RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 PATJQ8NI35 1801 aa16.38■□□□□ 0.21
COL1A1-211ENST00000507689 COL4A2P08572 1712 aa16.37■□□□□ 0.21
COL1A1-211ENST00000507689 PIK3R2O00459 728 aa16.37■□□□□ 0.21
COL1A1-211ENST00000507689 CAPN9O14815 690 aa16.37■□□□□ 0.21
COL1A1-211ENST00000507689 MDM4O15151 490 aa16.37■□□□□ 0.21
COL1A1-211ENST00000507689 EGFP01133 1207 aa16.37■□□□□ 0.21
COL1A1-211ENST00000507689 CYBBP04839 570 aa16.37■□□□□ 0.21
COL1A1-211ENST00000507689 PGFP49763 221 aa16.37■□□□□ 0.21
COL1A1-211ENST00000507689 TPM4P67936 248 aa16.37■□□□□ 0.21
COL1A1-211ENST00000507689 KRT31Q15323 416 aa16.37■□□□□ 0.21
COL1A1-211ENST00000507689 PKDCCQ504Y2 493 aa16.37■□□□□ 0.21
COL1A1-211ENST00000507689 PMF1Q6P1K2 205 aa16.37■□□□□ 0.21
COL1A1-211ENST00000507689 RHBDF2Q6PJF5 856 aa16.37■□□□□ 0.21
COL1A1-211ENST00000507689 ZNF687Q8N1G0 1237 aa16.37■□□□□ 0.21
COL1A1-211ENST00000507689 STK32AQ8WU08 396 aa16.37■□□□□ 0.21
COL1A1-211ENST00000507689 FAM149B1Q96BN6 582 aa16.37■□□□□ 0.21
COL1A1-211ENST00000507689 PLD4Q96BZ4 506 aa16.37■□□□□ 0.21
COL1A1-211ENST00000507689 BBS2Q9BXC9 721 aa16.37■□□□□ 0.21
COL1A1-211ENST00000507689 PRMT8Q9NR22 394 aaPredicted RBP16.37■□□□□ 0.21
COL1A1-211ENST00000507689 DEC1Q9P2X7 70 aa16.37■□□□□ 0.21
COL1A1-211ENST00000507689 COL4A3Q01955 1670 aa16.37■□□□□ 0.21
COL1A1-211ENST00000507689 BECN2A8MW95 431 aa16.36■□□□□ 0.21
COL1A1-211ENST00000507689 RNF40O75150 1001 aa16.36■□□□□ 0.21
COL1A1-211ENST00000507689 LTFP02788 710 aa16.36■□□□□ 0.21
COL1A1-211ENST00000507689 DAOAP59103 153 aa16.36■□□□□ 0.21
COL1A1-211ENST00000507689 CDKAL1Q5VV42 579 aa16.36■□□□□ 0.21
COL1A1-211ENST00000507689 TPGS1Q6ZTW0 290 aa16.36■□□□□ 0.21
COL1A1-211ENST00000507689 C11orf57Q6ZUT1 292 aaPredicted RBP16.36■□□□□ 0.21
COL1A1-211ENST00000507689 FMNL3Q8IVF7 1028 aa16.36■□□□□ 0.21
COL1A1-211ENST00000507689 MSANTD4Q8NCY6 345 aa16.36■□□□□ 0.21
COL1A1-211ENST00000507689 IPO4Q8TEX9 1081 aaKnown RBP16.36■□□□□ 0.21
COL1A1-211ENST00000507689 EDEM1Q92611 657 aa16.36■□□□□ 0.21
COL1A1-211ENST00000507689 ARHGEF4Q9NR80 690 aa16.36■□□□□ 0.21
COL1A1-211ENST00000507689 TMEM63CQ9P1W3 806 aa16.36■□□□□ 0.21
COL1A1-211ENST00000507689 RAB23Q9ULC3 237 aa16.36■□□□□ 0.21
COL1A1-211ENST00000507689 HBS1LQ9Y450 684 aaKnown RBP16.36■□□□□ 0.21
COL1A1-211ENST00000507689 DAAM1Q9Y4D1 1078 aa16.36■□□□□ 0.21
COL1A1-211ENST00000507689 MUC6Q6W4X9 2439 aa16.36■□□□□ 0.21
COL1A1-211ENST00000507689 KIF26AQ9ULI4 1882 aaPredicted RBP16.35■□□□□ 0.21
COL1A1-211ENST00000507689 TBC1D3BA6NDS4 549 aa16.35■□□□□ 0.21
COL1A1-211ENST00000507689 YJEFN3A6XGL0 299 aa16.35■□□□□ 0.21
COL1A1-211ENST00000507689 E7ENQ6 273 aa16.35■□□□□ 0.21
COL1A1-211ENST00000507689 PROB1E7EW31 1015 aa16.35■□□□□ 0.21
COL1A1-211ENST00000507689 NEDD8-MDP1E9PL57 170 aa16.35■□□□□ 0.21
COL1A1-211ENST00000507689 HOXC11O43248 304 aaPredicted RBP16.35■□□□□ 0.21
COL1A1-211ENST00000507689 GFRA3O60609 400 aa16.35■□□□□ 0.21
COL1A1-211ENST00000507689 STC2O76061 302 aa16.35■□□□□ 0.21
COL1A1-211ENST00000507689 CALCAP01258 141 aa16.35■□□□□ 0.21
COL1A1-211ENST00000507689 NCAM1P13591 858 aa16.35■□□□□ 0.21
COL1A1-211ENST00000507689 CORO1AP31146 461 aaKnown RBP16.35■□□□□ 0.21
COL1A1-211ENST00000507689 GRIA2P42262 883 aa16.35■□□□□ 0.21
COL1A1-211ENST00000507689 GPD2P43304 727 aa16.35■□□□□ 0.21
COL1A1-211ENST00000507689 APBA1Q02410 837 aa16.35■□□□□ 0.21
COL1A1-211ENST00000507689 DRAP1Q14919 205 aaPredicted RBP16.35■□□□□ 0.21
COL1A1-211ENST00000507689 ANO6Q4KMQ2 910 aa16.35■□□□□ 0.21
COL1A1-211ENST00000507689 KLHDC7AQ5VTJ3 777 aa16.35■□□□□ 0.21
COL1A1-211ENST00000507689 DENND1BQ6P3S1 775 aa16.35■□□□□ 0.21
COL1A1-211ENST00000507689 Q6ZS52 159 aa16.35■□□□□ 0.21
COL1A1-211ENST00000507689 AOPEPQ8N6M6 819 aa16.35■□□□□ 0.21
COL1A1-211ENST00000507689 NDRG1Q92597 394 aaKnown RBP16.35■□□□□ 0.21
COL1A1-211ENST00000507689 SPAG5Q96R06 1193 aa16.35■□□□□ 0.21
COL1A1-211ENST00000507689 HINFPQ9BQA5 517 aa16.35■□□□□ 0.21
COL1A1-211ENST00000507689 R4GN57 208 aa16.35■□□□□ 0.21
COL1A1-211ENST00000507689 FOXN3O00409 490 aaPredicted RBP16.34■□□□□ 0.21
COL1A1-211ENST00000507689 ZBTB24O43167 697 aaPredicted RBP16.34■□□□□ 0.21
COL1A1-211ENST00000507689 KAT7O95251 611 aa16.34■□□□□ 0.21
COL1A1-211ENST00000507689 LMNAP02545 664 aaKnown RBP16.34■□□□□ 0.21
COL1A1-211ENST00000507689 UCHL3P15374 230 aa16.34■□□□□ 0.21
COL1A1-211ENST00000507689 OPRD1P41143 372 aa16.34■□□□□ 0.21
COL1A1-211ENST00000507689 SEC13P55735 322 aa16.34■□□□□ 0.21
COL1A1-211ENST00000507689 ZNF445P59923 1031 aa16.34■□□□□ 0.21
COL1A1-211ENST00000507689 SATB1Q01826 763 aa16.34■□□□□ 0.21
COL1A1-211ENST00000507689 UBXN1Q04323 297 aa16.34■□□□□ 0.21
COL1A1-211ENST00000507689 KDSRQ06136 332 aa16.34■□□□□ 0.21
COL1A1-211ENST00000507689 E2F5Q15329 346 aa16.34■□□□□ 0.21
COL1A1-211ENST00000507689 FILIP1LQ4L180 1135 aa16.34■□□□□ 0.21
COL1A1-211ENST00000507689 GRAMD4Q6IC98 578 aa16.34■□□□□ 0.21
COL1A1-211ENST00000507689 TSSK4Q6SA08 328 aa16.34■□□□□ 0.21
COL1A1-211ENST00000507689 TRMT11Q7Z4G4 463 aaKnown RBP16.34■□□□□ 0.21
COL1A1-211ENST00000507689 TMEM25Q86YD3 366 aa16.34■□□□□ 0.21
COL1A1-211ENST00000507689 DENND1CQ8IV53 801 aa16.34■□□□□ 0.21
COL1A1-211ENST00000507689 UNC45BQ8IWX7 931 aa16.34■□□□□ 0.21
COL1A1-211ENST00000507689 SCUBE3Q8IX30 993 aa16.34■□□□□ 0.21
COL1A1-211ENST00000507689 NAT16Q8N8M0 369 aa16.34■□□□□ 0.21
COL1A1-211ENST00000507689 NEK11Q8NG66 645 aa16.34■□□□□ 0.21
COL1A1-211ENST00000507689 RPLP0P6Q8NHW5 317 aa16.34■□□□□ 0.21
COL1A1-211ENST00000507689 ZSWIM1Q9BR11 485 aa16.34■□□□□ 0.21
COL1A1-211ENST00000507689 STK33Q9BYT3 514 aa16.34■□□□□ 0.21
COL1A1-211ENST00000507689 SIX2Q9NPC8 291 aa16.34■□□□□ 0.21
COL1A1-211ENST00000507689 PLCB1Q9NQ66 1216 aa16.34■□□□□ 0.21
COL1A1-211ENST00000507689 DNAJC17Q9NVM6 304 aaKnown RBP16.34■□□□□ 0.21
COL1A1-211ENST00000507689 CHURC1-FNTBB4DL54 471 aa16.33■□□□□ 0.2
COL1A1-211ENST00000507689 PAPSS2O95340 614 aaPredicted RBP16.33■□□□□ 0.2
COL1A1-211ENST00000507689 TYRP14679 529 aa16.33■□□□□ 0.2
COL1A1-211ENST00000507689 TNFRSF4P43489 277 aa16.33■□□□□ 0.2
COL1A1-211ENST00000507689 SLC11A2P49281 568 aa16.33■□□□□ 0.2
COL1A1-211ENST00000507689 COPB1P53618 953 aaKnown RBP16.33■□□□□ 0.2
COL1A1-211ENST00000507689 MRPS21P82921 87 aaKnown RBP16.33■□□□□ 0.2
COL1A1-211ENST00000507689 PDCLQ13371 301 aa16.33■□□□□ 0.2
COL1A1-211ENST00000507689 SYCP1Q15431 976 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms