RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 NDRG1Q92597 394 aaKnown RBP11.5□□□□□ -0.57
PROM1-207ENST00000508167 NUP85Q9BW27 656 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 WDR35Q9P2L0 1181 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 HCFC2Q9Y5Z7 792 aa11.5□□□□□ -0.57
PROM1-207ENST00000508167 EPOPA6NHQ4 379 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 CEP104O60308 925 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 RFPL2O75678 378 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 RTN3O95197 1032 aaPredicted RBP11.49□□□□□ -0.57
PROM1-207ENST00000508167 DAB2IPQ5VWQ8 1189 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 SCYL2Q6P3W7 929 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 PARVAQ9NVD7 372 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 SCINQ9Y6U3 715 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 SEC24AO95486 1093 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 FGGP02679 453 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 CACNA2D1P54289 1103 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 MESDQ14696 234 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 TCEAL5Q5H9L2 206 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 PAQR9Q6ZVX9 377 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 ADGRD2Q7Z7M1 963 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 C12orf76Q8N812 135 aaPredicted RBP11.49□□□□□ -0.57
PROM1-207ENST00000508167 EDEM1Q92611 657 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 MCEEQ96PE7 176 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 ATXN3LQ9H3M9 355 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 RXFP1Q9HBX9 757 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 METTL5Q9NRN9 209 aaKnown RBP11.49□□□□□ -0.57
PROM1-207ENST00000508167 TRPM5Q9NZQ8 1165 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 ANAPC7Q9UJX3 599 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 NUDT5Q9UKK9 219 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 MYBL1P10243 752 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 RALAP11233 206 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 NCAM1P13591 858 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 DCAF6Q58WW2 860 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 EFHC1Q5JVL4 640 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 SLC35F5Q8WV83 523 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 SMG7Q92540 1137 aaKnown RBP11.49□□□□□ -0.57
PROM1-207ENST00000508167 AVENQ9NQS1 362 aaPredicted RBP11.49□□□□□ -0.57
PROM1-207ENST00000508167 TJP2Q9UDY2 1190 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 PCYOX1Q9UHG3 505 aa11.49□□□□□ -0.57
PROM1-207ENST00000508167 SPOPO43791 374 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 CLASP2O75122 1294 aaKnown RBP11.48□□□□□ -0.57
PROM1-207ENST00000508167 FBXO21O94952 628 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 GJB6O95452 261 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 ERBB2P04626 1255 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 LINC00271P0C7V0 271 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 PAFAH1B1P43034 410 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 ATP11AP98196 1134 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 C1QBPQ07021 282 aaKnown RBP11.48□□□□□ -0.57
PROM1-207ENST00000508167 TAF10Q12962 218 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 KLHL7Q8IXQ5 586 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 ASAH2Q9NR71 780 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 CYTH4Q9UIA0 394 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 AMFRQ9UKV5 643 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 SLC38A8A6NNN8 435 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 CCDC188H7C350 402 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 IVDP26440 423 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 CDH5P33151 784 aaPredicted RBP11.48□□□□□ -0.57
PROM1-207ENST00000508167 MAGEA11P43364 429 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 CLUL1Q15846 466 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 RARS2Q5T160 578 aaKnown RBP11.48□□□□□ -0.57
PROM1-207ENST00000508167 PDZD4Q76G19 769 aaPredicted RBP11.48□□□□□ -0.57
PROM1-207ENST00000508167 DNAJB7Q7Z6W7 309 aaPredicted RBP11.48□□□□□ -0.57
PROM1-207ENST00000508167 RNF168Q8IYW5 571 aaPredicted RBP11.48□□□□□ -0.57
PROM1-207ENST00000508167 EMC1Q8N766 993 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 ZNF564Q8TBZ8 553 aaPredicted RBP11.48□□□□□ -0.57
PROM1-207ENST00000508167 MRPS31Q92665 395 aaKnown RBP11.48□□□□□ -0.57
PROM1-207ENST00000508167 TRIM51Q9BSJ1 452 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 FAM204AQ9H8W3 233 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 VPS18Q9P253 973 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 RANBP2P49792 3224 aaKnown RBP11.48□□□□□ -0.57
PROM1-207ENST00000508167 RNF8O76064 485 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 PDGFRAP16234 1089 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 MMP8P22894 467 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 PSMA2P25787 234 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 SDC4P31431 198 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 CES5AQ6NT32 575 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 FAM183BPQ6ZVS7 135 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 TMC3Q7Z5M5 1100 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 SLCO2A1Q92959 643 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 CRISPLD1Q9H336 500 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 TLR8Q9NR97 1041 aaKnown RBP11.48□□□□□ -0.57
PROM1-207ENST00000508167 IRAK3Q9Y616 596 aa11.48□□□□□ -0.57
PROM1-207ENST00000508167 ZNF638Q14966 1978 aaKnown RBP11.47□□□□□ -0.57
PROM1-207ENST00000508167 CCDC195A0A1B0GUA6 201 aa11.47□□□□□ -0.57
PROM1-207ENST00000508167 KRT14P02533 472 aa11.47□□□□□ -0.57
PROM1-207ENST00000508167 TCF4P15884 667 aa11.47□□□□□ -0.57
PROM1-207ENST00000508167 GABRR2P28476 465 aa11.47□□□□□ -0.57
PROM1-207ENST00000508167 NME3Q13232 169 aa11.47□□□□□ -0.57
PROM1-207ENST00000508167 C10orf120Q5SQS8 335 aa11.47□□□□□ -0.57
PROM1-207ENST00000508167 CCDC181Q5TID7 509 aa11.47□□□□□ -0.57
PROM1-207ENST00000508167 PLEKHA7Q6IQ23 1121 aa11.47□□□□□ -0.57
PROM1-207ENST00000508167 Q7L0L9 218 aa11.47□□□□□ -0.57
PROM1-207ENST00000508167 PHF13Q86YI8 300 aaPredicted RBP11.47□□□□□ -0.57
PROM1-207ENST00000508167 GPR65Q8IYL9 337 aa11.47□□□□□ -0.57
PROM1-207ENST00000508167 TCEAL8Q8IYN2 117 aa11.47□□□□□ -0.57
PROM1-207ENST00000508167 C8orf48Q96LL4 319 aa11.47□□□□□ -0.57
PROM1-207ENST00000508167 STAP1Q9ULZ2 295 aa11.47□□□□□ -0.57
PROM1-207ENST00000508167 ABLIM3O94929 683 aa11.47□□□□□ -0.57
PROM1-207ENST00000508167 HSD17B3P37058 310 aa11.47□□□□□ -0.57
PROM1-207ENST00000508167 CAMK1Q14012 370 aa11.47□□□□□ -0.57
PROM1-207ENST00000508167 MAP9Q49MG5 647 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms