RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 XYLT2Q9H1B5 865 aa11.78□□□□□ -0.52
UBE2D3-211ENST00000502404 SLC32A1Q9H598 525 aa11.78□□□□□ -0.52
UBE2D3-211ENST00000502404 SLC39A2Q9NP94 309 aa11.78□□□□□ -0.52
UBE2D3-211ENST00000502404 TLR8Q9NR97 1041 aaKnown RBP11.78□□□□□ -0.52
UBE2D3-211ENST00000502404 MAP1BP46821 2468 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 TTC24A2A3L6 582 aaPredicted RBP11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 SGK1O00141 431 aa11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 HOXC11O43248 304 aaPredicted RBP11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 AP5Z1O43299 807 aa11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 KIF20AO95235 890 aa11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 RDXP35241 583 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 KIR2DL1P43626 348 aaPredicted RBP11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 AFMP43652 599 aa11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 SLC5A3P53794 718 aa11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 ATXN3P54252 364 aaPredicted RBP11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 CLDN10P78369 228 aa11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 EHHADHQ08426 723 aa11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 ANO4Q32M45 955 aa11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 SH3PXD2AQ5TCZ1 1133 aa11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 UNC93AQ86WB7 457 aa11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 SLC9A9Q8IVB4 645 aa11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 PARD3BQ8TEW8 1205 aa11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 HMGB4Q8WW32 186 aa11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 XPO6Q96QU8 1125 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 KCNK16Q96T55 309 aa11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 BLZF1Q9H2G9 400 aa11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.77□□□□□ -0.536e-7■■■■■ 62.1
UBE2D3-211ENST00000502404 SPHK2Q9NRA0 654 aa11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 EXOC1Q9NV70 894 aa11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 IL37Q9NZH6 218 aa11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 WDR35Q9P2L0 1181 aa11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 LSM7Q9UK45 103 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 FRMD4BQ9Y2L6 1034 aa11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 ANAPC1Q9H1A4 1944 aa11.77□□□□□ -0.53
UBE2D3-211ENST00000502404 KMT2BQ9UMN6 2715 aaPredicted RBP11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 TCRBV21S2A2A0A5A6 115 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 FAM92AA1XBS5 289 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 J3QL48 77 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 SCAMP3O14828 347 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 IKBKBO14920 756 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 ZNF217O75362 1048 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 TULP3O75386 442 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 PROS1P07225 676 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 BCKDHBP21953 392 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 NTSR1P30989 418 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 ATP5C1P36542 298 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 CACNA2D1P54289 1103 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 CDH8P55286 799 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 IRX4P78413 519 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 KDSRQ06136 332 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 ZNF252P-AS1Q0IIN9 211 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 E2F5Q15329 346 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 UAP1L1Q3KQV9 507 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 TRIM61Q5EBN2 209 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 LYSMD4Q5XG99 296 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 GRAMD4Q6IC98 578 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 TADA2BQ86TJ2 420 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 ACOT1Q86TX2 421 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 CRYBG2Q8N1P7 616 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 ZNF513Q8N8E2 541 aaPredicted RBP11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 NAT16Q8N8M0 369 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 SCAMP5Q8TAC9 235 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 TMEM174Q8WUU8 243 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 CCDC47Q96A33 483 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 IMPG2Q9BZV3 1241 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 SMYD3Q9H7B4 428 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 USP25Q9UHP3 1055 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 NME7Q9Y5B8 376 aa11.76□□□□□ -0.53
UBE2D3-211ENST00000502404 ABCA7Q8IZY2 2146 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 LRRIQ3A6PVS8 624 aaPredicted RBP11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 PDXKO00764 312 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 TLR5O60602 858 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 C4BPAP04003 597 aaKnown RBP11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 MYL1P05976 194 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 SLFN14P0C7P3 912 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 ZDHHC11BP0C7U3 371 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 FAM200BP0CF97 657 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 ZSCAN22P10073 491 aaPredicted RBP11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 DUOXA1Q1HG43 343 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 C10orf76Q5T2E6 689 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 EMC10Q5UCC4 262 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 RESP18Q5W5W9 173 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 SCARA5Q6ZMJ2 495 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 HTR3DQ70Z44 454 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 TMEM25Q86YD3 366 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 ETFBKMTQ8IXQ9 262 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 TMEFF1Q8IYR6 380 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 HDDC3Q8N4P3 179 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 TERB1Q8NA31 727 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 CCDC150Q8NCX0 1101 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 RLN3Q8WXF3 142 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 CCSER2Q9H7U1 834 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 KRT82Q9NSB4 513 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 TMEM30AQ9NV96 361 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 DMAC2Q9NW81 257 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 GMIPQ9P107 970 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 PCDHA7Q9UN72 937 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 STARD13Q9Y3M8 1113 aa11.75□□□□□ -0.53
UBE2D3-211ENST00000502404 THADAQ6YHU6 1953 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms