RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 FAM124BQ9H5Z6 455 aaPredicted RBP8.71□□□□□ -1.02
SNF8-204ENST00000506104 CCDC86Q9H6F5 360 aaKnown RBP8.71□□□□□ -1.02
SNF8-204ENST00000506104 CAPN10Q9HC96 672 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 WDR35Q9P2L0 1181 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 SUSD2Q9UGT4 822 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 NAGPAQ9UK23 515 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 APOBEC2Q9Y235 224 aaKnown RBP8.71□□□□□ -1.02
SNF8-204ENST00000506104 PLXNB3Q9ULL4 1909 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 CEP295Q9C0D2 2601 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 BAHCC1Q9P281 2608 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 CHD6Q8TD26 2715 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 TP53BP1Q12888 1972 aaPredicted RBP8.7□□□□□ -1.02
SNF8-204ENST00000506104 A0A0A0MRY4 1105 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 A0A1W2PQD8 194 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 A0A1W2PQF6 199 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 A0A1W2PQH9 124 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 PRRT4C9JH25 899 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 TGFB1I1O43294 461 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 FAM200BP0CF97 657 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 RARGP13631 454 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 CD58P19256 250 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 CD6P30203 668 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 HOXD12P35452 270 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 HOXD13P35453 343 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 PGFP49763 221 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 NDST1P52848 882 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 GRIK2Q13002 908 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 HNRNPDQ14103 355 aaKnown RBP8.7□□□□□ -1.02
SNF8-204ENST00000506104 COL28A1Q2UY09 1125 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 DCAF12L1Q5VU92 463 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 CEP135Q66GS9 1140 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 SMYD5Q6GMV2 418 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 SPOPLQ6IQ16 392 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 RSRC2Q7L4I2 434 aaKnown RBP8.7□□□□□ -1.02
SNF8-204ENST00000506104 GRAMD1CQ8IYS0 662 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 FUKQ8N0W3 1084 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 C12orf29Q8N999 325 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 SPDYE1Q8NFV5 336 aaPredicted RBP8.7□□□□□ -1.02
SNF8-204ENST00000506104 MDM1Q8TC05 714 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 ZNF507Q8TCN5 953 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 UCMAQ8WVF2 138 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 FOXJ1Q92949 421 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 ZNF396Q96N95 335 aaPredicted RBP8.7□□□□□ -1.02
SNF8-204ENST00000506104 SMOQ99835 787 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 KLF16Q9BXK1 252 aaPredicted RBP8.7□□□□□ -1.02
SNF8-204ENST00000506104 CIPCQ9C0C6 399 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 GAREM1Q9H706 876 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 HMGXB4Q9UGU5 601 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 STON1Q9Y6Q2 735 aa8.7□□□□□ -1.02
SNF8-204ENST00000506104 GOLGA4Q13439 2230 aaKnown RBP8.7□□□□□ -1.02
SNF8-204ENST00000506104 A0A1B0GTW7 788 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 LRRIQ3A6PVS8 624 aaPredicted RBP8.69□□□□□ -1.02
SNF8-204ENST00000506104 TAF4O00268 1085 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 POLR2DO15514 142 aaKnown RBP8.69□□□□□ -1.02
SNF8-204ENST00000506104 CACNG3O60359 315 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 CYBBP04839 570 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 EPHX1P07099 455 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 FAM163BP0C2L3 166 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 RALAP11233 206 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 MATKP42679 507 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 PLA2G4AP47712 749 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 TUBP50607 506 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 EFEMP1Q12805 493 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 SGSM1Q2NKQ1 1148 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 ZNF394Q53GI3 561 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 PAQR9Q6ZVX9 377 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 UNC13DQ70J99 1090 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 GPRIN1Q7Z2K8 1008 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 RAB44Q7Z6P3 723 aaPredicted RBP8.69□□□□□ -1.02
SNF8-204ENST00000506104 MARCH9Q86YJ5 346 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 CEP57L1Q8IYX8 460 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 KIAA1958Q8N8K9 716 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 ZMIZ2Q8NF64 920 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 RHBDD1Q8TEB9 315 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 GANCQ8TET4 914 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 DDI1Q8WTU0 396 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 SORCS1Q8WY21 1168 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 PRCCQ92733 491 aaPredicted RBP8.69□□□□□ -1.02
SNF8-204ENST00000506104 SIPA1Q96FS4 1042 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 LRIG1Q96JA1 1093 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 MRGPRX1Q96LB2 322 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 DCBLD2Q96PD2 775 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 IMPG2Q9BZV3 1241 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 IL21RQ9HBE5 538 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 EXOC1Q9NV70 894 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 COMMD8Q9NX08 183 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 FAM13BQ9NYF5 915 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 EIF2B4Q9UI10 523 aaKnown RBP8.69□□□□□ -1.02
SNF8-204ENST00000506104 DNMT3LQ9UJW3 386 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 HCN2Q9UL51 889 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 SHROOM3Q8TF72 1996 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 UBE4BO95155 1302 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 NUMA1Q14980 2115 aa8.69□□□□□ -1.02
SNF8-204ENST00000506104 A0A1B0GVT2 93 aa8.68□□□□□ -1.02
SNF8-204ENST00000506104 UPK3BL1B0FP48 263 aa8.68□□□□□ -1.02
SNF8-204ENST00000506104 UPK3BL2E5RIL1 263 aa8.68□□□□□ -1.02
SNF8-204ENST00000506104 BCAT2O15382 392 aaPredicted RBP8.68□□□□□ -1.02
SNF8-204ENST00000506104 STX6O43752 255 aa8.68□□□□□ -1.02
SNF8-204ENST00000506104 TSPAN3O60637 253 aa8.68□□□□□ -1.02
SNF8-204ENST00000506104 CUTAO60888 179 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms