RNA–Protein interactions for RNA: ENST00000502991.5

RFC1-205, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-205ENST00000502991 SLAMF7Q9NQ25 335 aa5.16□□□□□ -1.58
RFC1-205ENST00000502991 HAUS2Q9NVX0 235 aa5.16□□□□□ -1.58
RFC1-205ENST00000502991 RGS17Q9UGC6 210 aaPredicted RBP5.16□□□□□ -1.58
RFC1-205ENST00000502991 ZNHIT2Q9UHR6 403 aa5.16□□□□□ -1.58
RFC1-205ENST00000502991 MED16Q9Y2X0 877 aa5.16□□□□□ -1.58
RFC1-205ENST00000502991 POLR2AP24928 1970 aaKnown RBP5.15□□□□□ -1.58
RFC1-205ENST00000502991 BTN3A1O00481 513 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 TBC1D4O60343 1298 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 STARD3NLO95772 234 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 TK1P04183 234 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 IL1R1P14778 569 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 TGM1P22735 817 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 PRDX5P30044 214 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 HOXC13P31276 330 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 VAV2P52735 878 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 PNLIPRP1P54315 467 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 PRKAA2P54646 552 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 SOX8P57073 446 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 ACTR2P61160 394 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 ARF3P61204 181 aaPredicted RBP5.15□□□□□ -1.59
RFC1-205ENST00000502991 PSMC1P62191 440 aaKnown RBP5.15□□□□□ -1.59
RFC1-205ENST00000502991 ARF1P84077 181 aaKnown RBP5.15□□□□□ -1.59
RFC1-205ENST00000502991 TAP1Q03518 808 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 SLC13A2Q13183 592 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 SLC12A1Q13621 1099 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 CD300EQ496F6 205 aaPredicted RBP5.15□□□□□ -1.59
RFC1-205ENST00000502991 SLC44A4Q53GD3 710 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 SLC9C2Q5TAH2 1124 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 RRAGBQ5VZM2 374 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 ARMC6Q6NXE6 501 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 BBS12Q6ZW61 710 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 ZNF365Q70YC5 407 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 FAM90A1Q86YD7 464 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 ZNF713Q8N859 430 aaPredicted RBP5.15□□□□□ -1.59
RFC1-205ENST00000502991 PDPRQ8NCN5 879 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 CCDC191Q8NCU4 936 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 CCDC150Q8NCX0 1101 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 AFAP1L1Q8TED9 768 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 CREB3L4Q8TEY5 395 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 ATRIPQ8WXE1 791 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 SDCCAG3Q96C92 435 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 VMP1Q96GC9 406 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 TWNKQ96RR1 684 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 PRPF18Q99633 342 aaKnown RBP5.15□□□□□ -1.59
RFC1-205ENST00000502991 SLF1Q9BQI6 1058 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 AIFM2Q9BRQ8 373 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 C1orf43Q9BWL3 253 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 TXLNGYQ9BZA5 131 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 GPR63Q9BZJ6 419 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 ZNF518BQ9C0D4 1074 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 ARHGAP39Q9C0H5 1083 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 PABPC3Q9H361 631 aaKnown RBP5.15□□□□□ -1.59
RFC1-205ENST00000502991 PRDM13Q9H4Q3 707 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 TMEM74BQ9NUR3 256 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 TBCCD1Q9NVR7 557 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 MRPS18AQ9NVS2 196 aaKnown RBP5.15□□□□□ -1.59
RFC1-205ENST00000502991 JKAMPQ9P055 326 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 ZNF112Q9UJU3 913 aa5.15□□□□□ -1.59
RFC1-205ENST00000502991 ISY1Q9ULR0 285 aaKnown RBP5.15□□□□□ -1.59
RFC1-205ENST00000502991 E9PLN8 166 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 H7C0S8 307 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 MGST3O14880 152 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 ACTL6BO94805 426 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 ESRRBO95718 433 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 HNRNPA1P09651 372 aaKnown RBP eCLIP5.14□□□□□ -1.59
RFC1-205ENST00000502991 CXCR5P32302 372 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 ACTN2P35609 894 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 PLIN5Q00G26 463 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 CDC16Q13042 620 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 MPP3Q13368 585 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 SF3B3Q15393 1217 aaKnown RBP5.14□□□□□ -1.59
RFC1-205ENST00000502991 Q6ZNX1 250 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 CCDC117Q8IWD4 279 aaPredicted RBP5.14□□□□□ -1.59
RFC1-205ENST00000502991 CFAP52Q8N1V2 620 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 NGEFQ8N5V2 710 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 IPCEF1Q8WWN9 437 aaPredicted RBP5.14□□□□□ -1.59
RFC1-205ENST00000502991 ATP2A3Q93084 1043 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 NSUN4Q96CB9 384 aaKnown RBP5.14□□□□□ -1.59
RFC1-205ENST00000502991 SNX27Q96L92 541 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 COQ10AQ96MF6 247 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 CRAMP1Q96RY5 1269 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 VKORC1Q9BQB6 163 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 TWSG1Q9GZX9 223 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 RIOX1Q9H6W3 641 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 PRDM8Q9NQV8 689 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 CTTNBP2NLQ9P2B4 639 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 ZNF212Q9UDV6 495 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 MAST3O60307 1309 aa5.14□□□□□ -1.59
RFC1-205ENST00000502991 RSF1Q96T23 1441 aaPredicted RBP5.14□□□□□ -1.59
RFC1-205ENST00000502991 TRGV11A0A075B6L2 103 aa5.13□□□□□ -1.59
RFC1-205ENST00000502991 MYADML2A6NDP7 307 aa5.13□□□□□ -1.59
RFC1-205ENST00000502991 MBD3L4A6NDZ8 208 aaPredicted RBP5.13□□□□□ -1.59
RFC1-205ENST00000502991 MBD3L3A6NE82 208 aaPredicted RBP5.13□□□□□ -1.59
RFC1-205ENST00000502991 PRSS29PA6NIE9 313 aa5.13□□□□□ -1.59
RFC1-205ENST00000502991 ZNF785A8K8V0 405 aa5.13□□□□□ -1.59
RFC1-205ENST00000502991 PYCARD-AS1I3L0S3 204 aa5.13□□□□□ -1.59
RFC1-205ENST00000502991 FCHO1O14526 889 aa5.13□□□□□ -1.59
RFC1-205ENST00000502991 KCNQ3O43525 872 aa5.13□□□□□ -1.59
RFC1-205ENST00000502991 PTP4A3O75365 173 aa5.13□□□□□ -1.59
RFC1-205ENST00000502991 SUN1O94901 812 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms