RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 HERC6Q8IVU3 1022 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 VPS52Q8N1B4 723 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 PDZD8Q8NEN9 1154 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 ATL2Q8NHH9 583 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 ZNF461Q8TAF7 563 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 CCHCR1Q8TD31 782 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 NDRG1Q92597 394 aaKnown RBP12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 CLP1Q92989 425 aaKnown RBP12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 RNF34Q969K3 372 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 FBXO32Q969P5 355 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 NTAN1Q96AB6 310 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 CDK5RAP1Q96SZ6 601 aaKnown RBP12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 ZNF670Q9BS34 389 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 SNRNP25Q9BV90 132 aaKnown RBP12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 FAM129AQ9BZQ8 928 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 DCLK3Q9C098 648 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 TLR8Q9NR97 1041 aaKnown RBP12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 DDIT4Q9NX09 232 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 FNIP2Q9P278 1114 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 AMACRQ9UHK6 382 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 AP4E1Q9UPM8 1137 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 NAALADL1Q9UQQ1 740 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 COL4A6Q14031 1691 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 C3orf70A6NLC5 250 aaPredicted RBP12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 H3BRJ5 948 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 APOC4-APOC2K7ER74 178 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 C2CD2LO14523 706 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 CST8O60676 142 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 LPXNO60711 386 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 FGF18O76093 207 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 APOC2P02655 101 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 SLC2A3P11169 496 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 ALDH1A3P47895 512 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 CDR1P51861 262 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 SLC7A5Q01650 507 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 MTA1Q13330 715 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 PLD1Q13393 1074 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 RAB33AQ14088 237 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 PPP1R7Q15435 360 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 SIX1Q15475 284 aaPredicted RBP12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 TAF12Q16514 161 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 DPYSL2Q16555 572 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 DDR2Q16832 855 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 BRMS1LQ5PSV4 323 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 SYPL2Q5VXT5 272 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 TXNRD3NBQ6F5E7 133 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 FBXO38Q6PIJ6 1188 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 HFE2Q6ZVN8 426 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 BZW1Q7L1Q6 419 aaKnown RBP12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 BNIPLQ7Z465 357 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 FAM131BQ86XD5 332 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 SCAMP5Q8TAC9 235 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 OVCA2Q8WZ82 227 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 DPF3Q92784 378 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 SLCO2A1Q92959 643 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 SERPINB11Q96P15 392 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 PEBP4Q96S96 227 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 DHX35Q9H5Z1 703 aaKnown RBP12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 PCDH18Q9HCL0 1135 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 EPB41L5Q9HCM4 733 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 CLIC5Q9NZA1 410 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 IL37Q9NZH6 218 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 FZD10Q9ULW2 581 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 LZTS1Q9Y250 596 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 DRG1Q9Y295 367 aaKnown RBP12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 NR2E3Q9Y5X4 410 aa12.51□□□□□ -0.41
POLR2J3-211ENST00000506060 SYNJ2BP-COX16A0A087WUM0 186 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 TCRBV7S2A1N4TA0A589 114 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 FAM92AA1XBS5 289 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 WDR27A2RRH5 827 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 PRRG1O14668 218 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 APOL1O14791 398 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 MCF2LO15068 1137 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 TTI1O43156 1089 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 CSH1P0DML2 217 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 CSH2P0DML3 217 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 KRT10P13645 584 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 ATF2P15336 505 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 TGM2P21980 687 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 KPNA1P52294 538 aaPredicted RBP12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 RABGGTBP53611 331 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 EPHB4P54760 987 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 DRG2P55039 364 aaKnown RBP12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 VSNL1P62760 191 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 SCAPQ12770 1279 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 DUSP4Q13115 394 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 BYSLQ13895 437 aaKnown RBP12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 DPYSL3Q14195 570 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 PPP6R3Q5H9R7 873 aaPredicted RBP12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 ACBD5Q5T8D3 534 aaPredicted RBP12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 RSPO2Q6UXX9 243 aaPredicted RBP12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 CCNI2Q6ZMN8 369 aaPredicted RBP12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 PDZD4Q76G19 769 aaPredicted RBP12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 BHLHA9Q7RTU4 235 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 GSTA5Q7RTV2 222 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 TMCO2Q7Z6W1 182 aaPredicted RBP12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 JAMLQ86YT9 394 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 FAM71BQ8TC56 605 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 SP7Q8TDD2 431 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms