RNA–Protein interactions for RNA: ENST00000507001.1

SPCS3-202, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 478 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-202ENST00000507001 SIMC1Q8NDZ2 872 aa5.64□□□□□ -1.51
SPCS3-202ENST00000507001 IL17REQ8NFR9 667 aa5.64□□□□□ -1.51
SPCS3-202ENST00000507001 SPPL3Q8TCT6 385 aa5.64□□□□□ -1.51
SPCS3-202ENST00000507001 ABHD5Q8WTS1 349 aa5.64□□□□□ -1.51
SPCS3-202ENST00000507001 AFG1LQ8WV93 481 aa5.64□□□□□ -1.51
SPCS3-202ENST00000507001 LPIN2Q92539 896 aa5.64□□□□□ -1.51
SPCS3-202ENST00000507001 USP13Q92995 863 aaPredicted RBP5.64□□□□□ -1.51
SPCS3-202ENST00000507001 ZDHHC12Q96GR4 267 aa5.64□□□□□ -1.51
SPCS3-202ENST00000507001 TRAPPC9Q96Q05 1148 aa5.64□□□□□ -1.51
SPCS3-202ENST00000507001 HAPLN3Q96S86 360 aa5.64□□□□□ -1.51
SPCS3-202ENST00000507001 PYM1Q9BRP8 204 aaKnown RBP5.64□□□□□ -1.51
SPCS3-202ENST00000507001 DDX23Q9BUQ8 820 aaKnown RBP5.64□□□□□ -1.51
SPCS3-202ENST00000507001 TAF1DQ9H5J8 278 aaPredicted RBP5.64□□□□□ -1.51
SPCS3-202ENST00000507001 INTS13Q9NVM9 706 aa5.64□□□□□ -1.51
SPCS3-202ENST00000507001 TBCCD1Q9NVR7 557 aa5.64□□□□□ -1.51
SPCS3-202ENST00000507001 IFT80Q9P2H3 777 aaPredicted RBP5.64□□□□□ -1.51
SPCS3-202ENST00000507001 PDP2Q9P2J9 529 aa5.64□□□□□ -1.51
SPCS3-202ENST00000507001 SLC27A6Q9Y2P4 619 aa5.64□□□□□ -1.51
SPCS3-202ENST00000507001 CRYL1Q9Y2S2 319 aa5.64□□□□□ -1.51
SPCS3-202ENST00000507001 PNMA6EA0A0J9YXQ4 647 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 FAM90A18PA6NE21 464 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 FAM90A16PA6NEW6 464 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 FAM90A9PA6NNJ1 464 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 FAM90A5PA8MXJ8 464 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 H0Y3Z8 333 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 RPP40O75818 363 aaKnown RBP5.63□□□□□ -1.51
SPCS3-202ENST00000507001 FAM90A15PP0C7V4 464 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 FAM90A14PP0C7W9 464 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 CLCN2P51788 898 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 SEC24CP53992 1094 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 ANKRD45Q5TZF3 282 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 MAVSQ7Z434 540 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 CPOQ8IVL8 374 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 HERC6Q8IVU3 1022 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 IZUMO1Q8IYV9 350 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 NRSN1Q8IZ57 195 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 FSTL5Q8N475 847 aaPredicted RBP5.63□□□□□ -1.51
SPCS3-202ENST00000507001 SSH3Q8TE77 659 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 THAP4Q8WY91 577 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 MCRS1Q96EZ8 462 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 WDR24Q96S15 920 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 WDR11Q9BZH6 1224 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 ELAC1Q9H777 363 aaKnown RBP5.63□□□□□ -1.51
SPCS3-202ENST00000507001 CYP4F11Q9HBI6 524 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 SEPSECSQ9HD40 501 aaKnown RBP5.63□□□□□ -1.51
SPCS3-202ENST00000507001 ZNF69Q9UC07 566 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 USP22Q9UPT9 525 aa5.63□□□□□ -1.51
SPCS3-202ENST00000507001 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.63□□□□□ -1.51
SPCS3-202ENST00000507001 A0A1B0GVC2 190 aa5.62□□□□□ -1.51
SPCS3-202ENST00000507001 KIF28PB7ZC32 967 aa5.62□□□□□ -1.51
SPCS3-202ENST00000507001 SNX2O60749 519 aa5.62□□□□□ -1.51
SPCS3-202ENST00000507001 CBFA2T3O75081 653 aa5.62□□□□□ -1.51
SPCS3-202ENST00000507001 EGR2P11161 476 aaPredicted RBP5.62□□□□□ -1.51
SPCS3-202ENST00000507001 EPHA3P29320 983 aa5.62□□□□□ -1.51
SPCS3-202ENST00000507001 ZEB1P37275 1124 aaPredicted RBP5.62□□□□□ -1.51
SPCS3-202ENST00000507001 CLK3P49761 638 aaKnown RBP5.62□□□□□ -1.51
SPCS3-202ENST00000507001 MTHFSP49914 203 aa5.62□□□□□ -1.51
SPCS3-202ENST00000507001 POLE2P56282 527 aa5.62□□□□□ -1.51
SPCS3-202ENST00000507001 FAM110CQ1W6H9 321 aa5.62□□□□□ -1.51
SPCS3-202ENST00000507001 ATPAF1Q5TC12 328 aaPredicted RBP5.62□□□□□ -1.51
SPCS3-202ENST00000507001 GPR149Q86SP6 731 aa5.62□□□□□ -1.51
SPCS3-202ENST00000507001 TMTC1Q8IUR5 882 aa5.62□□□□□ -1.51
SPCS3-202ENST00000507001 LCORLQ8N3X6 602 aa5.62□□□□□ -1.51
SPCS3-202ENST00000507001 B3GALNT2Q8NCR0 500 aa5.62□□□□□ -1.51
SPCS3-202ENST00000507001 SUPT20HQ8NEM7 779 aa5.62□□□□□ -1.51
SPCS3-202ENST00000507001 SUN3Q8TAQ9 357 aa5.62□□□□□ -1.51
SPCS3-202ENST00000507001 MYCBPAPQ8TBZ2 947 aa5.62□□□□□ -1.51
SPCS3-202ENST00000507001 ASB10Q8WXI3 467 aa5.62□□□□□ -1.51
SPCS3-202ENST00000507001 GLG1Q92896 1179 aa5.62□□□□□ -1.51
SPCS3-202ENST00000507001 C3orf49Q96BT1 292 aa5.62□□□□□ -1.51
SPCS3-202ENST00000507001 MPP4Q96JB8 637 aa5.62□□□□□ -1.51
SPCS3-202ENST00000507001 VN1R3Q9BXE9 311 aa5.62□□□□□ -1.51
SPCS3-202ENST00000507001 VPS16Q9H269 839 aa5.62□□□□□ -1.51
SPCS3-202ENST00000507001 RIC8AQ9NPQ8 531 aa5.62□□□□□ -1.51
SPCS3-202ENST00000507001 TESQ9UGI8 421 aaKnown RBP5.62□□□□□ -1.51
SPCS3-202ENST00000507001 DRG1Q9Y295 367 aaKnown RBP5.62□□□□□ -1.51
SPCS3-202ENST00000507001 FER1L4A9Z1Z3 1794 aa5.62□□□□□ -1.51
SPCS3-202ENST00000507001 KRT38O76015 456 aa5.61□□□□□ -1.51
SPCS3-202ENST00000507001 CER1O95813 267 aa5.61□□□□□ -1.51
SPCS3-202ENST00000507001 ITGAMP11215 1152 aa5.61□□□□□ -1.51
SPCS3-202ENST00000507001 RXRAP19793 462 aa5.61□□□□□ -1.51
SPCS3-202ENST00000507001 COL15A1P39059 1388 aa5.61□□□□□ -1.51
SPCS3-202ENST00000507001 PBX1P40424 430 aa5.61□□□□□ -1.51
SPCS3-202ENST00000507001 AVPR1BP47901 424 aa5.61□□□□□ -1.51
SPCS3-202ENST00000507001 TIRAPP58753 221 aa5.61□□□□□ -1.51
SPCS3-202ENST00000507001 SIM2Q14190 667 aaPredicted RBP5.61□□□□□ -1.51
SPCS3-202ENST00000507001 SF3B3Q15393 1217 aaKnown RBP5.61□□□□□ -1.51
SPCS3-202ENST00000507001 P3H1Q32P28 736 aa5.61□□□□□ -1.51
SPCS3-202ENST00000507001 TMEM196Q5HYL7 178 aa5.61□□□□□ -1.51
SPCS3-202ENST00000507001 TTC22Q5TAA0 569 aa5.61□□□□□ -1.51
SPCS3-202ENST00000507001 MSANTD2Q6P1R3 559 aa5.61□□□□□ -1.51
SPCS3-202ENST00000507001 NFRKBQ6P4R8 1299 aa5.61□□□□□ -1.51
SPCS3-202ENST00000507001 DPY19L3Q6ZPD9 716 aa5.61□□□□□ -1.51
SPCS3-202ENST00000507001 RAB11FIP2Q7L804 512 aa5.61□□□□□ -1.51
SPCS3-202ENST00000507001 HEATR4Q86WZ0 1026 aa5.61□□□□□ -1.51
SPCS3-202ENST00000507001 R3HDM4Q96D70 268 aa5.61□□□□□ -1.51
SPCS3-202ENST00000507001 PTCD3Q96EY7 689 aaKnown RBP5.61□□□□□ -1.51
SPCS3-202ENST00000507001 COQ10AQ96MF6 247 aa5.61□□□□□ -1.51
SPCS3-202ENST00000507001 COG8Q96MW5 612 aa5.61□□□□□ -1.51
SPCS3-202ENST00000507001 BRD8Q9H0E9 1235 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms