RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 GPNMBQ14956 572 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 TCTN1Q2MV58 587 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 FAM26DQ5JW98 314 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 ZBED8Q8IZ13 594 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 SIX6OS1Q8N1H7 587 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 NRDE2Q9H7Z3 1164 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 SNX10Q9Y5X0 201 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 C9IYK1 514 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 APOL1O14791 398 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 MDM4O15151 490 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 LSP1P33241 339 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 LHX1P48742 406 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 PPP2R2AP63151 447 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 ROR1Q01973 937 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 IFRD2Q12894 506 aaPredicted RBP12.69□□□□□ -0.38
LIN54-206ENST00000506560 PDIA2Q13087 525 aaKnown RBP12.69□□□□□ -0.38
LIN54-206ENST00000506560 TUSC3Q13454 348 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 DPYSL2Q16555 572 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 SLC9A4Q6AI14 798 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 BHLHA9Q7RTU4 235 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 TTC13Q8NBP0 860 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 MYCBPAPQ8TBZ2 947 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 TEKT4Q8WW24 435 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 CSPG4P5Q96PW8 444 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 PRG3Q9Y2Y8 225 aaPredicted RBP12.69□□□□□ -0.38
LIN54-206ENST00000506560 FAM72CH0Y354 149 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 KCNN4O15554 427 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 AVILO75366 819 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 DAOAP59103 153 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 CAV1Q03135 178 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 EFHC1Q5JVL4 640 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 FAM72AQ5TYM5 149 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 FAM72DQ6L9T8 149 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 LEKR1Q6ZMV7 388 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 HOOK3Q86VS8 718 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 FAM72BQ86X60 149 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 NAT8LQ8N9F0 302 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 SCAMP5Q8TAC9 235 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 RSPH1Q8WYR4 309 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 B3GALT6Q96L58 329 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 NPY6RQ99463 290 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 FAM129AQ9BZQ8 928 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 FAM107BQ9H098 131 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 PPANQ9NQ55 473 aaKnown RBP12.68□□□□□ -0.38
LIN54-206ENST00000506560 HOXD10P28358 340 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 RPL9P32969 192 aaKnown RBP12.68□□□□□ -0.38
LIN54-206ENST00000506560 RAB27AP51159 221 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 GRIK3Q13003 919 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 EFTUD2Q15029 972 aaKnown RBP eCLIP12.68□□□□□ -0.38
LIN54-206ENST00000506560 PDK2Q15119 407 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 SLC25A52Q3SY17 297 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 EMC10Q5UCC4 262 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 IGDCC3Q8IVU1 814 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 TMEM86AQ8N2M4 240 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 AGGF1Q8N302 714 aaeCLIP12.68□□□□□ -0.38
LIN54-206ENST00000506560 SLC7A14Q8TBB6 771 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 CCDC110Q8TBZ0 833 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 KCTD13Q8WZ19 329 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 FAF2Q96CS3 445 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 PGM2Q96G03 612 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 SELENOSQ9BQE4 189 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 HMX1Q9NP08 348 aaPredicted RBP12.68□□□□□ -0.38
LIN54-206ENST00000506560 USP3Q9Y6I4 520 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 FRMPD3Q5JV73 1810 aa12.68□□□□□ -0.38
LIN54-206ENST00000506560 DAB1O75553 588 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 GCAP28676 217 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 MORF4L2Q15014 288 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 SDHAF4Q5VUM1 108 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 NCBP2-AS2Q69YL0 99 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 EXOC3L1Q86VI1 746 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 MAP7D3Q8IWC1 876 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 BBOF1Q8ND07 529 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 BCAS4Q8TDM0 211 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 PKMYT1Q99640 499 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 CEP41Q9BYV8 373 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 MLXIPLQ9NP71 852 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 CDH9Q9ULB4 789 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 FZD10Q9ULW2 581 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 CLUHO75153 1309 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 ANKRD65E5RJM6 399 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 CREB3O43889 395 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 NBNO60934 754 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 ODC1P11926 461 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 NCAM1P13591 858 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 SSTR1P30872 391 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 GRK4P32298 578 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 PBX3P40426 434 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 SLC8A3P57103 927 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 SNX16P57768 344 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 GPX6P59796 221 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 SF3A3Q12874 501 aaKnown RBP eCLIP12.67□□□□□ -0.38
LIN54-206ENST00000506560 TFDP2Q14188 446 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 TNFAIP8L3Q5GJ75 292 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 INTS6LQ5JSJ4 861 aaKnown RBP12.67□□□□□ -0.38
LIN54-206ENST00000506560 OVOS1Q6IE37 1185 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 PXYLP1Q8TE99 480 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 NT5C3BQ969T7 300 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 ZNF670Q9BS34 389 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 UBN1Q9NPG3 1134 aa12.67□□□□□ -0.38
LIN54-206ENST00000506560 CYLDQ9NQC7 956 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms