RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 DUSP15Q9H1R2 295 aaPredicted RBP23.18■■□□□ 1.3
LSM6-203ENST00000503982 METTL14Q9HCE5 456 aaKnown RBP23.18■■□□□ 1.3
LSM6-203ENST00000503982 MAN1B1Q9UKM7 699 aa23.18■■□□□ 1.3
LSM6-203ENST00000503982 SGK1O00141 431 aa23.17■■□□□ 1.3
LSM6-203ENST00000503982 TYRP14679 529 aa23.17■■□□□ 1.3
LSM6-203ENST00000503982 MPLP40238 635 aa23.17■■□□□ 1.3
LSM6-203ENST00000503982 HSF5Q4G112 596 aaPredicted RBP23.17■■□□□ 1.3
LSM6-203ENST00000503982 SGO2Q562F6 1265 aa23.17■■□□□ 1.3
LSM6-203ENST00000503982 IL31Q6EBC2 164 aa23.17■■□□□ 1.3
LSM6-203ENST00000503982 TMEM92Q6UXU6 159 aa23.17■■□□□ 1.3
LSM6-203ENST00000503982 TRMT11Q7Z4G4 463 aaKnown RBP23.17■■□□□ 1.3
LSM6-203ENST00000503982 ARHGAP18Q8N392 663 aa23.17■■□□□ 1.3
LSM6-203ENST00000503982 ZNF513Q8N8E2 541 aaPredicted RBP23.17■■□□□ 1.3
LSM6-203ENST00000503982 MDGA1Q8NFP4 955 aa23.17■■□□□ 1.3
LSM6-203ENST00000503982 SPATA20Q8TB22 786 aa23.17■■□□□ 1.3
LSM6-203ENST00000503982 HMGB4Q8WW32 186 aa23.17■■□□□ 1.3
LSM6-203ENST00000503982 ZC3H10Q96K80 434 aaKnown RBP23.17■■□□□ 1.3
LSM6-203ENST00000503982 CNOT6LQ96LI5 555 aaKnown RBP23.17■■□□□ 1.3
LSM6-203ENST00000503982 SMOC1Q9H4F8 434 aa23.17■■□□□ 1.3
LSM6-203ENST00000503982 WDR35Q9P2L0 1181 aa23.17■■□□□ 1.3
LSM6-203ENST00000503982 STRIP2Q9ULQ0 834 aa23.17■■□□□ 1.3
LSM6-203ENST00000503982 CTNND2Q9UQB3 1225 aa23.17■■□□□ 1.3
LSM6-203ENST00000503982 PCDHGA5Q9Y5G8 931 aa23.17■■□□□ 1.3
LSM6-203ENST00000503982 NUP205Q92621 2012 aa23.16■■□□□ 1.3
LSM6-203ENST00000503982 BIN1O00499 593 aa23.16■■□□□ 1.3
LSM6-203ENST00000503982 MAP3K13O43283 966 aa23.16■■□□□ 1.3
LSM6-203ENST00000503982 TBXAS1P24557 533 aaPredicted RBP23.16■■□□□ 1.3
LSM6-203ENST00000503982 WASP42768 502 aa23.16■■□□□ 1.3
LSM6-203ENST00000503982 CETN1Q12798 172 aa23.16■■□□□ 1.3
LSM6-203ENST00000503982 ARHGAP17Q68EM7 881 aa23.16■■□□□ 1.3
LSM6-203ENST00000503982 SCD5Q86SK9 330 aa23.16■■□□□ 1.3
LSM6-203ENST00000503982 PIGZQ86VD9 579 aa23.16■■□□□ 1.3
LSM6-203ENST00000503982 C11orf74Q86VG3 221 aa23.16■■□□□ 1.3
LSM6-203ENST00000503982 ETFBKMTQ8IXQ9 262 aa23.16■■□□□ 1.3
LSM6-203ENST00000503982 ZC3H3Q8IXZ2 948 aaKnown RBP23.16■■□□□ 1.3
LSM6-203ENST00000503982 ABCA7Q8IZY2 2146 aa23.16■■□□□ 1.3
LSM6-203ENST00000503982 TERB1Q8NA31 727 aa23.16■■□□□ 1.3
LSM6-203ENST00000503982 ANKRD52Q8NB46 1076 aa23.16■■□□□ 1.3
LSM6-203ENST00000503982 CEP63Q96MT8 703 aa23.16■■□□□ 1.3
LSM6-203ENST00000503982 FAM124BQ9H5Z6 455 aaPredicted RBP23.16■■□□□ 1.3
LSM6-203ENST00000503982 LRRC4Q9HBW1 653 aa23.16■■□□□ 1.3
LSM6-203ENST00000503982 TSPAN16Q9UKR8 245 aa23.16■■□□□ 1.3
LSM6-203ENST00000503982 TCRBV21S2A2A0A5A6 115 aa23.15■■□□□ 1.3
LSM6-203ENST00000503982 SLC30A4O14863 429 aa23.15■■□□□ 1.3
LSM6-203ENST00000503982 TRIM24O15164 1050 aa23.15■■□□□ 1.3
LSM6-203ENST00000503982 ZBTB24O43167 697 aaPredicted RBP23.15■■□□□ 1.3
LSM6-203ENST00000503982 ZNF806P0C7X5 589 aa23.15■■□□□ 1.3
LSM6-203ENST00000503982 KIR2DL1P43626 348 aaPredicted RBP23.15■■□□□ 1.3
LSM6-203ENST00000503982 FMO5P49326 533 aa23.15■■□□□ 1.3
LSM6-203ENST00000503982 TKTL1P51854 596 aa23.15■■□□□ 1.3
LSM6-203ENST00000503982 YWHAGP61981 247 aaKnown RBP eCLIP23.15■■□□□ 1.3
LSM6-203ENST00000503982 SDE2Q6IQ49 451 aa23.15■■□□□ 1.3
LSM6-203ENST00000503982 KLHDC10Q6PID8 442 aa23.15■■□□□ 1.3
LSM6-203ENST00000503982 NELFBQ8WX92 580 aa23.15■■□□□ 1.3
LSM6-203ENST00000503982 SLC35C1Q96A29 364 aa23.15■■□□□ 1.3
LSM6-203ENST00000503982 SPACA7Q96KW9 195 aa23.15■■□□□ 1.3
LSM6-203ENST00000503982 DUSP9Q99956 384 aaKnown RBP23.15■■□□□ 1.3
LSM6-203ENST00000503982 VPS45Q9NRW7 570 aa23.15■■□□□ 1.3
LSM6-203ENST00000503982 CLIC5Q9NZA1 410 aa23.15■■□□□ 1.3
LSM6-203ENST00000503982 COQ4Q9Y3A0 265 aa23.15■■□□□ 1.3
LSM6-203ENST00000503982 USP3Q9Y6I4 520 aa23.15■■□□□ 1.3
LSM6-203ENST00000503982 BICDL2A1A5D9 508 aa23.14■■□□□ 1.29
LSM6-203ENST00000503982 GADD45BO75293 160 aaPredicted RBP23.14■■□□□ 1.29
LSM6-203ENST00000503982 CD44P16070 742 aaKnown RBP23.14■■□□□ 1.29
LSM6-203ENST00000503982 DHPSP49366 369 aaPredicted RBP23.14■■□□□ 1.29
LSM6-203ENST00000503982 DGKGP49619 791 aa23.14■■□□□ 1.29
LSM6-203ENST00000503982 BCAT1P54687 386 aa23.14■■□□□ 1.29
LSM6-203ENST00000503982 MCCD1P59942 119 aaPredicted RBP23.14■■□□□ 1.29
LSM6-203ENST00000503982 COG7P83436 770 aa23.14■■□□□ 1.29
LSM6-203ENST00000503982 RASSF3Q86WH2 238 aa23.14■■□□□ 1.29
LSM6-203ENST00000503982 PHTF2Q8N3S3 785 aa23.14■■□□□ 1.29
LSM6-203ENST00000503982 UBA3Q8TBC4 463 aa23.14■■□□□ 1.29
LSM6-203ENST00000503982 RLN3Q8WXF3 142 aa23.14■■□□□ 1.29
LSM6-203ENST00000503982 NT5C1BQ96P26 610 aa23.14■■□□□ 1.29
LSM6-203ENST00000503982 ULBP1Q9BZM6 244 aa23.14■■□□□ 1.29
LSM6-203ENST00000503982 UBXN6Q9BZV1 441 aa23.14■■□□□ 1.29
LSM6-203ENST00000503982 PLK2Q9NYY3 685 aa23.14■■□□□ 1.29
LSM6-203ENST00000503982 ZNF510Q9Y2H8 683 aa23.14■■□□□ 1.29
LSM6-203ENST00000503982 PCDHB4Q9Y5E5 795 aa23.14■■□□□ 1.29
LSM6-203ENST00000503982 CACNA1AO00555 2505 aa23.14■■□□□ 1.29
LSM6-203ENST00000503982 A0A0A0MRY4 1105 aa23.13■■□□□ 1.29
LSM6-203ENST00000503982 SLC12A8A0AV02 714 aa23.13■■□□□ 1.29
LSM6-203ENST00000503982 STC2O76061 302 aa23.13■■□□□ 1.29
LSM6-203ENST00000503982 HOXB2P14652 356 aa23.13■■□□□ 1.29
LSM6-203ENST00000503982 HNRNPLP14866 589 aaKnown RBP eCLIP23.13■■□□□ 1.29
LSM6-203ENST00000503982 CORO1AP31146 461 aaKnown RBP23.13■■□□□ 1.29
LSM6-203ENST00000503982 STX17P56962 302 aa23.13■■□□□ 1.29
LSM6-203ENST00000503982 PDE4CQ08493 712 aa23.13■■□□□ 1.29
LSM6-203ENST00000503982 BST2Q10589 180 aaKnown RBP23.13■■□□□ 1.29
LSM6-203ENST00000503982 TMEM270Q6UE05 265 aa23.13■■□□□ 1.29
LSM6-203ENST00000503982 SIX6OS1Q8N1H7 587 aa23.13■■□□□ 1.29
LSM6-203ENST00000503982 PPM1KQ8N3J5 372 aa23.13■■□□□ 1.29
LSM6-203ENST00000503982 ERLEC1Q96DZ1 483 aa23.13■■□□□ 1.29
LSM6-203ENST00000503982 DCLK3Q9C098 648 aa23.13■■□□□ 1.29
LSM6-203ENST00000503982 XPO1O14980 1071 aaKnown RBP23.12■■□□□ 1.29
LSM6-203ENST00000503982 GREM1O60565 184 aa23.12■■□□□ 1.29
LSM6-203ENST00000503982 CAVIN2O95810 425 aa23.12■■□□□ 1.29
LSM6-203ENST00000503982 ZBED1O96006 694 aa23.12■■□□□ 1.29
LSM6-203ENST00000503982 VDRP11473 427 aa23.12■■□□□ 1.29
LSM6-203ENST00000503982 BCKDHBP21953 392 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms