RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	CRACR2A	Q9BSW2	395 aa		5.69	□□□□□ -1.5
HMGXB4-208	ENST00000498325	TCHP	Q9BT92	498 aa		5.69	□□□□□ -1.5
HMGXB4-208	ENST00000498325	MSTO1	Q9BUK6	570 aa		5.69	□□□□□ -1.5
HMGXB4-208	ENST00000498325	KIFC3	Q9BVG8	833 aa		5.69	□□□□□ -1.5
HMGXB4-208	ENST00000498325	KATNAL1	Q9BW62	490 aa		5.69	□□□□□ -1.5
HMGXB4-208	ENST00000498325	NFKBIZ	Q9BYH8	718 aa		5.69	□□□□□ -1.5
HMGXB4-208	ENST00000498325	INO80B	Q9C086	356 aa	Predicted RBP	5.69	□□□□□ -1.5
HMGXB4-208	ENST00000498325	IKZF4	Q9H2S9	585 aa		5.69	□□□□□ -1.5
HMGXB4-208	ENST00000498325	DEF6	Q9H4E7	631 aa		5.69	□□□□□ -1.5
HMGXB4-208	ENST00000498325	NLRC4	Q9NPP4	1024 aa		5.69	□□□□□ -1.5
HMGXB4-208	ENST00000498325	XPNPEP3	Q9NQH7	507 aa		5.69	□□□□□ -1.5
HMGXB4-208	ENST00000498325	AGPAT5	Q9NUQ2	364 aa		5.69	□□□□□ -1.5
HMGXB4-208	ENST00000498325	PRMT7	Q9NVM4	692 aa	Predicted RBP	5.69	□□□□□ -1.5
HMGXB4-208	ENST00000498325	TRMT1	Q9NXH9	659 aa	Known RBP	5.69	□□□□□ -1.5
HMGXB4-208	ENST00000498325	GCNT4	Q9P109	453 aa		5.69	□□□□□ -1.5
HMGXB4-208	ENST00000498325	PPP2R2C	Q9Y2T4	447 aa		5.69	□□□□□ -1.5
HMGXB4-208	ENST00000498325	BZW2	Q9Y6E2	419 aa	Known RBP	5.69	□□□□□ -1.5
HMGXB4-208	ENST00000498325	STYXL1	Q9Y6J8	313 aa		5.69	□□□□□ -1.5
HMGXB4-208	ENST00000498325	SLC4A7	Q9Y6M7	1214 aa		5.69	□□□□□ -1.5
HMGXB4-208	ENST00000498325	DUSP10	Q9Y6W6	482 aa		5.69	□□□□□ -1.5
HMGXB4-208	ENST00000498325	PMF1-BGLAP	U3KQ54	211 aa		5.69	□□□□□ -1.5
HMGXB4-208	ENST00000498325	ADGRA3	Q8IWK6	1321 aa		5.69	□□□□□ -1.5
HMGXB4-208	ENST00000498325	NRCAM	Q92823	1304 aa		5.69	□□□□□ -1.5
HMGXB4-208	ENST00000498325	PTPRZ1	P23471	2315 aa	Predicted RBP	5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	TECTA	O75443	2155 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	FAM221A	A4D161	298 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	GOLGA8IP	A6NC78	632 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	LRRC53	A6NM62	1247 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	GOLGA8J	A6NMD2	632 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	EIF3CL	B5ME19	914 aa	Known RBP	5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	TISP43	B9A030	160 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	C1QTNF3-AMACR	E9PGA6	284 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	INO80B-WBP1	J3KQ70	363 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	OGT	O15294	1046 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	DNAJA2	O60884	412 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	TOM1L1	O75674	476 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	NOL4	O94818	638 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	NDUFA10	O95299	355 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	PLA2G1B	P04054	148 aa	Known RBP	5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	SERPING1	P05155	500 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	MYL3	P08590	195 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	ZNF286B	P0CG31	522 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	TRIM49	P0CI25	452 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	TRIM49C	P0CI26	452 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	UCHL3	P15374	230 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	FER	P16591	822 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	AVPR2	P30518	371 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	ADSS	P30520	456 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	STAT1	P42224	750 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	CLCN3	P51790	818 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	ACLY	P53396	1101 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	AP3M2	P53677	418 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	MYL7	Q01449	175 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	CYP24A1	Q07973	514 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	DRP2	Q13474	957 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	PRPF4B	Q13523	1007 aa	Known RBP	5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	PSMD6	Q15008	389 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	SPA17	Q15506	151 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	ASIC2	Q16515	512 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	KYAT1	Q16773	422 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	FAM187B	Q17R55	369 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	KIAA0753	Q2KHM9	967 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	ARHGAP29	Q52LW3	1261 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	KRT39	Q6A163	491 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	SLC39A4	Q6P5W5	647 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	WDR59	Q6PJI9	974 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	RAD9B	Q6WBX8	426 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	SRGAP1	Q7Z6B7	1085 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	ZNF410	Q86VK4	478 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	VPS36	Q86VN1	386 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	ADHFE1	Q8IWW8	467 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	REXO1L1P	Q8IX06	675 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	PHC3	Q8NDX5	983 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	KIF18A	Q8NI77	898 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	PARD3B	Q8TEW8	1205 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	GATAD2B	Q8WXI9	593 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	SAAL1	Q96ER3	474 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	PPP1R13B	Q96KQ4	1090 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	NLRP4	Q96MN2	994 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	EIF3C	Q99613	913 aa	Known RBP	5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	CHP1	Q99653	195 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	ACO2	Q99798	780 aa	Known RBP	5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	FAM213A	Q9BRX8	229 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	TARS2	Q9BW92	718 aa	Known RBP	5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	CDADC1	Q9BWV3	514 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	INTS2	Q9H0H0	1204 aa	Known RBP	5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	MTIF3	Q9H2K0	278 aa	Known RBP	5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	FZD8	Q9H461	694 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	TMEM8A	Q9HCN3	771 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	STARD7	Q9NQZ5	370 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	ERVK13-1	Q9NX77	482 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	AIPL1	Q9NZN9	384 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	AKT3	Q9Y243	479 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	PAXBP1	Q9Y5B6	917 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	AK5	Q9Y6K8	562 aa		5.68	□□□□□ -1.5
HMGXB4-208	ENST00000498325	MYO9B	Q13459	2157 aa		5.67	□□□□□ -1.5
HMGXB4-208	ENST00000498325	SETX	Q7Z333	2677 aa	Known RBP	5.67	□□□□□ -1.5
HMGXB4-208	ENST00000498325	KMT2E	Q8IZD2	1858 aa		5.67	□□□□□ -1.5

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