RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 ST3GAL2Q16842 350 aa4.67□□□□□ -1.66
SMC4-227ENST00000497984 C18orf65Q6ZTR6 163 aa4.67□□□□□ -1.66
SMC4-227ENST00000497984 TFAP2DQ7Z6R9 452 aa4.67□□□□□ -1.66
SMC4-227ENST00000497984 STK31Q9BXU1 1019 aa4.67□□□□□ -1.66
SMC4-227ENST00000497984 NUAK2Q9H093 628 aa4.67□□□□□ -1.66
SMC4-227ENST00000497984 SACM1LQ9NTJ5 587 aa4.67□□□□□ -1.66
SMC4-227ENST00000497984 TMEM45AQ9NWC5 275 aa4.67□□□□□ -1.66
SMC4-227ENST00000497984 DKK4Q9UBT3 224 aa4.67□□□□□ -1.66
SMC4-227ENST00000497984 STEAP1Q9UHE8 339 aa4.67□□□□□ -1.66
SMC4-227ENST00000497984 VPS51Q9UID3 782 aa4.67□□□□□ -1.66
SMC4-227ENST00000497984 TRIP12Q14669 1992 aaPredicted RBP4.67□□□□□ -1.66
SMC4-227ENST00000497984 SPATA31A1Q5TZJ5 1347 aa4.67□□□□□ -1.66
SMC4-227ENST00000497984 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.66□□□□□ -1.66
SMC4-227ENST00000497984 C16orf96A6NNT2 1141 aa4.66□□□□□ -1.66
SMC4-227ENST00000497984 FOXN3O00409 490 aaPredicted RBP4.66□□□□□ -1.66
SMC4-227ENST00000497984 AKAP10O43572 662 aa4.66□□□□□ -1.66
SMC4-227ENST00000497984 TLX3O43711 291 aaPredicted RBP4.66□□□□□ -1.66
SMC4-227ENST00000497984 EPN2O95208 641 aa4.66□□□□□ -1.66
SMC4-227ENST00000497984 T-ENOLP0DO92 83 aa4.66□□□□□ -1.66
SMC4-227ENST00000497984 IL1R1P14778 569 aa4.66□□□□□ -1.66
SMC4-227ENST00000497984 ACVR2AP27037 513 aa4.66□□□□□ -1.66
SMC4-227ENST00000497984 NTSR1P30989 418 aa4.66□□□□□ -1.66
SMC4-227ENST00000497984 CPT1AP50416 773 aa4.66□□□□□ -1.66
SMC4-227ENST00000497984 TXNL4AP83876 142 aaKnown RBP4.66□□□□□ -1.66
SMC4-227ENST00000497984 STK3Q13188 491 aa4.66□□□□□ -1.66
SMC4-227ENST00000497984 TTF1Q15361 905 aaPredicted RBP4.66□□□□□ -1.66
SMC4-227ENST00000497984 APOA5Q6Q788 366 aa4.66□□□□□ -1.66
SMC4-227ENST00000497984 KIAA0319LQ8IZA0 1049 aa4.66□□□□□ -1.66
SMC4-227ENST00000497984 BCAS4Q8TDM0 211 aa4.66□□□□□ -1.66
SMC4-227ENST00000497984 SLC25A28Q96A46 364 aa4.66□□□□□ -1.66
SMC4-227ENST00000497984 P2RY11Q96G91 374 aa4.66□□□□□ -1.66
SMC4-227ENST00000497984 ZNF668Q96K58 619 aaPredicted RBP4.66□□□□□ -1.66
SMC4-227ENST00000497984 NLRP4Q96MN2 994 aa4.66□□□□□ -1.66
SMC4-227ENST00000497984 FCRL5Q96RD9 977 aa4.66□□□□□ -1.66
SMC4-227ENST00000497984 TMEM60Q9H2L4 133 aa4.66□□□□□ -1.66
SMC4-227ENST00000497984 VPS45Q9NRW7 570 aa4.66□□□□□ -1.66
SMC4-227ENST00000497984 ZNF112Q9UJU3 913 aa4.66□□□□□ -1.66
SMC4-227ENST00000497984 ZNF180Q9UJW8 692 aa4.66□□□□□ -1.66
SMC4-227ENST00000497984 SLC27A6Q9Y2P4 619 aa4.66□□□□□ -1.66
SMC4-227ENST00000497984 SIRT4Q9Y6E7 314 aaPredicted RBP4.66□□□□□ -1.66
SMC4-227ENST00000497984 E2F8A0AVK6 867 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 CAPN8A6NHC0 703 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 RAB27BO00194 218 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 FRS3O43559 492 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 CA12O43570 354 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 SLC28A2O43868 658 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 CD63P08962 238 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 HOXA7P31268 230 aaPredicted RBP4.65□□□□□ -1.67
SMC4-227ENST00000497984 COPAP53621 1224 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 RHDQ02161 417 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 SLC29A2Q14542 456 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 PTPROQ16827 1216 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 ZNF585BQ52M93 769 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 C3orf38Q5JPI3 329 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 MANEAQ5SRI9 462 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 FAM57BQ71RH2 274 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 FAM71DQ8N9W8 422 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 PRR11Q96HE9 360 aaPredicted RBP4.65□□□□□ -1.67
SMC4-227ENST00000497984 GPATCH3Q96I76 525 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 VPS50Q96JG6 964 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 PPP1R10Q96QC0 940 aaKnown RBP4.65□□□□□ -1.67
SMC4-227ENST00000497984 HIST1H2AAQ96QV6 131 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 ZPBPQ9BS86 351 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 FAM83DQ9H4H8 585 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 MRPL44Q9H9J2 332 aaKnown RBP4.65□□□□□ -1.67
SMC4-227ENST00000497984 COL20A1Q9P218 1284 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 MID2Q9UJV3 735 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 HDAC9Q9UKV0 1011 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 EVPLQ92817 2033 aa4.65□□□□□ -1.67
SMC4-227ENST00000497984 SLC22A23A1A5C7 686 aa4.64□□□□□ -1.67
SMC4-227ENST00000497984 AQP7P3A6NL99 342 aa4.64□□□□□ -1.67
SMC4-227ENST00000497984 ISM1B1AKI9 464 aa4.64□□□□□ -1.67
SMC4-227ENST00000497984 CTIFO43310 598 aaKnown RBP4.64□□□□□ -1.67
SMC4-227ENST00000497984 TXNP10599 105 aaKnown RBP4.64□□□□□ -1.67
SMC4-227ENST00000497984 BRAFP15056 766 aa4.64□□□□□ -1.67
SMC4-227ENST00000497984 IBSPP21815 317 aaPredicted RBP4.64□□□□□ -1.67
SMC4-227ENST00000497984 RPS6KB1P23443 525 aa4.64□□□□□ -1.67
SMC4-227ENST00000497984 GALNSP34059 522 aa4.64□□□□□ -1.67
SMC4-227ENST00000497984 HTR7P34969 479 aa4.64□□□□□ -1.67
SMC4-227ENST00000497984 IL6STP40189 918 aaPredicted RBP4.64□□□□□ -1.67
SMC4-227ENST00000497984 RAB27AP51159 221 aa4.64□□□□□ -1.67
SMC4-227ENST00000497984 JAK3P52333 1124 aa4.64□□□□□ -1.67
SMC4-227ENST00000497984 EIF4A1P60842 406 aaKnown RBP4.64□□□□□ -1.67
SMC4-227ENST00000497984 RPS16P62249 146 aaKnown RBP4.64□□□□□ -1.67
SMC4-227ENST00000497984 DNASE1L3Q13609 305 aa4.64□□□□□ -1.67
SMC4-227ENST00000497984 CLCA4Q14CN2 919 aa4.64□□□□□ -1.67
SMC4-227ENST00000497984 CNN3Q15417 329 aaKnown RBP4.64□□□□□ -1.67
SMC4-227ENST00000497984 PRTGQ2VWP7 1150 aa4.64□□□□□ -1.67
SMC4-227ENST00000497984 GRHL2Q6ISB3 625 aa4.64□□□□□ -1.67
SMC4-227ENST00000497984 CLEC9AQ6UXN8 241 aa4.64□□□□□ -1.67
SMC4-227ENST00000497984 Q6ZTC4 211 aa4.64□□□□□ -1.67
SMC4-227ENST00000497984 ASB5Q8WWX0 329 aa4.64□□□□□ -1.67
SMC4-227ENST00000497984 RUNDC1Q96C34 613 aa4.64□□□□□ -1.67
SMC4-227ENST00000497984 MSI2Q96DH6 328 aaKnown RBP4.64□□□□□ -1.67
SMC4-227ENST00000497984 ZDHHC12Q96GR4 267 aa4.64□□□□□ -1.67
SMC4-227ENST00000497984 ZNF479Q96JC4 524 aa4.64□□□□□ -1.67
SMC4-227ENST00000497984 GATA5Q9BWX5 397 aaPredicted RBP4.64□□□□□ -1.67
SMC4-227ENST00000497984 CDH19Q9H159 772 aa4.64□□□□□ -1.67
SMC4-227ENST00000497984 CHST8Q9H2A9 424 aa4.64□□□□□ -1.67
SMC4-227ENST00000497984 SLCO5A1Q9H2Y9 848 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms