RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 VNN2O95498 520 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 CXCL14O95715 111 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 CD48P09326 243 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 PTPN7P35236 360 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 BMPR1AP36894 532 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 COILP38432 576 aaPredicted RBP7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 ATXN1P54253 815 aaKnown RBP7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 USP46P62068 366 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 DYNLT1P63172 113 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 PITX1P78337 314 aaPredicted RBP7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 DR1Q01658 176 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 GUCY2DQ02846 1103 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 MTMR3Q13615 1198 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 RAB33AQ14088 237 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 TFDP2Q14188 446 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 ARL13BQ3SXY8 428 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 PPP6R3Q5H9R7 873 aaPredicted RBP7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 EFHC2Q5JST6 749 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 CCDC137Q6PK04 289 aaKnown RBP7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 BEND5Q7L4P6 421 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 BHLHA9Q7RTU4 235 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 TMC7Q7Z402 723 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 ANKS1BQ7Z6G8 1248 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 SCD5Q86SK9 330 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 IFT20Q8IY31 132 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 CCDC185Q8N715 623 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 PRELID2Q8N945 189 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 ZNF461Q8TAF7 563 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 SP7Q8TDD2 431 aaPredicted RBP7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 MICAL1Q8TDZ2 1067 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 HDAC7Q8WUI4 952 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 CLP1Q92989 425 aaKnown RBP7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 FBXO32Q969P5 355 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 NT5C3BQ969T7 300 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 PNKPQ96T60 521 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 SNRNP25Q9BV90 132 aaKnown RBP7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 CRISPLD1Q9H336 500 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 WDCPQ9H6R7 721 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 ENTPD7Q9NQZ7 604 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 TLR8Q9NR97 1041 aaKnown RBP7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 PIGVQ9NUD9 493 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 GMIPQ9P107 970 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 STIM2Q9P246 746 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 AMACRQ9UHK6 382 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 FEZ2Q9UHY8 353 aaPredicted RBP7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 RASAL2Q9UJF2 1139 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 FZD10Q9ULW2 581 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 AP4E1Q9UPM8 1137 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 RWDD3Q9Y3V2 267 aa7.4□□□□□ -1.22
GPATCH4-209ENST00000498641 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 FAM187AA6NFU0 413 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 MDM4O15151 490 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 TEX28O15482 410 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 TTI1O43156 1089 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 DAPK3O43293 454 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 CST8O60676 142 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 HEXIM1O94992 359 aaKnown RBP7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 CSPG5O95196 566 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 SEC24AO95486 1093 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 ECEL1O95672 775 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 SPATA31D3P0C874 917 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 CTSAP10619 480 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 ATF2P15336 505 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 ATF6P18850 670 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 KLRC2P26717 231 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 L1CAMP32004 1257 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 ADRA1BP35368 520 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 ARL4AP40617 200 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 FNTAP49354 379 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 PSEN1P49768 467 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 EPHB3P54753 998 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 AIF1P55008 147 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 TAF10Q12962 218 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 MMRN1Q13201 1228 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 KLF1Q13351 362 aaPredicted RBP7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 DHX34Q14147 1143 aaKnown RBP7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 DPYSL3Q14195 570 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 VEPH1Q14D04 833 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 BRD3Q15059 726 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 PPP1R7Q15435 360 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 SIX1Q15475 284 aaPredicted RBP7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 CCNG2Q16589 344 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 CYP1B1Q16678 543 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 CA9Q16790 459 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 ANKRD20A8PQ5CZ79 823 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 OTUD1Q5VV17 481 aaPredicted RBP7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 SPATA31D4Q6ZUB0 917 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 BBS12Q6ZW61 710 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 CYP4V2Q6ZWL3 525 aaPredicted RBP7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 GSTA5Q7RTV2 222 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 TAC4Q86UU9 113 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 PSTKQ8IV42 348 aaKnown RBP7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 GPR65Q8IYL9 337 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 ZDHHC14Q8IZN3 488 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 C12orf50Q8NA57 414 aaPredicted RBP7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 TTC13Q8NBP0 860 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 DQX1Q8TE96 717 aaKnown RBP7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 GRK7Q8WTQ7 553 aa7.39□□□□□ -1.23
GPATCH4-209ENST00000498641 IFT81Q8WYA0 676 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms