RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 LRFN3Q9BTN0 628 aa19.02■□□□□ 0.64
NPHP4-210ENST00000506941 DDX23Q9BUQ8 820 aaKnown RBP19.02■□□□□ 0.64
NPHP4-210ENST00000506941 EDEM3Q9BZQ6 932 aa19.02■□□□□ 0.64
NPHP4-210ENST00000506941 TBC1D17Q9HA65 648 aa19.02■□□□□ 0.64
NPHP4-210ENST00000506941 PIAS3Q9Y6X2 628 aa19.02■□□□□ 0.64
NPHP4-210ENST00000506941 ITIH6Q6UXX5 1313 aa19.01■□□□□ 0.63
NPHP4-210ENST00000506941 A0A1W2PQJ5 194 aa19.01■□□□□ 0.63
NPHP4-210ENST00000506941 SART1O43290 800 aaKnown RBP19.01■□□□□ 0.63
NPHP4-210ENST00000506941 STC2O76061 302 aa19.01■□□□□ 0.63
NPHP4-210ENST00000506941 GYPCP04921 128 aa19.01■□□□□ 0.63
NPHP4-210ENST00000506941 CD72P21854 359 aa19.01■□□□□ 0.63
NPHP4-210ENST00000506941 GABRB2P47870 512 aa19.01■□□□□ 0.63
NPHP4-210ENST00000506941 IFNAR2P48551 515 aa19.01■□□□□ 0.63
NPHP4-210ENST00000506941 PRKCQQ04759 706 aa19.01■□□□□ 0.63
NPHP4-210ENST00000506941 RUNX3Q13761 415 aa19.01■□□□□ 0.63
NPHP4-210ENST00000506941 ITPRIPL2Q3MIP1 535 aa19.01■□□□□ 0.63
NPHP4-210ENST00000506941 C2CD6Q53TS8 623 aa19.01■□□□□ 0.63
NPHP4-210ENST00000506941 OLFML1Q6UWY5 402 aa19.01■□□□□ 0.63
NPHP4-210ENST00000506941 FMNL3Q8IVF7 1028 aa19.01■□□□□ 0.63
NPHP4-210ENST00000506941 BBS7Q8IWZ6 715 aa19.01■□□□□ 0.63
NPHP4-210ENST00000506941 KIAA1958Q8N8K9 716 aa19.01■□□□□ 0.63
NPHP4-210ENST00000506941 RNF139Q8WU17 664 aa19.01■□□□□ 0.63
NPHP4-210ENST00000506941 FAM149B1Q96BN6 582 aa19.01■□□□□ 0.63
NPHP4-210ENST00000506941 AGPAT1Q99943 283 aa19.01■□□□□ 0.63
NPHP4-210ENST00000506941 NUP58Q9BVL2 599 aa19.01■□□□□ 0.63
NPHP4-210ENST00000506941 OLA1Q9NTK5 396 aaKnown RBP19.01■□□□□ 0.63
NPHP4-210ENST00000506941 AIPL1Q9NZN9 384 aa19.01■□□□□ 0.63
NPHP4-210ENST00000506941 SFMBT1Q9UHJ3 866 aa19.01■□□□□ 0.63
NPHP4-210ENST00000506941 NAALADL1Q9UQQ1 740 aa19.01■□□□□ 0.63
NPHP4-210ENST00000506941 SH3BP1Q9Y3L3 701 aa19.01■□□□□ 0.63
NPHP4-210ENST00000506941 MSI1O43347 362 aaKnown RBP19■□□□□ 0.63
NPHP4-210ENST00000506941 CBFA2T2O43439 604 aa19■□□□□ 0.63
NPHP4-210ENST00000506941 TPM3P06753 285 aa19■□□□□ 0.63
NPHP4-210ENST00000506941 HMBSP08397 361 aa19■□□□□ 0.63
NPHP4-210ENST00000506941 ASIC2Q16515 512 aa19■□□□□ 0.63
NPHP4-210ENST00000506941 SFMBT2Q5VUG0 894 aa19■□□□□ 0.63
NPHP4-210ENST00000506941 SYPL2Q5VXT5 272 aa19■□□□□ 0.63
NPHP4-210ENST00000506941 OR6B2Q6IFH4 312 aa19■□□□□ 0.63
NPHP4-210ENST00000506941 Q6ZNB5 142 aa19■□□□□ 0.63
NPHP4-210ENST00000506941 HTR3DQ70Z44 454 aa19■□□□□ 0.63
NPHP4-210ENST00000506941 ERICH1Q86X53 443 aa19■□□□□ 0.63
NPHP4-210ENST00000506941 FBXL6Q8N531 539 aa19■□□□□ 0.63
NPHP4-210ENST00000506941 FLCNQ8NFG4 579 aa19■□□□□ 0.63
NPHP4-210ENST00000506941 IPO4Q8TEX9 1081 aaKnown RBP19■□□□□ 0.63
NPHP4-210ENST00000506941 GOLGA1Q92805 767 aa19■□□□□ 0.63
NPHP4-210ENST00000506941 ATP2A3Q93084 1043 aa19■□□□□ 0.63
NPHP4-210ENST00000506941 FOXQ1Q9C009 403 aa19■□□□□ 0.63
NPHP4-210ENST00000506941 MFSD1Q9H3U5 465 aa19■□□□□ 0.63
NPHP4-210ENST00000506941 SYNCQ9H7C4 482 aa19■□□□□ 0.63
NPHP4-210ENST00000506941 ECT2Q9H8V3 914 aa19■□□□□ 0.63
NPHP4-210ENST00000506941 SLC12A8A0AV02 714 aa18.99■□□□□ 0.63
NPHP4-210ENST00000506941 SPECC1L-ADORA2AF8WAN1 911 aa18.99■□□□□ 0.63
NPHP4-210ENST00000506941 KLKB1P03952 638 aa18.99■□□□□ 0.63
NPHP4-210ENST00000506941 CYP17A1P05093 508 aa18.99■□□□□ 0.63
NPHP4-210ENST00000506941 UNGP13051 313 aaPredicted RBP18.99■□□□□ 0.63
NPHP4-210ENST00000506941 NCAM1P13591 858 aa18.99■□□□□ 0.63
NPHP4-210ENST00000506941 CTHP32929 405 aa18.99■□□□□ 0.63
NPHP4-210ENST00000506941 KPNA1P52294 538 aaPredicted RBP18.99■□□□□ 0.63
NPHP4-210ENST00000506941 MLLT6P55198 1093 aaPredicted RBP18.99■□□□□ 0.63
NPHP4-210ENST00000506941 YWHAZP63104 245 aaKnown RBP18.99■□□□□ 0.63
NPHP4-210ENST00000506941 COG7P83436 770 aa18.99■□□□□ 0.63
NPHP4-210ENST00000506941 GOLGA8FQ08AF8 430 aa18.99■□□□□ 0.63
NPHP4-210ENST00000506941 GOLGA8DPQ0D2H9 430 aa18.99■□□□□ 0.63
NPHP4-210ENST00000506941 CLEC16AQ2KHT3 1053 aa18.99■□□□□ 0.63
NPHP4-210ENST00000506941 TXNDC11Q6PKC3 985 aa18.99■□□□□ 0.63
NPHP4-210ENST00000506941 SARM1Q6SZW1 724 aa18.99■□□□□ 0.63
NPHP4-210ENST00000506941 TRIM72Q6ZMU5 477 aa18.99■□□□□ 0.63
NPHP4-210ENST00000506941 XYLT1Q86Y38 959 aa18.99■□□□□ 0.63
NPHP4-210ENST00000506941 SLC30A5Q8TAD4 765 aa18.99■□□□□ 0.63
NPHP4-210ENST00000506941 DQX1Q8TE96 717 aaKnown RBP18.99■□□□□ 0.63
NPHP4-210ENST00000506941 CPLX3Q8WVH0 158 aa18.99■□□□□ 0.63
NPHP4-210ENST00000506941 SHDQ96IW2 340 aa18.99■□□□□ 0.63
NPHP4-210ENST00000506941 POPDC2Q9HBU9 364 aa18.99■□□□□ 0.63
NPHP4-210ENST00000506941 STRIP2Q9ULQ0 834 aa18.99■□□□□ 0.63
NPHP4-210ENST00000506941 CAPN11Q9UMQ6 739 aa18.99■□□□□ 0.63
NPHP4-210ENST00000506941 MTF2Q9Y483 593 aaPredicted RBP18.99■□□□□ 0.63
NPHP4-210ENST00000506941 KANSL1LA0AUZ9 987 aa18.98■□□□□ 0.63
NPHP4-210ENST00000506941 SLC9A3R1O14745 358 aaPredicted RBP18.98■□□□□ 0.63
NPHP4-210ENST00000506941 GRAP2O75791 330 aa18.98■□□□□ 0.63
NPHP4-210ENST00000506941 CCDC172P0C7W6 258 aa18.98■□□□□ 0.63
NPHP4-210ENST00000506941 GLULP15104 373 aa18.98■□□□□ 0.63
NPHP4-210ENST00000506941 PRKCIP41743 596 aa18.98■□□□□ 0.63
NPHP4-210ENST00000506941 VCPP55072 806 aaKnown RBP18.98■□□□□ 0.63
NPHP4-210ENST00000506941 PITX1P78337 314 aaPredicted RBP18.98■□□□□ 0.63
NPHP4-210ENST00000506941 SLC6A3Q01959 620 aa18.98■□□□□ 0.63
NPHP4-210ENST00000506941 CENPCQ03188 943 aa18.98■□□□□ 0.63
NPHP4-210ENST00000506941 GAB4Q2WGN9 574 aa18.98■□□□□ 0.63
NPHP4-210ENST00000506941 NAIF1Q69YI7 327 aaPredicted RBP18.98■□□□□ 0.63
NPHP4-210ENST00000506941 MMS22LQ6ZRQ5 1243 aa18.98■□□□□ 0.63
NPHP4-210ENST00000506941 BEND5Q7L4P6 421 aa18.98■□□□□ 0.63
NPHP4-210ENST00000506941 SLC26A9Q7LBE3 791 aa18.98■□□□□ 0.63
NPHP4-210ENST00000506941 VSTM4Q8IW00 320 aa18.98■□□□□ 0.63
NPHP4-210ENST00000506941 ADGRG2Q8IZP9 1017 aa18.98■□□□□ 0.63
NPHP4-210ENST00000506941 ZNF687Q8N1G0 1237 aa18.98■□□□□ 0.63
NPHP4-210ENST00000506941 CPA6Q8N4T0 437 aa18.98■□□□□ 0.63
NPHP4-210ENST00000506941 C18orf8Q96DM3 657 aa18.98■□□□□ 0.63
NPHP4-210ENST00000506941 SLC2A13Q96QE2 648 aa18.98■□□□□ 0.63
NPHP4-210ENST00000506941 HAUS4Q9H6D7 363 aa18.98■□□□□ 0.63
NPHP4-210ENST00000506941 C8orf33Q9H7E9 229 aaPredicted RBP18.98■□□□□ 0.63
NPHP4-210ENST00000506941 SEPT11Q9NVA2 429 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms