RNA–Protein interactions for RNA: ENST00000504606.1

TRIO-206, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-206ENST00000504606 ZNF840PA6NDX5 716 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 MIF4GDA9UHW6 222 aaKnown RBP11.84□□□□□ -0.51
TRIO-206ENST00000504606 DDX3YO15523 660 aaKnown RBP11.84□□□□□ -0.51
TRIO-206ENST00000504606 XYLBO75191 536 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 TADA3O75528 432 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 TRUB2O95900 331 aaKnown RBP11.84□□□□□ -0.51
TRIO-206ENST00000504606 F11P03951 625 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 MYL4P12829 197 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 TCF4P15884 667 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 PTPN2P17706 415 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 GABRR2P28476 465 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 MIPP30301 263 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 GBP1P32455 592 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 CTNNA1P35221 906 aaKnown RBP11.84□□□□□ -0.51
TRIO-206ENST00000504606 RDXP35241 583 aaKnown RBP11.84□□□□□ -0.51
TRIO-206ENST00000504606 PCK1P35558 622 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 PPP3CCP48454 512 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 MARCKSL1P49006 195 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 ATXN1P54253 815 aaKnown RBP11.84□□□□□ -0.51
TRIO-206ENST00000504606 HDAC4P56524 1084 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 NME3Q13232 169 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 GRIN2CQ14957 1233 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 MSANTD2Q6P1R3 559 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 TAC4Q86UU9 113 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 TMC8Q8IU68 726 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 UBL4BQ8N7F7 174 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 VN1R2Q8NFZ6 395 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 UBE2Q2Q8WVN8 375 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 CENPIQ92674 756 aaPredicted RBP11.84□□□□□ -0.51
TRIO-206ENST00000504606 KRT35Q92764 455 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 CD101Q93033 1021 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 NT5C3BQ969T7 300 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 HES6Q96HZ4 224 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 GCNAQ96QF7 691 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 PSMB7Q99436 277 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 LRRC3Q9BY71 257 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 ADAM33Q9BZ11 813 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 SMOC2Q9H3U7 446 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 ZWILCHQ9H900 591 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 IL21Q9HBE4 155 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 RRAGDQ9NQL2 400 aaPredicted RBP11.84□□□□□ -0.51
TRIO-206ENST00000504606 ASAH2Q9NR71 780 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 OLA1Q9NTK5 396 aaKnown RBP11.84□□□□□ -0.51
TRIO-206ENST00000504606 DDIT4Q9NX09 232 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 CALCOCO1Q9P1Z2 691 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 PCSK1NQ9UHG2 260 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 SFMBT1Q9UHJ3 866 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 RASAL2Q9UJF2 1139 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 USP18Q9UMW8 372 aa11.84□□□□□ -0.51
TRIO-206ENST00000504606 MYO7AQ13402 2215 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 CCDC195A0A1B0GUA6 201 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 SOX1O00570 391 aaPredicted RBP11.83□□□□□ -0.52
TRIO-206ENST00000504606 MDM4O15151 490 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 IRAK2O43187 625 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 PSTPIP1O43586 416 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 PRPSAP2O60256 369 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 TLR5O60602 858 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 ENDOD1O94919 500 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 SLC25A11Q02978 314 aaKnown RBP11.83□□□□□ -0.52
TRIO-206ENST00000504606 HYAL1Q12794 435 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 EFEMP1Q12805 493 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 KCNC3Q14003 757 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 PABPC1LQ4VXU2 614 aaKnown RBP11.83□□□□□ -0.52
TRIO-206ENST00000504606 C10orf120Q5SQS8 335 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 HECTD3Q5T447 861 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 ZFYVE27Q5T4F4 411 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 SNX30Q5VWJ9 437 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 PAPD7Q5XG87 772 aaKnown RBP11.83□□□□□ -0.52
TRIO-206ENST00000504606 SND1Q7KZF4 910 aaKnown RBP eCLIP11.83□□□□□ -0.52
TRIO-206ENST00000504606 BNIPLQ7Z465 357 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 TMEM150AQ86TG1 271 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 TADA2BQ86TJ2 420 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 FAM131BQ86XD5 332 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 PGAP3Q96FM1 320 aaPredicted RBP11.83□□□□□ -0.52
TRIO-206ENST00000504606 SERPINB11Q96P15 392 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 PEBP4Q96S96 227 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 CDK5RAP1Q96SZ6 601 aaKnown RBP11.83□□□□□ -0.52
TRIO-206ENST00000504606 PRKD2Q9BZL6 878 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 NACA2Q9H009 215 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 ATXN3LQ9H3M9 355 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 CCSER2Q9H7U1 834 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 SFXN1Q9H9B4 322 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 PIDD1Q9HB75 910 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 DZANK1Q9NVP4 752 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 HCFC1R1Q9NWW0 138 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.83□□□□□ -0.52
TRIO-206ENST00000504606 LMCD1Q9NZU5 365 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 DNMT3BQ9UBC3 853 aaKnown RBP11.83□□□□□ -0.52
TRIO-206ENST00000504606 SNX12Q9UMY4 172 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.83□□□□□ -0.52
TRIO-206ENST00000504606 PCDHA3Q9Y5H8 950 aa11.83□□□□□ -0.52
TRIO-206ENST00000504606 A0A1W2PRU2 124 aa11.82□□□□□ -0.52
TRIO-206ENST00000504606 KCNK3O14649 394 aa11.82□□□□□ -0.52
TRIO-206ENST00000504606 LINC01565O15544 149 aa11.82□□□□□ -0.52
TRIO-206ENST00000504606 MSI1O43347 362 aaKnown RBP11.82□□□□□ -0.52
TRIO-206ENST00000504606 URI1O94763 535 aaPredicted RBP11.82□□□□□ -0.52
TRIO-206ENST00000504606 TBX18O95935 607 aa11.82□□□□□ -0.52
TRIO-206ENST00000504606 F9P00740 461 aa11.82□□□□□ -0.52
TRIO-206ENST00000504606 IGLV3-25P01717 112 aa11.82□□□□□ -0.52
TRIO-206ENST00000504606 KRT7P08729 469 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms