RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 OSER1Q9NX31 292 aa15.53■□□□□ 0.08
TRAF4-212ENST00000498540 SUSD2Q9UGT4 822 aa15.53■□□□□ 0.08
TRAF4-212ENST00000498540 HMGXB4Q9UGU5 601 aa15.53■□□□□ 0.08
TRAF4-212ENST00000498540 PCDHB9Q9Y5E1 797 aa15.53■□□□□ 0.08
TRAF4-212ENST00000498540 LOC400499M0QZD8 3231 aa15.53■□□□□ 0.08
TRAF4-212ENST00000498540 MDM4O15151 490 aa15.52■□□□□ 0.08
TRAF4-212ENST00000498540 CYP26A1O43174 497 aa15.52■□□□□ 0.08
TRAF4-212ENST00000498540 CISD3P0C7P0 127 aa15.52■□□□□ 0.08
TRAF4-212ENST00000498540 DGKGP49619 791 aa15.52■□□□□ 0.08
TRAF4-212ENST00000498540 MAP3K7CLP57077 242 aa15.52■□□□□ 0.08
TRAF4-212ENST00000498540 EHHADHQ08426 723 aa15.52■□□□□ 0.08
TRAF4-212ENST00000498540 ZNF667Q5HYK9 610 aa15.52■□□□□ 0.08
TRAF4-212ENST00000498540 SYCP2LQ5T4T6 812 aa15.52■□□□□ 0.08
TRAF4-212ENST00000498540 SPRYD3Q8NCJ5 442 aa15.52■□□□□ 0.08
TRAF4-212ENST00000498540 FOXJ1Q92949 421 aa15.52■□□□□ 0.08
TRAF4-212ENST00000498540 DHX58Q96C10 678 aa15.52■□□□□ 0.08
TRAF4-212ENST00000498540 FBXO44Q9H4M3 255 aa15.52■□□□□ 0.08
TRAF4-212ENST00000498540 CSNK1G1Q9HCP0 422 aa15.52■□□□□ 0.08
TRAF4-212ENST00000498540 CYLDQ9NQC7 956 aa15.52■□□□□ 0.08
TRAF4-212ENST00000498540 TLR8Q9NR97 1041 aaKnown RBP15.52■□□□□ 0.08
TRAF4-212ENST00000498540 FAM49BQ9NUQ9 324 aa15.52■□□□□ 0.08
TRAF4-212ENST00000498540 PLK2Q9NYY3 685 aa15.52■□□□□ 0.08
TRAF4-212ENST00000498540 WDR35Q9P2L0 1181 aa15.52■□□□□ 0.08
TRAF4-212ENST00000498540 IGSF10Q6WRI0 2623 aa15.52■□□□□ 0.07
TRAF4-212ENST00000498540 LRRIQ3A6PVS8 624 aaPredicted RBP15.51■□□□□ 0.07
TRAF4-212ENST00000498540 GFRA2O00451 464 aa15.51■□□□□ 0.07
TRAF4-212ENST00000498540 CBFA2T3O75081 653 aa15.51■□□□□ 0.07
TRAF4-212ENST00000498540 VNN1O95497 513 aa15.51■□□□□ 0.07
TRAF4-212ENST00000498540 GNSP15586 552 aa15.51■□□□□ 0.07
TRAF4-212ENST00000498540 CASP1P29466 404 aa15.51■□□□□ 0.07
TRAF4-212ENST00000498540 CD6P30203 668 aa15.51■□□□□ 0.07
TRAF4-212ENST00000498540 ATP5C1P36542 298 aaKnown RBP15.51■□□□□ 0.07
TRAF4-212ENST00000498540 NASPP49321 788 aaPredicted RBP15.51■□□□□ 0.07
TRAF4-212ENST00000498540 SNRPFP62306 86 aaKnown RBP15.51■□□□□ 0.07
TRAF4-212ENST00000498540 NCOA4Q13772 614 aa15.51■□□□□ 0.07
TRAF4-212ENST00000498540 FUT11Q495W5 492 aa15.51■□□□□ 0.07
TRAF4-212ENST00000498540 WDR45BQ5MNZ6 344 aa15.51■□□□□ 0.07
TRAF4-212ENST00000498540 CNNM4Q6P4Q7 775 aa15.51■□□□□ 0.07
TRAF4-212ENST00000498540 CCNI2Q6ZMN8 369 aaPredicted RBP15.51■□□□□ 0.07
TRAF4-212ENST00000498540 SLCO6A1Q86UG4 719 aa15.51■□□□□ 0.07
TRAF4-212ENST00000498540 C12orf56Q8IXR9 622 aa15.51■□□□□ 0.07
TRAF4-212ENST00000498540 ZCCHC9Q8N567 271 aaKnown RBP15.51■□□□□ 0.07
TRAF4-212ENST00000498540 C12orf29Q8N999 325 aa15.51■□□□□ 0.07
TRAF4-212ENST00000498540 JAKMIP2Q96AA8 810 aa15.51■□□□□ 0.07
TRAF4-212ENST00000498540 TOE1Q96GM8 510 aaKnown RBP15.51■□□□□ 0.07
TRAF4-212ENST00000498540 CUEDC2Q9H467 287 aa15.51■□□□□ 0.07
TRAF4-212ENST00000498540 IL21RQ9HBE5 538 aa15.51■□□□□ 0.07
TRAF4-212ENST00000498540 LSM7Q9UK45 103 aaKnown RBP15.51■□□□□ 0.07
TRAF4-212ENST00000498540 NUDT5Q9UKK9 219 aa15.51■□□□□ 0.07
TRAF4-212ENST00000498540 MTMR6Q9Y217 621 aa15.51■□□□□ 0.07
TRAF4-212ENST00000498540 STON1Q9Y6Q2 735 aa15.51■□□□□ 0.07
TRAF4-212ENST00000498540 MEI4A8MW99 385 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 EXOC3O60645 756 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 C4BPAP04003 597 aaKnown RBP15.5■□□□□ 0.07
TRAF4-212ENST00000498540 NDST1P52848 882 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 AMPD3Q01432 767 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 GOLGA8FQ08AF8 430 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 GOLGA8DPQ0D2H9 430 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 STK38Q15208 465 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 BMT2Q1RMZ1 405 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 COL28A1Q2UY09 1125 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 Q6ZNB5 142 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 UNC13DQ70J99 1090 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 PDZD3Q86UT5 571 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 LINC00301Q8NCQ3 95 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 MDM1Q8TC05 714 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 PARD3BQ8TEW8 1205 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 DNASE2BQ8WZ79 361 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 C7orf25Q9BPX7 421 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 GPR174Q9BXC1 333 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 MKRN2Q9H000 416 aaKnown RBP15.5■□□□□ 0.07
TRAF4-212ENST00000498540 CCDC86Q9H6F5 360 aaKnown RBP15.5■□□□□ 0.07
TRAF4-212ENST00000498540 UPF2Q9HAU5 1272 aaKnown RBP15.5■□□□□ 0.07
TRAF4-212ENST00000498540 PRDM16Q9HAZ2 1276 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 NMUR1Q9HB89 426 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 SLC39A2Q9NP94 309 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 WSB2Q9NYS7 404 aaPredicted RBP15.5■□□□□ 0.07
TRAF4-212ENST00000498540 USP36Q9P275 1121 aaKnown RBP15.5■□□□□ 0.07
TRAF4-212ENST00000498540 PCOLCE2Q9UKZ9 415 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 SCML2Q9UQR0 700 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 APC2O95996 2303 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 CELSR3Q9NYQ7 3312 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 CKAP5Q14008 2032 aa15.5■□□□□ 0.07
TRAF4-212ENST00000498540 ACACAQ13085 2346 aa15.49■□□□□ 0.07
TRAF4-212ENST00000498540 A0A1B0GTW7 788 aa15.49■□□□□ 0.07
TRAF4-212ENST00000498540 A0A1W2PQH9 124 aa15.49■□□□□ 0.07
TRAF4-212ENST00000498540 KCNJ18B7U540 433 aa15.49■□□□□ 0.07
TRAF4-212ENST00000498540 HHLA1C9JL84 531 aa15.49■□□□□ 0.07
TRAF4-212ENST00000498540 NCAM1P13591 858 aa15.49■□□□□ 0.07
TRAF4-212ENST00000498540 ADORA2BP29275 332 aa15.49■□□□□ 0.07
TRAF4-212ENST00000498540 CLDN10P78369 228 aa15.49■□□□□ 0.07
TRAF4-212ENST00000498540 SOWAHCQ53LP3 525 aaPredicted RBP15.49■□□□□ 0.07
TRAF4-212ENST00000498540 CLEC20AQ6ZU45 233 aa15.49■□□□□ 0.07
TRAF4-212ENST00000498540 GLRX5Q86SX6 157 aa15.49■□□□□ 0.07
TRAF4-212ENST00000498540 CRYBG2Q8N1P7 616 aa15.49■□□□□ 0.07
TRAF4-212ENST00000498540 ZDHHC5Q9C0B5 715 aa15.49■□□□□ 0.07
TRAF4-212ENST00000498540 MIR1-1HGQ9H1L0 117 aa15.49■□□□□ 0.07
TRAF4-212ENST00000498540 BLZF1Q9H2G9 400 aa15.49■□□□□ 0.07
TRAF4-212ENST00000498540 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.49■□□□□ 0.071e-9■■■■■ 64.8
TRAF4-212ENST00000498540 FBXO10Q9UK96 956 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms