RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	CCDC66	A2RUB6	948 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	TNRC18	O15417	2968 aa	Predicted RBP	12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	LPXN	O60711	386 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	CLASP2	O75122	1294 aa	Known RBP	12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	PAPLN	O95428	1278 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	GLUD1	P00367	558 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	CSH1	P0DML2	217 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	CSH2	P0DML3	217 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	TCP1	P17987	556 aa	Known RBP	12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	KLRC2	P26717	231 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	IL1R2	P27930	398 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	MIP	P30301	263 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	ELF1	P32519	619 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	YWHAG	P61981	247 aa	Known RBP eCLIP	12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	TWF1	Q12792	350 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	TUBB2A	Q13885	445 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	DNTTIP2	Q5QJE6	756 aa	Known RBP	12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	SNX30	Q5VWJ9	437 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	TXNRD3NB	Q6F5E7	133 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	MSANTD2	Q6P1R3	559 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	POLN	Q7Z5Q5	900 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	ZNF276	Q8N554	614 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	KREMEN2	Q8NCW0	462 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	GIPC2	Q8TF65	315 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	OVCA2	Q8WZ82	227 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	PEBP4	Q96S96	227 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	TBCB	Q99426	244 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	NCAPG	Q9BPX3	1015 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	TUBB2B	Q9BVA1	445 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	TRIM62	Q9BVG3	475 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	CARD9	Q9H257	536 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	ABCC13	Q9NSE7	274 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	CLIC5	Q9NZA1	410 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	GMIP	Q9P107	970 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	CDC23	Q9UJX2	597 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	SAR1B	Q9Y6B6	198 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	MYO7A	Q13402	2215 aa		12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	ZNF638	Q14966	1978 aa	Known RBP	12.69	□□□□□ -0.38
MATR3-231	ENST00000502394	MYO16	Q9Y6X6	1858 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	PRRG1	O14668	218 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	TADA3	O75528	432 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	URI1	O94763	535 aa	Predicted RBP	12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	TRUB2	O95900	331 aa	Known RBP	12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	ALDH1A3	P47895	512 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	TAF10	Q12962	218 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	PLD1	Q13393	1074 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	DCAF6	Q58WW2	860 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	CCDC149	Q6ZUS6	474 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	ADGRD2	Q7Z7M1	963 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	CREG2	Q8IUH2	290 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	RHOT1	Q8IXI2	618 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	KATNAL2	Q8IYT4	538 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	ARHGAP18	Q8N392	663 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	RASGEF1C	Q8N431	466 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	SLC7A14	Q8TBB6	771 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	DQX1	Q8TE96	717 aa	Known RBP	12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	GDPD5	Q8WTR4	605 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	COG1	Q8WTW3	980 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	FAM172A	Q8WUF8	416 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	HDAC7	Q8WUI4	952 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	ARNTL2	Q8WYA1	636 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	FBXO32	Q969P5	355 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	PSMG2	Q969U7	264 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	TIFA	Q96CG3	184 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	PBK	Q96KB5	322 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	LRRC3	Q9BY71	257 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	CERS4	Q9HA82	394 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	SLC28A3	Q9HAS3	691 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	WDR6	Q9NNW5	1121 aa	Known RBP	12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	NPDC1	Q9NQX5	325 aa	Predicted RBP	12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	STAP1	Q9ULZ2	295 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	UST	Q9Y2C2	406 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	ASB3	Q9Y575	518 aa		12.68	□□□□□ -0.38
MATR3-231	ENST00000502394	LAMA3	Q16787	3333 aa		12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	MTCL1	Q9Y4B5	1905 aa	Known RBP	12.67	□□□□□ -0.38
MATR3-231	ENST00000502394		A0A1W2PPC1	479 aa		12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	KCNK3	O14649	394 aa		12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	SRGAP2	O75044	1071 aa		12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	RNF8	O76064	485 aa		12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	C8A	P07357	584 aa		12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	POU2F2	P09086	479 aa		12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	SPATA31D3	P0C874	917 aa		12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	NCAM1	P13591	858 aa		12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	HOXA9	P31269	272 aa		12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	CA8	P35219	290 aa		12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	SULT1E1	P49888	294 aa		12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	ARSE	P51690	589 aa		12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	ATXN1	P54253	815 aa	Known RBP	12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	RWDD2B	P57060	319 aa		12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	ATP11A	P98196	1134 aa		12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	IFRD2	Q12894	506 aa	Predicted RBP	12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	KCNC3	Q14003	757 aa		12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	SPATA31D4	Q6ZUB0	917 aa		12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	TAC4	Q86UU9	113 aa		12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	TMC8	Q8IU68	726 aa		12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	UBL4B	Q8N7F7	174 aa		12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	PDZD8	Q8NEN9	1154 aa		12.67	□□□□□ -0.38
MATR3-231	ENST00000502394	MICAL1	Q8TDZ2	1067 aa		12.67	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms