RNA–Protein interactions for RNA: ENST00000507807.3

CLPTM1L-209, Transcript of CLPTM1 like, humanhuman

TSL 1 (best) BASIC

Gene CLPTM1L, Length 1,740 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-209ENST00000507807 CYP2F1P24903 491 aa17.12■□□□□ 0.33
CLPTM1L-209ENST00000507807 RPL22P35268 128 aaKnown RBP17.12■□□□□ 0.33
CLPTM1L-209ENST00000507807 MORF4L2Q15014 288 aa17.12■□□□□ 0.33
CLPTM1L-209ENST00000507807 PPP6R3Q5H9R7 873 aaPredicted RBP17.12■□□□□ 0.33
CLPTM1L-209ENST00000507807 AGBL2Q5U5Z8 902 aa17.12■□□□□ 0.33
CLPTM1L-209ENST00000507807 PM20D1Q6GTS8 502 aa17.12■□□□□ 0.33
CLPTM1L-209ENST00000507807 PSTKQ8IV42 348 aaKnown RBP17.12■□□□□ 0.33
CLPTM1L-209ENST00000507807 CRIPAKQ8N1N5 446 aa17.12■□□□□ 0.33
CLPTM1L-209ENST00000507807 THEM5Q8N1Q8 247 aa17.12■□□□□ 0.33
CLPTM1L-209ENST00000507807 FAM71DQ8N9W8 422 aa17.12■□□□□ 0.33
CLPTM1L-209ENST00000507807 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.12■□□□□ 0.33
CLPTM1L-209ENST00000507807 USP29Q9HBJ7 922 aa17.12■□□□□ 0.33
CLPTM1L-209ENST00000507807 DNAJB4Q9UDY4 337 aa17.12■□□□□ 0.33
CLPTM1L-209ENST00000507807 STAP1Q9ULZ2 295 aa17.12■□□□□ 0.33
CLPTM1L-209ENST00000507807 COL4A4P53420 1690 aaPredicted RBP17.12■□□□□ 0.33
CLPTM1L-209ENST00000507807 OAZ2O95190 189 aa17.11■□□□□ 0.33
CLPTM1L-209ENST00000507807 TTC4O95801 387 aa17.11■□□□□ 0.33
CLPTM1L-209ENST00000507807 RDXP35241 583 aaKnown RBP17.11■□□□□ 0.33
CLPTM1L-209ENST00000507807 BCAR1P56945 870 aa17.11■□□□□ 0.33
CLPTM1L-209ENST00000507807 SKOR1P84550 965 aa17.11■□□□□ 0.33
CLPTM1L-209ENST00000507807 IFFO1Q0D2I5 559 aa17.11■□□□□ 0.33
CLPTM1L-209ENST00000507807 MAPRE1Q15691 268 aaKnown RBP17.11■□□□□ 0.33
CLPTM1L-209ENST00000507807 KRT71Q3SY84 523 aa17.11■□□□□ 0.33
CLPTM1L-209ENST00000507807 ZC3H18Q86VM9 953 aaKnown RBP17.11■□□□□ 0.33
CLPTM1L-209ENST00000507807 SCML4Q8N228 414 aa17.11■□□□□ 0.33
CLPTM1L-209ENST00000507807 PYROXD2Q8N2H3 581 aa17.11■□□□□ 0.33
CLPTM1L-209ENST00000507807 RSAD2Q8WXG1 361 aa17.11■□□□□ 0.33
CLPTM1L-209ENST00000507807 PRCCQ92733 491 aaPredicted RBP17.11■□□□□ 0.33
CLPTM1L-209ENST00000507807 PKNOX2Q96KN3 472 aa17.11■□□□□ 0.33
CLPTM1L-209ENST00000507807 CSPG4P5Q96PW8 444 aa17.11■□□□□ 0.33
CLPTM1L-209ENST00000507807 WDR6Q9NNW5 1121 aaKnown RBP17.11■□□□□ 0.33
CLPTM1L-209ENST00000507807 DMAP1Q9NPF5 467 aaPredicted RBP17.11■□□□□ 0.33
CLPTM1L-209ENST00000507807 PIGVQ9NUD9 493 aa17.11■□□□□ 0.33
CLPTM1L-209ENST00000507807 CWC15Q9P013 229 aaKnown RBP17.11■□□□□ 0.33
CLPTM1L-209ENST00000507807 SHOC2Q9UQ13 582 aa17.11■□□□□ 0.33
CLPTM1L-209ENST00000507807 M0QYT0 321 aa17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 MYCP01106 439 aaPredicted RBP17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 STIP1P31948 543 aaKnown RBP17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 TSPY1Q01534 308 aa17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 ROR1Q01973 937 aa17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 YWHAHQ04917 246 aaPredicted RBP17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 B4GALNT4Q76KP1 1039 aa17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 CPT1BQ92523 772 aa17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 TLCD1Q96CP7 247 aa17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 RTP4Q96DX8 246 aa17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 PGAP3Q96FM1 320 aaPredicted RBP17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 CASD1Q96PB1 797 aa17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 PNPLA8Q9NP80 782 aa17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 TMPRSS4Q9NRS4 437 aa17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 NINJ2Q9NZG7 142 aa17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 SHOX2O60902 331 aaPredicted RBP17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 LTFP02788 710 aa17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 OR1G1P47890 313 aa17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 LMAN1P49257 510 aa17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 NRLP54845 237 aa17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 SLC10A2Q12908 348 aaPredicted RBP17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 KYNUQ16719 465 aa17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 DARS2Q6PI48 645 aaKnown RBP17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 KDM7AQ6ZMT4 941 aa17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 UHMK1Q8TAS1 419 aaKnown RBP17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 IRGQQ8WZA9 623 aa17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 PGM2Q96G03 612 aa17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 RBM15Q96T37 977 aaKnown RBP eCLIP17.1■□□□□ 0.332e-10■■■■■ 31.3
CLPTM1L-209ENST00000507807 CENPHQ9H3R5 247 aa17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 RCOR3Q9P2K3 495 aaPredicted RBP17.1■□□□□ 0.33
CLPTM1L-209ENST00000507807 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 BCLAF3A2AJT9 711 aaKnown RBP17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 DCDC2CA8MYV0 355 aa17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 I6L893 689 aaPredicted RBP17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 ACSL3O95573 720 aa17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 CCL5P13501 91 aa17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 GOT1P17174 413 aa17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 NR1D1P20393 614 aa17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 CTCFP49711 727 aaPredicted RBP17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 MNX1P50219 401 aaPredicted RBP17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 GATMP50440 423 aa17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 RNASELQ05823 741 aaKnown RBP17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 DEUP1Q05D60 604 aa17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 DMTNQ08495 405 aa17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 ANKRD22Q5VYY1 191 aa17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 FAM43BQ6ZT52 329 aaPredicted RBP17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 HOOK3Q86VS8 718 aa17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 NLRC5Q86WI3 1866 aa17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 NAT8LQ8N9F0 302 aa17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 SEPT8Q92599 483 aa17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 SLC9A7Q96T83 725 aa17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 ZCWPW1Q9H0M4 648 aa17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 ANLNQ9NQW6 1124 aa17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 PRG3Q9Y2Y8 225 aaPredicted RBP17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 PCDHB7Q9Y5E2 793 aa17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 HEY1Q9Y5J3 304 aa17.09■□□□□ 0.33
CLPTM1L-209ENST00000507807 H7C0C1 242 aa17.08■□□□□ 0.32
CLPTM1L-209ENST00000507807 NDC80O14777 642 aa17.08■□□□□ 0.32
CLPTM1L-209ENST00000507807 PQBP1O60828 265 aaKnown RBP17.08■□□□□ 0.32
CLPTM1L-209ENST00000507807 AMHP03971 560 aa17.08■□□□□ 0.32
CLPTM1L-209ENST00000507807 ZFXP17010 805 aaPredicted RBP17.08■□□□□ 0.32
CLPTM1L-209ENST00000507807 AMPD1P23109 780 aa17.08■□□□□ 0.32
CLPTM1L-209ENST00000507807 MAGEA4P43358 317 aa17.08■□□□□ 0.32
CLPTM1L-209ENST00000507807 ATP5OP48047 213 aa17.08■□□□□ 0.32
CLPTM1L-209ENST00000507807 GBE1Q04446 702 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms