RNA–Protein interactions for RNA: ENST00000506831.1

CCHCR1-220, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-220ENST00000506831 FAM35AQ86V20 835 aa11.96□□□□□ -0.49
CCHCR1-220ENST00000506831 BBS7Q8IWZ6 715 aa11.96□□□□□ -0.49
CCHCR1-220ENST00000506831 PGBD3Q8N328 593 aa11.96□□□□□ -0.49
CCHCR1-220ENST00000506831 ZNF513Q8N8E2 541 aaPredicted RBP11.96□□□□□ -0.49
CCHCR1-220ENST00000506831 TERB1Q8NA31 727 aa11.96□□□□□ -0.49
CCHCR1-220ENST00000506831 SCAMP5Q8TAC9 235 aa11.96□□□□□ -0.49
CCHCR1-220ENST00000506831 HMGB4Q8WW32 186 aa11.96□□□□□ -0.49
CCHCR1-220ENST00000506831 GATA6Q92908 595 aa11.96□□□□□ -0.49
CCHCR1-220ENST00000506831 SCNM1Q9BWG6 230 aa11.96□□□□□ -0.49
CCHCR1-220ENST00000506831 FBXO44Q9H4M3 255 aa11.96□□□□□ -0.49
CCHCR1-220ENST00000506831 CSNK1G1Q9HCP0 422 aa11.96□□□□□ -0.49
CCHCR1-220ENST00000506831 TRAF3IP3Q9Y228 551 aa11.96□□□□□ -0.49
CCHCR1-220ENST00000506831 ZFYVE26Q68DK2 2539 aa11.96□□□□□ -0.5
CCHCR1-220ENST00000506831 ZZEF1O43149 2961 aa11.96□□□□□ -0.5
CCHCR1-220ENST00000506831 MYH10P35580 1976 aa11.96□□□□□ -0.5
CCHCR1-220ENST00000506831 PKD1L2Q7Z442 2459 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 BICDL2A1A5D9 508 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 H0Y626 953 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 SCAMP3O14828 347 aaKnown RBP11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 ZBTB24O43167 697 aaPredicted RBP11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 EXOC3O60645 756 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 PHACTR2O75167 634 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 TRIM16O95361 564 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 NR3C1P04150 777 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 SERPINF2P08697 491 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 NTSR1P30989 418 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 LRRC63Q05C16 580 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 KDSRQ06136 332 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 IFRD2Q12894 506 aaPredicted RBP11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 HNRNPDQ14103 355 aaKnown RBP11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 EDRF1Q3B7T1 1238 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 CT47A1Q5JQC4 288 aaPredicted RBP11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 ANKRD40Q6AI12 368 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 TTI2Q6NXR4 508 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 TMEM25Q86YD3 366 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 FUKQ8N0W3 1084 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 CRYBG2Q8N1P7 616 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 FRMD1Q8N878 549 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 DEFB124Q8NES8 71 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 PARD3BQ8TEW8 1205 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 MED10Q9BTT4 135 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 CCSER2Q9H7U1 834 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 MARK1Q9P0L2 795 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 RWDD2AQ9UIY3 292 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 NEUROG3Q9Y4Z2 214 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 WDFY3Q8IZQ1 3526 aa11.95□□□□□ -0.5
CCHCR1-220ENST00000506831 A0A1W2PQF6 199 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 CACNG3O60359 315 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 TLR5O60602 858 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 C4BPAP04003 597 aaKnown RBP11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 P4HA1P13674 534 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 GABRG2P18507 467 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 ITPKAP23677 461 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 NR2F2P24468 414 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 ERCC5P28715 1186 aaPredicted RBP11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 RDXP35241 583 aaKnown RBP11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 ATXN3P54252 364 aaPredicted RBP11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 CDH8P55286 799 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 ZNF445P59923 1031 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 RPL6Q02878 288 aaKnown RBP11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 GFPT1Q06210 699 aaPredicted RBP11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 ZNF33AQ06730 810 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 BIRC3Q13489 604 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 NCOA4Q13772 614 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 NFIL3Q16649 462 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 SGSM1Q2NKQ1 1148 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 ZNF699Q32M78 642 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 C10orf76Q5T2E6 689 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 SDE2Q6IQ49 451 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 KLHDC10Q6PID8 442 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 FOXR2Q6PJQ5 311 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 LRSAM1Q6UWE0 723 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 ARMCX6Q7L4S7 300 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 UNC93AQ86WB7 457 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 SLC9A9Q8IVB4 645 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 HDDC3Q8N4P3 179 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 NAT16Q8N8M0 369 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 TAF4BQ92750 862 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 XPO6Q96QU8 1125 aaKnown RBP11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 MED15Q96RN5 788 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 NACA2Q9H009 215 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 TSPY26PQ9H489 355 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 SMYD3Q9H7B4 428 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 CAPN10Q9HC96 672 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 CD248Q9HCU0 757 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 CYLDQ9NQC7 956 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 TLR8Q9NR97 1041 aaKnown RBP11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 DMAC2Q9NW81 257 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 GMIPQ9P107 970 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 WDR35Q9P2L0 1181 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 HCN2Q9UL51 889 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 MSRB2Q9Y3D2 182 aa11.94□□□□□ -0.5
CCHCR1-220ENST00000506831 FAM221BA6H8Z2 402 aa11.93□□□□□ -0.5
CCHCR1-220ENST00000506831 GFRA2O00451 464 aa11.93□□□□□ -0.5
CCHCR1-220ENST00000506831 GREM1O60565 184 aa11.93□□□□□ -0.5
CCHCR1-220ENST00000506831 AP1G2O75843 785 aa11.93□□□□□ -0.5
CCHCR1-220ENST00000506831 HOXB2P14652 356 aa11.93□□□□□ -0.5
CCHCR1-220ENST00000506831 TRIM21P19474 475 aaKnown RBP11.93□□□□□ -0.5
CCHCR1-220ENST00000506831 SPINK2P20155 84 aa11.93□□□□□ -0.5
CCHCR1-220ENST00000506831 RPL13P26373 211 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms