RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 TSNAXIP1Q2TAA8 658 aa7.49□□□□□ -1.21
LYSMD3-203ENST00000500869 SLC10A6Q3KNW5 377 aa7.49□□□□□ -1.21
LYSMD3-203ENST00000500869 DNAL1Q4LDG9 190 aa7.49□□□□□ -1.21
LYSMD3-203ENST00000500869 KCNT1Q5JUK3 1230 aa7.49□□□□□ -1.21
LYSMD3-203ENST00000500869 RABGAP1LQ5R372 815 aa7.49□□□□□ -1.21
LYSMD3-203ENST00000500869 TMCO4Q5TGY1 634 aa7.49□□□□□ -1.21
LYSMD3-203ENST00000500869 MAP1SQ66K74 1059 aaPredicted RBP7.49□□□□□ -1.21
LYSMD3-203ENST00000500869 SCARA5Q6ZMJ2 495 aa7.49□□□□□ -1.21
LYSMD3-203ENST00000500869 UNC5AQ6ZN44 842 aa7.49□□□□□ -1.21
LYSMD3-203ENST00000500869 SLC26A9Q7LBE3 791 aa7.49□□□□□ -1.21
LYSMD3-203ENST00000500869 EMC1Q8N766 993 aa7.49□□□□□ -1.21
LYSMD3-203ENST00000500869 TTC8Q8TAM2 541 aa7.49□□□□□ -1.21
LYSMD3-203ENST00000500869 WWP1Q9H0M0 922 aa7.49□□□□□ -1.21
LYSMD3-203ENST00000500869 MINDY3Q9H8M7 445 aa7.49□□□□□ -1.21
LYSMD3-203ENST00000500869 ZDHHC7Q9NXF8 308 aa7.49□□□□□ -1.21
LYSMD3-203ENST00000500869 HBS1LQ9Y450 684 aaKnown RBP7.49□□□□□ -1.21
LYSMD3-203ENST00000500869 SDR42E2A6NKP2 422 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 E5RJQ4 531 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 GOLGA8MH3BSY2 632 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 COPEO14579 308 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 B4GALT5O43286 388 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 KRT38O76015 456 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 FAM163BP0C2L3 166 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 CCDC130P13994 396 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 BGNP21810 368 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 SERPINB3P29508 390 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 FDFT1P37268 417 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 CDH6P55285 790 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 IRX1P78414 480 aaPredicted RBP7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 RBP5P82980 135 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 SP4Q02446 784 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 ADCY1Q08828 1119 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 HNRNPDQ14103 355 aaKnown RBP7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 PCBP1Q15365 356 aaKnown RBP eCLIP7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 TRMT5Q32P41 509 aaKnown RBP7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 ACSBG2Q5FVE4 666 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 TREML2Q5T2D2 321 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 FAM102AQ5T9C2 384 aaPredicted RBP7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 RFWD3Q6PCD5 774 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 AAGABQ6PD74 315 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 NPNTQ6UXI9 565 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 CDHR3Q6ZTQ4 885 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 LRRC52Q8N7C0 313 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 FAM111AQ96PZ2 611 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 DNAJC28Q9NX36 388 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 MTMR10Q9NXD2 777 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 HESX1Q9UBX0 185 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 SSX2IPQ9Y2D8 614 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 TBC1D30Q9Y2I9 924 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 RAD54BQ9Y620 910 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 TRIM49D1C9J1S8 452 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 KIF3CO14782 793 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 PRPSAP2O60256 369 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 TM7SF2O76062 418 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 DYNLT1P63172 113 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 BASP1P80723 227 aaKnown RBP7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 KHDC1Q4VXA5 237 aaKnown RBP7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 TMEM192Q8IY95 271 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 NRG4Q8WWG1 115 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 DNAJC9Q8WXX5 260 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 MCMBPQ9BTE3 642 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 SNRNP25Q9BV90 132 aaKnown RBP7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 NRDE2Q9H7Z3 1164 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 NMRK1Q9NWW6 199 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 TAGLN3Q9UI15 199 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 CXorf49A8MYA2 514 aaPredicted RBP7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 NVLO15381 856 aaKnown RBP7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 GABBR2O75899 941 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 ITGB3P05106 788 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 RPSAP08865 295 aaKnown RBP7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 CSH1P0DML2 217 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 CSH2P0DML3 217 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 CPOXP36551 454 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 HDAC4P56524 1084 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 MMRN1Q13201 1228 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 DCAF4L1Q3SXM0 396 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 ZNF394Q53GI3 561 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 MBLAC2Q68D91 279 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 DSTYKQ6XUX3 929 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 STRADAQ7RTN6 431 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 TRMT1LQ7Z2T5 733 aaKnown RBP7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 LMNTD2Q8IXW0 634 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 E2F7Q96AV8 911 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 NR1H4Q96RI1 486 aaPredicted RBP7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 NT5C1AQ9BXI3 368 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 ZC3H7BQ9UGR2 993 aaKnown RBP7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 ADAM28Q9UKQ2 775 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 TSPAN16Q9UKR8 245 aa7.48□□□□□ -1.21
LYSMD3-203ENST00000500869 CXCL11O14625 94 aa7.47□□□□□ -1.21
LYSMD3-203ENST00000500869 PRKCGP05129 697 aa7.47□□□□□ -1.21
LYSMD3-203ENST00000500869 MYL2P10916 166 aa7.47□□□□□ -1.21
LYSMD3-203ENST00000500869 NEFHP12036 1026 aa7.47□□□□□ -1.21
LYSMD3-203ENST00000500869 CD19P15391 556 aa7.47□□□□□ -1.21
LYSMD3-203ENST00000500869 DNAJB1P25685 340 aa7.47□□□□□ -1.21
LYSMD3-203ENST00000500869 GLUD2P49448 558 aa7.47□□□□□ -1.21
LYSMD3-203ENST00000500869 XIAPP98170 497 aa7.47□□□□□ -1.21
LYSMD3-203ENST00000500869 SF3A3Q12874 501 aaKnown RBP eCLIP7.47□□□□□ -1.21
LYSMD3-203ENST00000500869 TMEM132DQ14C87 1099 aa7.47□□□□□ -1.21
LYSMD3-203ENST00000500869 NAA25Q14CX7 972 aa7.47□□□□□ -1.21
LYSMD3-203ENST00000500869 SEPT7Q16181 437 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms