RNA–Protein interactions for RNA: ENST00000508387.5

NR1I3-225, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-225ENST00000508387 MED15Q96RN5 788 aa13.47□□□□□ -0.25
NR1I3-225ENST00000508387 ACOX2Q99424 681 aa13.47□□□□□ -0.25
NR1I3-225ENST00000508387 DUSP15Q9H1R2 295 aaPredicted RBP13.47□□□□□ -0.25
NR1I3-225ENST00000508387 DNAJC17Q9NVM6 304 aaKnown RBP13.47□□□□□ -0.25
NR1I3-225ENST00000508387 DNMT3LQ9UJW3 386 aa13.47□□□□□ -0.25
NR1I3-225ENST00000508387 SPTBN4Q9H254 2564 aa13.46□□□□□ -0.25
NR1I3-225ENST00000508387 CCDC163A0A0D9SF12 145 aa13.46□□□□□ -0.25
NR1I3-225ENST00000508387 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.46□□□□□ -0.25
NR1I3-225ENST00000508387 PRRT4C9JH25 899 aa13.46□□□□□ -0.25
NR1I3-225ENST00000508387 XPO1O14980 1071 aaKnown RBP13.46□□□□□ -0.25
NR1I3-225ENST00000508387 EPN2O95208 641 aa13.46□□□□□ -0.25
NR1I3-225ENST00000508387 GRIA2P42262 883 aa13.46□□□□□ -0.25
NR1I3-225ENST00000508387 RGS7P49802 495 aa13.46□□□□□ -0.25
NR1I3-225ENST00000508387 ATXN1P54253 815 aaKnown RBP13.46□□□□□ -0.25
NR1I3-225ENST00000508387 BCAT1P54687 386 aa13.46□□□□□ -0.25
NR1I3-225ENST00000508387 YWHAGP61981 247 aaKnown RBP eCLIP13.46□□□□□ -0.25
NR1I3-225ENST00000508387 APBA1Q02410 837 aa13.46□□□□□ -0.25
NR1I3-225ENST00000508387 PKDCCQ504Y2 493 aa13.46□□□□□ -0.25
NR1I3-225ENST00000508387 C10orf76Q5T2E6 689 aa13.46□□□□□ -0.25
NR1I3-225ENST00000508387 EGFLAMQ63HQ2 1017 aa13.46□□□□□ -0.25
NR1I3-225ENST00000508387 KLHDC10Q6PID8 442 aa13.46□□□□□ -0.25
NR1I3-225ENST00000508387 CACNA2D4Q7Z3S7 1137 aa13.46□□□□□ -0.25
NR1I3-225ENST00000508387 RASSF3Q86WH2 238 aa13.46□□□□□ -0.25
NR1I3-225ENST00000508387 TRIM59Q8IWR1 403 aa13.46□□□□□ -0.25
NR1I3-225ENST00000508387 TERB1Q8NA31 727 aa13.46□□□□□ -0.25
NR1I3-225ENST00000508387 CLEC4CQ8WTT0 213 aa13.46□□□□□ -0.25
NR1I3-225ENST00000508387 RLN3Q8WXF3 142 aa13.46□□□□□ -0.25
NR1I3-225ENST00000508387 KREMEN1Q96MU8 473 aa13.46□□□□□ -0.25
NR1I3-225ENST00000508387 NT5C1BQ96P26 610 aa13.46□□□□□ -0.25
NR1I3-225ENST00000508387 BBS2Q9BXC9 721 aa13.46□□□□□ -0.25
NR1I3-225ENST00000508387 SRRTQ9BXP5 876 aaKnown RBP13.46□□□□□ -0.25
NR1I3-225ENST00000508387 METTL14Q9HCE5 456 aaKnown RBP13.46□□□□□ -0.25
NR1I3-225ENST00000508387 EBF1Q9UH73 591 aa13.46□□□□□ -0.25
NR1I3-225ENST00000508387 LSM7Q9UK45 103 aaKnown RBP13.46□□□□□ -0.25
NR1I3-225ENST00000508387 CIZ1Q9ULV3 898 aaPredicted RBP13.46□□□□□ -0.25
NR1I3-225ENST00000508387 PCDHB4Q9Y5E5 795 aa13.46□□□□□ -0.25
NR1I3-225ENST00000508387 RALGAPA1Q6GYQ0 2036 aa13.46□□□□□ -0.26
NR1I3-225ENST00000508387 A0A0A0MRY4 1105 aa13.45□□□□□ -0.26
NR1I3-225ENST00000508387 TCRBV21S2A2A0A5A6 115 aa13.45□□□□□ -0.26
NR1I3-225ENST00000508387 DCDC2BA2VCK2 349 aa13.45□□□□□ -0.26
NR1I3-225ENST00000508387 TBC1D3BA6NDS4 549 aa13.45□□□□□ -0.26
NR1I3-225ENST00000508387 MSI1O43347 362 aaKnown RBP13.45□□□□□ -0.26
NR1I3-225ENST00000508387 CACNG3O60359 315 aa13.45□□□□□ -0.26
NR1I3-225ENST00000508387 RALAP11233 206 aa13.45□□□□□ -0.26
NR1I3-225ENST00000508387 VDRP11473 427 aa13.45□□□□□ -0.26
NR1I3-225ENST00000508387 LCP1P13796 627 aa13.45□□□□□ -0.26
NR1I3-225ENST00000508387 CORO1AP31146 461 aaKnown RBP13.45□□□□□ -0.26
NR1I3-225ENST00000508387 PLA2G4AP47712 749 aa13.45□□□□□ -0.26
NR1I3-225ENST00000508387 MRPS21P82921 87 aaKnown RBP13.45□□□□□ -0.26
NR1I3-225ENST00000508387 LMNB2Q03252 620 aa13.45□□□□□ -0.26
NR1I3-225ENST00000508387 BST2Q10589 180 aaKnown RBP13.45□□□□□ -0.26
NR1I3-225ENST00000508387 KCNH2Q12809 1159 aa13.45□□□□□ -0.26
NR1I3-225ENST00000508387 PUM1Q14671 1186 aaKnown RBP eCLIP13.45□□□□□ -0.26
NR1I3-225ENST00000508387 CSRP2Q16527 193 aa13.45□□□□□ -0.26
NR1I3-225ENST00000508387 BTBD8Q5XKL5 378 aa13.45□□□□□ -0.26
NR1I3-225ENST00000508387 GRAMD4Q6IC98 578 aa13.45□□□□□ -0.26
NR1I3-225ENST00000508387 GJB7Q6PEY0 223 aa13.45□□□□□ -0.26
NR1I3-225ENST00000508387 TTC39CQ8N584 583 aa13.45□□□□□ -0.26
NR1I3-225ENST00000508387 ZNF513Q8N8E2 541 aaPredicted RBP13.45□□□□□ -0.26
NR1I3-225ENST00000508387 RBBP8NLQ8NC74 664 aaPredicted RBP13.45□□□□□ -0.26
NR1I3-225ENST00000508387 EDEM1Q92611 657 aa13.45□□□□□ -0.26
NR1I3-225ENST00000508387 CNOT6LQ96LI5 555 aaKnown RBP13.45□□□□□ -0.26
NR1I3-225ENST00000508387 INTS2Q9H0H0 1204 aaKnown RBP13.45□□□□□ -0.26
NR1I3-225ENST00000508387 CLIC5Q9NZA1 410 aa13.45□□□□□ -0.26
NR1I3-225ENST00000508387 DEC1Q9P2X7 70 aa13.45□□□□□ -0.26
NR1I3-225ENST00000508387 SFMBT1Q9UHJ3 866 aa13.45□□□□□ -0.26
NR1I3-225ENST00000508387 CDV3Q9UKY7 258 aaKnown RBP13.45□□□□□ -0.26
NR1I3-225ENST00000508387 CLEC4EQ9ULY5 219 aa13.45□□□□□ -0.26
NR1I3-225ENST00000508387 RAD54BQ9Y620 910 aa13.45□□□□□ -0.26
NR1I3-225ENST00000508387 TNRC6BQ9UPQ9 1833 aaKnown RBP13.45□□□□□ -0.26
NR1I3-225ENST00000508387 SLC12A8A0AV02 714 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 BICDL2A1A5D9 508 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 YJEFN3A6XGL0 299 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.44□□□□□ -0.26
NR1I3-225ENST00000508387 E7ENQ6 273 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 M0QYV0 167 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 ZBED1O96006 694 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 TBXAS1P24557 533 aaPredicted RBP13.44□□□□□ -0.26
NR1I3-225ENST00000508387 GBP1P32455 592 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 MPLP40238 635 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 PSEN1P49768 467 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 ZNF132P52740 706 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 UBE2HP62256 183 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 GOLGA8FQ08AF8 430 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 GOLGA8DPQ0D2H9 430 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 FYB2Q5VWT5 728 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 PM20D1Q6GTS8 502 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 KIAA1211LQ6NV74 962 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 PMF1Q6P1K2 205 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 ERMP1Q7Z2K6 904 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 DENND1CQ8IV53 801 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 HMGB4Q8WW32 186 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 GTPBP4Q9BZE4 634 aaKnown RBP13.44□□□□□ -0.26
NR1I3-225ENST00000508387 UBXN6Q9BZV1 441 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 SLC6A17Q9H1V8 727 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 ACP6Q9NPH0 428 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 CD93Q9NPY3 652 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 MARK1Q9P0L2 795 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 MARCH2Q9P0N8 246 aa13.44□□□□□ -0.26
NR1I3-225ENST00000508387 HESX1Q9UBX0 185 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms