RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 PYCARD-AS1I3L0S3 204 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 FMO6PO60774 539 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 CYP7B1O75881 506 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 GUCA1CO95843 209 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 AFPP02771 609 aaKnown RBP4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 CNPP09543 421 aaKnown RBP4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 LAMP2P13473 410 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 ALADP13716 330 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 TLX1P31314 330 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 EIF2DP41214 584 aaKnown RBP4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 SLC6A9P48067 706 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 GLRBP48167 497 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 RPS3AP61247 264 aaKnown RBP4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 RBP5P82980 135 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 AIMP1Q12904 312 aaKnown RBP4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 DCTN2Q13561 401 aaKnown RBP4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 TRIM29Q14134 588 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 GPR68Q15743 365 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 ZNF674Q2M3X9 581 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 ARL6IP4Q66PJ3 421 aaKnown RBP4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 ZNF772Q68DY9 489 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 MCTP2Q6DN12 878 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 IYDQ6PHW0 289 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 CRTC1Q6UUV9 634 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 GADL1Q6ZQY3 521 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 IKBIPQ70UQ0 350 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 ZNF804AQ7Z570 1209 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 GPR149Q86SP6 731 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 RSPH3Q86UC2 560 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 SLC9B2Q86UD5 537 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 WFDC3Q8IUB2 231 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 UNC45BQ8IWX7 931 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 ADSSL1Q8N142 457 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 SCML4Q8N228 414 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 TMCO5AQ8N6Q1 288 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 ZBTB8BQ8NAP8 495 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 CHST13Q8NET6 341 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 FLAD1Q8NFF5 587 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 OR56A3Q8NH54 315 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 GDAP1Q8TB36 358 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 CCHCR1Q8TD31 782 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 UTP15Q8TED0 518 aaKnown RBP4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 SH3RF3Q8TEJ3 882 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 TAF4BQ92750 862 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 SHISA4Q96DD7 197 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 BTBD2Q9BX70 525 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 DPH1Q9BZG8 443 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 RABEP2Q9H5N1 569 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 NOD2Q9HC29 1040 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 EPB41L4AQ9HCS5 686 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 ERVK-5Q9HDB9 667 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 POGKQ9P215 609 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 C5AR2Q9P296 337 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 SRRDQ9UH36 339 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 CHORDC1Q9UHD1 332 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 DAPP1Q9UN19 280 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 HDAC5Q9UQL6 1122 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 DNAJC16Q9Y2G8 782 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 ITSN1Q15811 1721 aa4.66□□□□□ -1.66
HMGB1P21-201ENST00000502313 PPIP5K1Q6PFW1 1433 aa4.65□□□□□ -1.66
HMGB1P21-201ENST00000502313 PIK3C2AO00443 1686 aa4.65□□□□□ -1.66
HMGB1P21-201ENST00000502313 CAMTA1Q9Y6Y1 1673 aa4.65□□□□□ -1.66
HMGB1P21-201ENST00000502313 ARHGAP10A1A4S6 786 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 BTBD11A6QL63 1104 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 FAM171A2A8MVW0 826 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 STX16-NPEPL1H3BU86 382 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 NFIBO00712 420 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 STX16O14662 325 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 ADAM20O43506 726 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 OPHN1O60890 802 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 MED26O95402 600 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 EFEMP2O95967 443 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 F9P00740 461 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 LRG1P02750 347 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 CLEC3BP05452 202 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 QDPRP09417 244 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 UBL4AP11441 157 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 C6P13671 934 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 CPA1P15085 419 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 PECAM1P16284 738 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 IFNAR1P17181 557 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 KLRK1P26718 216 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 PRDX5P30044 214 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 GCH1P30793 250 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 PAFAH1B1P43034 410 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 KCNJ5P48544 419 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 HARS2P49590 506 aaKnown RBP4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 ALDH3A2P51648 485 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 LIMK1P53667 647 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 MLLT6P55198 1093 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 SESN2P58004 480 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 RPP30P78346 268 aaKnown RBP4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 TLE1Q04724 770 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 DDR1Q08345 913 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 EPS8Q12929 822 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 BFSP1Q12934 665 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 TDGQ13569 410 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 ADIPOQQ15848 244 aa4.65□□□□□ -1.67
HMGB1P21-201ENST00000502313 MAPKAPK3Q16644 382 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms