RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 PGFP49763 221 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 CYP2J2P51589 502 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 MYL6P60660 151 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 ORC1Q13415 861 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 TRPC3Q13507 836 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 ALCAMQ13740 583 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 SURF1Q15526 300 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 HLA-BQ31612 363 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 FUT11Q495W5 492 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 DCAF12L1Q5VU92 463 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 LAYNQ6UX15 382 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 TMPRSS7Q7RTY8 843 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 GLRX5Q86SX6 157 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 WDR49Q8IV35 697 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 RHBDD1Q8TEB9 315 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 OVCA2Q8WZ82 227 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 HPS3Q969F9 1004 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 ELMO3Q96BJ8 720 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 KIF2CQ99661 725 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 GABRG3Q99928 467 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 TOR4AQ9NXH8 423 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 HSPBP1Q9NZL4 362 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 EIF2B4Q9UI10 523 aaKnown RBP7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 LSM7Q9UK45 103 aaKnown RBP7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 NUDT5Q9UKK9 219 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 SMC3Q9UQE7 1217 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 BTBD3Q9Y2F9 522 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 STARD13Q9Y3M8 1113 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 PCDHGA4Q9Y5G9 962 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 PTPRBP23467 1997 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 APC2O95996 2303 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 ACACAQ13085 2346 aa7.29□□□□□ -1.24
NPIPB3-203ENST00000504841 VPS37CA5D8V6 355 aaPredicted RBP7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 KCNK3O14649 394 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 KIAA0391O15091 583 aaKnown RBP7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 BCAT2O15382 392 aaPredicted RBP7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 FLRT2O43155 660 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 AP1G2O75843 785 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 NEFLP07196 543 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 IL12RB1P42701 662 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 TUBP50607 506 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 EMP3P54852 163 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 CDH8P55286 799 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 CLDN6P56747 220 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 IL9RQ01113 521 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 BNC1Q01954 994 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 CEBPZQ03701 1054 aaKnown RBP7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 GOLGA8FQ08AF8 430 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 GOLGA8DPQ0D2H9 430 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 C19orf57Q0VDD7 668 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 BIRC3Q13489 604 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 SNRNP35Q16560 246 aaKnown RBP7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 LARP1BQ659C4 914 aaKnown RBP7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 IL27RAQ6UWB1 636 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 DHRS13Q6UX07 377 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 STXBP4Q6ZWJ1 553 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 TMPRSS6Q8IU80 811 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 CCDC65Q8IXS2 484 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 GALNT15Q8N3T1 639 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 DNASE2BQ8WZ79 361 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 PRCCQ92733 491 aaPredicted RBP7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 MARVELD3Q96A59 401 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 SMARCD1Q96GM5 515 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 TMX3Q96JJ7 454 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 CLIC6Q96NY7 704 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 CGRRF1Q99675 332 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 CDC6Q99741 560 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 KLF16Q9BXK1 252 aaPredicted RBP7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 PANK2Q9BZ23 570 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 MKRN2Q9H000 416 aaKnown RBP7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 FAM49BQ9NUQ9 324 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 WSB2Q9NYS7 404 aaPredicted RBP7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 USP36Q9P275 1121 aaKnown RBP7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 WDR35Q9P2L0 1181 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 CLIC4Q9Y696 253 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 SLCO1B1Q9Y6L6 691 aa7.28□□□□□ -1.24
NPIPB3-203ENST00000504841 METTL12A8MUP2 240 aa7.27□□□□□ -1.25
NPIPB3-203ENST00000504841 KCNJ18B7U540 433 aa7.27□□□□□ -1.25
NPIPB3-203ENST00000504841 PLK4O00444 970 aa7.27□□□□□ -1.25
NPIPB3-203ENST00000504841 GFRA2O00451 464 aa7.27□□□□□ -1.25
NPIPB3-203ENST00000504841 CLIC2O15247 247 aa7.27□□□□□ -1.25
NPIPB3-203ENST00000504841 CYP26A1O43174 497 aa7.27□□□□□ -1.25
NPIPB3-203ENST00000504841 SYNCRIPO60506 623 aaKnown RBP7.27□□□□□ -1.25
NPIPB3-203ENST00000504841 BEST1O76090 585 aa7.27□□□□□ -1.25
NPIPB3-203ENST00000504841 CISD3P0C7P0 127 aa7.27□□□□□ -1.25
NPIPB3-203ENST00000504841 ACADMP11310 421 aa7.27□□□□□ -1.25
NPIPB3-203ENST00000504841 PRKCHP24723 683 aa7.27□□□□□ -1.25
NPIPB3-203ENST00000504841 ITPKBP27987 946 aa7.27□□□□□ -1.25
NPIPB3-203ENST00000504841 ADORA2BP29275 332 aa7.27□□□□□ -1.25
NPIPB3-203ENST00000504841 ATP5C1P36542 298 aaKnown RBP7.27□□□□□ -1.25
NPIPB3-203ENST00000504841 CSNK1EP49674 416 aaKnown RBP7.27□□□□□ -1.25
NPIPB3-203ENST00000504841 TPMTP51580 245 aa7.27□□□□□ -1.25
NPIPB3-203ENST00000504841 MAP3K7CLP57077 242 aa7.27□□□□□ -1.25
NPIPB3-203ENST00000504841 PSMD6Q15008 389 aa7.27□□□□□ -1.25
NPIPB3-203ENST00000504841 GEN1Q17RS7 908 aa7.27□□□□□ -1.25
NPIPB3-203ENST00000504841 KIF19Q2TAC6 998 aa7.27□□□□□ -1.25
NPIPB3-203ENST00000504841 ZNF699Q32M78 642 aa7.27□□□□□ -1.25
NPIPB3-203ENST00000504841 CCDC73Q6ZRK6 1079 aa7.27□□□□□ -1.25
NPIPB3-203ENST00000504841 PAQR9Q6ZVX9 377 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms