RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 C1RP00736 705 aa18.21■□□□□ 0.51
RNF4-209ENST00000507784 MYL4P12829 197 aa18.21■□□□□ 0.51
RNF4-209ENST00000507784 TCP1P17987 556 aaKnown RBP18.21■□□□□ 0.51
RNF4-209ENST00000507784 RDXP35241 583 aaKnown RBP18.21■□□□□ 0.51
RNF4-209ENST00000507784 PCK1P35558 622 aa18.21■□□□□ 0.51
RNF4-209ENST00000507784 MARCKSL1P49006 195 aa18.21■□□□□ 0.51
RNF4-209ENST00000507784 ATXN1P54253 815 aaKnown RBP18.21■□□□□ 0.51
RNF4-209ENST00000507784 RWDD2BP57060 319 aa18.21■□□□□ 0.51
RNF4-209ENST00000507784 ATP13A4Q4VNC1 1196 aa18.21■□□□□ 0.51
RNF4-209ENST00000507784 ZNF697Q5TEC3 545 aa18.21■□□□□ 0.51
RNF4-209ENST00000507784 SND1Q7KZF4 910 aaKnown RBP eCLIP18.21■□□□□ 0.51
RNF4-209ENST00000507784 BEND5Q7L4P6 421 aa18.21■□□□□ 0.51
RNF4-209ENST00000507784 TAC4Q86UU9 113 aa18.21■□□□□ 0.51
RNF4-209ENST00000507784 HDAC7Q8WUI4 952 aa18.21■□□□□ 0.51
RNF4-209ENST00000507784 OVCA2Q8WZ82 227 aa18.21■□□□□ 0.51
RNF4-209ENST00000507784 CENPIQ92674 756 aaPredicted RBP18.21■□□□□ 0.51
RNF4-209ENST00000507784 RNF34Q969K3 372 aa18.21■□□□□ 0.51
RNF4-209ENST00000507784 TRMT2BQ96GJ1 504 aaKnown RBP18.21■□□□□ 0.51
RNF4-209ENST00000507784 CAPZA3Q96KX2 299 aa18.21■□□□□ 0.51
RNF4-209ENST00000507784 MYRFLQ96LU7 910 aa18.21■□□□□ 0.51
RNF4-209ENST00000507784 CORO1BQ9BR76 489 aa18.21■□□□□ 0.51
RNF4-209ENST00000507784 ZNF334Q9HCZ1 680 aaPredicted RBP18.21■□□□□ 0.51
RNF4-209ENST00000507784 DDIT4Q9NX09 232 aa18.21■□□□□ 0.51
RNF4-209ENST00000507784 CLIC5Q9NZA1 410 aa18.21■□□□□ 0.51
RNF4-209ENST00000507784 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.21■□□□□ 0.51
RNF4-209ENST00000507784 RASAL2Q9UJF2 1139 aa18.21■□□□□ 0.51
RNF4-209ENST00000507784 USP18Q9UMW8 372 aa18.21■□□□□ 0.51
RNF4-209ENST00000507784 HCFC2Q9Y5Z7 792 aa18.21■□□□□ 0.51
RNF4-209ENST00000507784 CEP104O60308 925 aa18.2■□□□□ 0.5
RNF4-209ENST00000507784 RFPL2O75678 378 aa18.2■□□□□ 0.5
RNF4-209ENST00000507784 F9P00740 461 aa18.2■□□□□ 0.5
RNF4-209ENST00000507784 KRT1P04264 644 aa18.2■□□□□ 0.5
RNF4-209ENST00000507784 KRT7P08729 469 aa18.2■□□□□ 0.5
RNF4-209ENST00000507784 PRLRP16471 622 aa18.2■□□□□ 0.5
RNF4-209ENST00000507784 HDAC4P56524 1084 aa18.2■□□□□ 0.5
RNF4-209ENST00000507784 EFEMP1Q12805 493 aa18.2■□□□□ 0.5
RNF4-209ENST00000507784 ZNF211Q13398 564 aaPredicted RBP18.2■□□□□ 0.5
RNF4-209ENST00000507784 LRIT3Q3SXY7 679 aa18.2■□□□□ 0.5
RNF4-209ENST00000507784 C10orf120Q5SQS8 335 aa18.2■□□□□ 0.5
RNF4-209ENST00000507784 RTL10Q7L3V2 364 aa18.2■□□□□ 0.5
RNF4-209ENST00000507784 HSPH1Q92598 858 aa18.2■□□□□ 0.5
RNF4-209ENST00000507784 CASP10Q92851 521 aa18.2■□□□□ 0.5
RNF4-209ENST00000507784 ACSF2Q96CM8 615 aaPredicted RBP18.2■□□□□ 0.5
RNF4-209ENST00000507784 PBKQ96KB5 322 aa18.2■□□□□ 0.5
RNF4-209ENST00000507784 ADAM33Q9BZ11 813 aa18.2■□□□□ 0.5
RNF4-209ENST00000507784 NACA2Q9H009 215 aa18.2■□□□□ 0.5
RNF4-209ENST00000507784 CCSER2Q9H7U1 834 aa18.2■□□□□ 0.5
RNF4-209ENST00000507784 OLA1Q9NTK5 396 aaKnown RBP18.2■□□□□ 0.5
RNF4-209ENST00000507784 KLHL11Q9NVR0 708 aa18.2■□□□□ 0.5
RNF4-209ENST00000507784 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.2■□□□□ 0.5
RNF4-209ENST00000507784 DDX56Q9NY93 547 aaKnown RBP18.2■□□□□ 0.5
RNF4-209ENST00000507784 A0A1W2PPC1 479 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 ZNF840PA6NDX5 716 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 MDM4O15151 490 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 ZNF185O15231 689 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 XYLBO75191 536 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 ENDOD1O94919 500 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 ZDHHC11BP0C7U3 371 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 PTPN2P17706 415 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 IL1R2P27930 398 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 GABRR2P28476 465 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 GTF2F1P35269 517 aaKnown RBP eCLIP18.19■□□□□ 0.5
RNF4-209ENST00000507784 PPP3CCP48454 512 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 PEX5P50542 639 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 RBM10P98175 930 aaKnown RBP18.19■□□□□ 0.5
RNF4-209ENST00000507784 AMPD2Q01433 879 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 SLC25A11Q02978 314 aaKnown RBP18.19■□□□□ 0.5
RNF4-209ENST00000507784 SMTNL2Q2TAL5 461 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 PABPC1LQ4VXU2 614 aaKnown RBP18.19■□□□□ 0.5
RNF4-209ENST00000507784 KCNT1Q5JUK3 1230 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 SEL1L2Q5TEA6 688 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 OTUD1Q5VV17 481 aaPredicted RBP18.19■□□□□ 0.5
RNF4-209ENST00000507784 TXNRD3NBQ6F5E7 133 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 TADA2BQ86TJ2 420 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 FAM131BQ86XD5 332 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 CCDC50Q8IVM0 306 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 ALG3Q92685 438 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 NT5C3BQ969T7 300 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 GCNAQ96QF7 691 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 PEBP4Q96S96 227 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 CDCA3Q99618 268 aaPredicted RBP18.19■□□□□ 0.5
RNF4-209ENST00000507784 PRDM12Q9H4Q4 367 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 NSUN3Q9H649 340 aaKnown RBP18.19■□□□□ 0.5
RNF4-209ENST00000507784 CALCOCO1Q9P1Z2 691 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 CDC23Q9UJX2 597 aa18.19■□□□□ 0.5
RNF4-209ENST00000507784 PDE4DIPQ5VU43 2346 aa18.18■□□□□ 0.5
RNF4-209ENST00000507784 CCDC195A0A1B0GUA6 201 aa18.18■□□□□ 0.5
RNF4-209ENST00000507784 PI4K2BG5E9Z4 385 aa18.18■□□□□ 0.5
RNF4-209ENST00000507784 TBX18O95935 607 aa18.18■□□□□ 0.5
RNF4-209ENST00000507784 F11P03951 625 aa18.18■□□□□ 0.5
RNF4-209ENST00000507784 HNRNPA1P09651 372 aaKnown RBP eCLIP18.18■□□□□ 0.5
RNF4-209ENST00000507784 RARAP10276 462 aa18.18■□□□□ 0.5
RNF4-209ENST00000507784 TUBB2AQ13885 445 aa18.18■□□□□ 0.5
RNF4-209ENST00000507784 BOLA3Q53S33 107 aa18.18■□□□□ 0.5
RNF4-209ENST00000507784 HECTD3Q5T447 861 aa18.18■□□□□ 0.5
RNF4-209ENST00000507784 CCDC181Q5TID7 509 aa18.18■□□□□ 0.5
RNF4-209ENST00000507784 LRRC38Q5VT99 294 aa18.18■□□□□ 0.5
RNF4-209ENST00000507784 MSANTD2Q6P1R3 559 aa18.18■□□□□ 0.5
RNF4-209ENST00000507784 KCTD6Q8NC69 237 aa18.18■□□□□ 0.5
RNF4-209ENST00000507784 COG1Q8WTW3 980 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms