208ENST00000508459 HMGA1P17096 107 aaKnown RBP15.02■□□□□ -0
HMGCLL1-208ENST00000508459 FLT3P36888 993 aa15.02■□□□□ -0
HMGCLL1-208ENST00000508459 CCDC14Q49A88 953 aa15.02■□□□□ -0
HMGCLL1-208ENST00000508459 C10orf120Q5SQS8 335 aa15.02■□□□□ -0
HMGCLL1-208ENST00000508459 CCDC181Q5TID7 509 aa15.02■□□□□ -0
HMGCLL1-208ENST00000508459 PAPD7Q5XG87 772 aaKnown RBP15.02■□□□□ -0
HMGCLL1-208ENST00000508459 TTC9BQ8N6N2 239 aa15.02■□□□□ -0
HMGCLL1-208ENST00000508459 PLD4Q96BZ4 506 aa15.02■□□□□ -0
HMGCLL1-208ENST00000508459 CRISPLD1Q9H336 500 aa15.02■□□□□ -0
HMGCLL1-208ENST00000508459 WDCPQ9H6R7 721 aa15.02■□□□□ -0
HMGCLL1-208ENST00000508459 CERS4Q9HA82 394 aa15.02■□□□□ -0
HMGCLL1-208ENST00000508459 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.02■□□□□ -0
HMGCLL1-208ENST00000508459 GMIPQ9P107 970 aa15.02■□□□□ -0
HMGCLL1-208ENST00000508459 SALL4Q9UJQ4 1053 aa15.02■□□□□ -0
HMGCLL1-208ENST00000508459 SNX12Q9UMY4 172 aa15.02■□□□□ -0
HMGCLL1-208ENST00000508459 ZFP37Q9Y6Q3 630 aaPredicted RBP15.02■□□□□ -0
HMGCLL1-208ENST00000508459 TRAV19A0A0A6YYK7 116 aa15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 GOLGA6L10A0A0M3HER8 536 aa15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 A0A1W2PQH9 124 aa15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 LRCH4O75427 683 aa15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 GRAP2O75791 330 aa15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 IRS1P35568 1242 aa15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 HARS2P49590 506 aaKnown RBP15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 SCAPQ12770 1279 aa15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 TRIP4Q15650 581 aaPredicted RBP15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 ERMARDQ5T6L9 678 aa15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 EMC1Q8N766 993 aa15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 ATP6V0D2Q8N8Y2 350 aa15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 VN1R2Q8NFZ6 395 aa15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 JOSD2Q8TAC2 188 aa15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 ZNF592Q92610 1267 aa15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 AZIN2Q96A70 460 aa15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 RIPOR3Q96MK2 946 aa15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 CFAP57Q96MR6 1250 aa15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 DCBLD2Q96PD2 775 aa15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 HAPLN3Q96S86 360 aa15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 ZWILCHQ9H900 591 aa15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 MARCH2Q9P0N8 246 aa15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 TJP2Q9UDY2 1190 aa15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 LSM7Q9UK45 103 aaKnown RBP15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 COLQQ9Y215 455 aaPredicted RBP15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 USTQ9Y2C2 406 aa15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 TNRC18O15417 2968 aaPredicted RBP15.01□□□□□ -0.01
HMGCLL1-208ENST00000508459 CCDC195A0A1B0GUA6 201 aa15□□□□□ -0.01
HMGCLL1-208ENST00000508459 FTCDO95954 541 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms