RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 P3H2Q8IVL5 708 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 FAM71BQ8TC56 605 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 TBC1D5Q92609 795 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 BBC3Q96PG8 261 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 CIPCQ9C0C6 399 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 PRDM13Q9H4Q3 707 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 FSCN3Q9NQT6 498 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 HELLSQ9NRZ9 838 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 SH3BP4Q9P0V3 963 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 CA14Q9ULX7 337 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 LRRC3CA6NJW4 275 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 TARM1B6A8C7 271 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 PCDH17O14917 1159 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 DHHO43323 396 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 TPD52L2O43399 206 aaKnown RBP4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 DNPH1O43598 174 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 TMPRSS11DO60235 418 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 TAF5LO75529 589 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 TCEA3O75764 348 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 C1QL1O75973 258 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 JTBO76095 146 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 GLP2RO95838 553 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 IGLV2-14P01704 120 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 CSTBP04080 98 aaKnown RBP4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 ANXA6P08133 673 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 NPPBP16860 134 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 ADRA1DP25100 572 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 KLRK1P26718 216 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 CHKAP35790 457 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 COPB1P53618 953 aaKnown RBP4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 HOXA4Q00056 320 aaPredicted RBP4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 BFSP2Q13515 415 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 KCNJ12Q14500 433 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 P3H1Q32P28 736 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 ERAP2Q6P179 960 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 TLDC1Q6P9B6 456 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 KIRREL2Q6UWL6 708 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 ZNF804AQ7Z570 1209 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 SFTPA1Q8IWL2 248 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 TERB1Q8NA31 727 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 FAM98AQ8NCA5 519 aaKnown RBP4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 NGDNQ8NEJ9 315 aaKnown RBP4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 REPS1Q96D71 796 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 NUDT22Q9BRQ3 303 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 PPCSQ9HAB8 311 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 USP29Q9HBJ7 922 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 SNX15Q9NRS6 342 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 TFCP2L1Q9NZI6 479 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 LRFN1Q9P244 771 aa4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 ARPP21Q9UBL0 812 aaPredicted RBP4.7□□□□□ -1.66
TOPBP1-204ENST00000505804 IFRD1O00458 451 aaPredicted RBP4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 TRIM38O00635 465 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 GYS1P13807 737 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 SERPINF1P36955 418 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 ALDH18A1P54886 795 aaKnown RBP4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 DNASE1L3Q13609 305 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 BLMHQ13867 455 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 GRAMD1BQ3KR37 738 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 DENND2CQ68D51 928 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 FBXO42Q6P3S6 717 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 PIK3AP1Q6ZUJ8 805 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 BCDIN3DQ7Z5W3 292 aaKnown RBP4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 TTC30AQ86WT1 665 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 GATAD2AQ86YP4 633 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 C12orf76Q8N812 135 aaPredicted RBP4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 PNPLA1Q8N8W4 532 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 BOLLQ8N9W6 283 aaKnown RBP4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 FAM71DQ8N9W8 422 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 OR1N1Q8NGS0 311 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 SARAFQ96BY9 339 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 MMS19Q96T76 1030 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 RMDN3Q96TC7 470 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 PSMD1Q99460 953 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 SAP30LQ9HAJ7 183 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 VPS45Q9NRW7 570 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 DACT1Q9NYF0 836 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 VPS4AQ9UN37 437 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 PCDHB2Q9Y5E7 798 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 WNT6Q9Y6F9 365 aa4.69□□□□□ -1.66
TOPBP1-204ENST00000505804 SYT5O00445 386 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 FCHO1O14526 889 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 PRAMEF2O60811 474 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 NBNO60934 754 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 ITGA5P08648 1049 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 NHLRC4P0CG21 123 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 ALADP13716 330 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 ZNF37AP17032 561 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 GSTM5P46439 218 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 RENBPP51606 427 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 DGKQP52824 942 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 GPC5P78333 572 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 SEMA3BQ13214 749 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 CSHL1Q14406 222 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 TRIM71Q2Q1W2 868 aaKnown RBP4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 FAM90A2PQ658T7 463 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 CCDC144NLQ6NUI1 221 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 RINT1Q6NUQ1 792 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 MSANTD2Q6P1R3 559 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 TRIM72Q6ZMU5 477 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms