RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 TNFRSF8P28908 595 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 AFF1P51825 1210 aaKnown RBP20.7■□□□□ 0.9
ACTN4-208ENST00000497637 SNX16P57768 344 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 TAS2R40P59535 323 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 OGDHQ02218 1023 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 CSTF1Q05048 431 aaKnown RBP20.7■□□□□ 0.9
ACTN4-208ENST00000497637 BEND6Q5SZJ8 279 aaPredicted RBP20.7■□□□□ 0.9
ACTN4-208ENST00000497637 TTC30AQ86WT1 665 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 SLC13A5Q86YT5 568 aaPredicted RBP20.7■□□□□ 0.9
ACTN4-208ENST00000497637 KLHL7Q8IXQ5 586 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 KATNAL2Q8IYT4 538 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 TMEM86AQ8N2M4 240 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 HDAC7Q8WUI4 952 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 SLC35F5Q8WV83 523 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 TNIP3Q96KP6 325 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 SENP8Q96LD8 212 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 MCEEQ96PE7 176 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 OSBPL6Q9BZF3 934 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 FOXQ1Q9C009 403 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 DPEP3Q9H4B8 488 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 STIM2Q9P246 746 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 TJP2Q9UDY2 1190 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 ANGPTL2Q9UKU9 493 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 CLUHO75153 1309 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 GOLGA6L10A0A0M3HER8 536 aa20.69■□□□□ 0.9
ACTN4-208ENST00000497637 GOLGA8SH3BPF8 625 aa20.69■□□□□ 0.9
ACTN4-208ENST00000497637 LMO2P25791 158 aa20.69■□□□□ 0.9
ACTN4-208ENST00000497637 AARSP49588 968 aaKnown RBP eCLIP20.69■□□□□ 0.9
ACTN4-208ENST00000497637 ZNF252P-AS1Q0IIN9 211 aa20.69■□□□□ 0.9
ACTN4-208ENST00000497637 GRIK3Q13003 919 aa20.69■□□□□ 0.9
ACTN4-208ENST00000497637 WSCD1Q658N2 575 aa20.69■□□□□ 0.9
ACTN4-208ENST00000497637 TMEM110Q86TL2 294 aa20.69■□□□□ 0.9
ACTN4-208ENST00000497637 ANKRD52Q8NB46 1076 aa20.69■□□□□ 0.9
ACTN4-208ENST00000497637 CCDC26Q8TAB7 109 aa20.69■□□□□ 0.9
ACTN4-208ENST00000497637 SPATA18Q8TC71 538 aa20.69■□□□□ 0.9
ACTN4-208ENST00000497637 KLHL5Q96PQ7 755 aa20.69■□□□□ 0.9
ACTN4-208ENST00000497637 FAM126AQ9BYI3 521 aaPredicted RBP20.69■□□□□ 0.9
ACTN4-208ENST00000497637 CYLDQ9NQC7 956 aa20.69■□□□□ 0.9
ACTN4-208ENST00000497637 CCDC195A0A1B0GUA6 201 aa20.68■□□□□ 0.9
ACTN4-208ENST00000497637 KANSL1LA0AUZ9 987 aa20.68■□□□□ 0.9
ACTN4-208ENST00000497637 BHMG1C9JSJ3 638 aaPredicted RBP20.68■□□□□ 0.9
ACTN4-208ENST00000497637 ANHXE9PGG2 379 aa20.68■□□□□ 0.9
ACTN4-208ENST00000497637 SART1O43290 800 aaKnown RBP20.68■□□□□ 0.9
ACTN4-208ENST00000497637 RAD51CO43502 376 aa20.68■□□□□ 0.9
ACTN4-208ENST00000497637 LILRB5O75023 590 aa20.68■□□□□ 0.9
ACTN4-208ENST00000497637 SLC7A5Q01650 507 aa20.68■□□□□ 0.9
ACTN4-208ENST00000497637 MAP9Q49MG5 647 aa20.68■□□□□ 0.9
ACTN4-208ENST00000497637 AADACL2Q6P093 401 aa20.68■□□□□ 0.9
ACTN4-208ENST00000497637 TMEM173Q86WV6 379 aaPredicted RBP20.68■□□□□ 0.9
ACTN4-208ENST00000497637 IFT20Q8IY31 132 aa20.68■□□□□ 0.9
ACTN4-208ENST00000497637 JOSD2Q8TAC2 188 aa20.68■□□□□ 0.9
ACTN4-208ENST00000497637 MAIP1Q8WWC4 291 aa20.68■□□□□ 0.9
ACTN4-208ENST00000497637 UROC1Q96N76 676 aa20.68■□□□□ 0.9
ACTN4-208ENST00000497637 GDF3Q9NR23 364 aa20.68■□□□□ 0.9
ACTN4-208ENST00000497637 FAM49BQ9NUQ9 324 aa20.68■□□□□ 0.9
ACTN4-208ENST00000497637 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.68■□□□□ 0.9
ACTN4-208ENST00000497637 HCRTO43612 131 aa20.67■□□□□ 0.9
ACTN4-208ENST00000497637 SEC31AO94979 1220 aaKnown RBP20.67■□□□□ 0.9
ACTN4-208ENST00000497637 CNPP09543 421 aaKnown RBP20.67■□□□□ 0.9
ACTN4-208ENST00000497637 LAMP2P13473 410 aa20.67■□□□□ 0.9
ACTN4-208ENST00000497637 RFC1P35251 1148 aaPredicted RBP20.67■□□□□ 0.9
ACTN4-208ENST00000497637 LHX1P48742 406 aa20.67■□□□□ 0.9
ACTN4-208ENST00000497637 RPL34P49207 117 aaKnown RBP20.67■□□□□ 0.9
ACTN4-208ENST00000497637 CLCNKBP51801 687 aa20.67■□□□□ 0.9
ACTN4-208ENST00000497637 BCAT1P54687 386 aa20.67■□□□□ 0.9
ACTN4-208ENST00000497637 PDE4CQ08493 712 aa20.67■□□□□ 0.9
ACTN4-208ENST00000497637 BST2Q10589 180 aaKnown RBP20.67■□□□□ 0.9
ACTN4-208ENST00000497637 TUSC3Q13454 348 aa20.67■□□□□ 0.9
ACTN4-208ENST00000497637 CYP1B1Q16678 543 aa20.67■□□□□ 0.9
ACTN4-208ENST00000497637 UPP1Q16831 310 aa20.67■□□□□ 0.9
ACTN4-208ENST00000497637 DSTYKQ6XUX3 929 aa20.67■□□□□ 0.9
ACTN4-208ENST00000497637 EXD1Q8NHP7 514 aa20.67■□□□□ 0.9
ACTN4-208ENST00000497637 NELL1Q92832 810 aa20.67■□□□□ 0.9
ACTN4-208ENST00000497637 MYADMQ96S97 322 aa20.67■□□□□ 0.9
ACTN4-208ENST00000497637 HNRNPABQ99729 332 aaKnown RBP20.67■□□□□ 0.9
ACTN4-208ENST00000497637 MRPL17Q9NRX2 175 aaKnown RBP20.67■□□□□ 0.9
ACTN4-208ENST00000497637 RALYQ9UKM9 306 aaKnown RBP20.67■□□□□ 0.9
ACTN4-208ENST00000497637 ZFP37Q9Y6Q3 630 aaPredicted RBP20.67■□□□□ 0.9
ACTN4-208ENST00000497637 CNOT1A5YKK6 2376 aaKnown RBP20.67■□□□□ 0.9
ACTN4-208ENST00000497637 CEP295Q9C0D2 2601 aa20.66■□□□□ 0.9
ACTN4-208ENST00000497637 F8VP50 259 aa20.66■□□□□ 0.9
ACTN4-208ENST00000497637 LRP3O75074 770 aa20.66■□□□□ 0.9
ACTN4-208ENST00000497637 ZMYND10O75800 440 aa20.66■□□□□ 0.9
ACTN4-208ENST00000497637 GALTP07902 379 aa20.66■□□□□ 0.9
ACTN4-208ENST00000497637 GLI1P08151 1106 aa20.66■□□□□ 0.9
ACTN4-208ENST00000497637 PTPN1P18031 435 aaKnown RBP20.66■□□□□ 0.9
ACTN4-208ENST00000497637 IGFBP6P24592 240 aaPredicted RBP20.66■□□□□ 0.9
ACTN4-208ENST00000497637 PSMA2P25787 234 aa20.66■□□□□ 0.9
ACTN4-208ENST00000497637 MRPS25P82663 173 aaKnown RBP20.66■□□□□ 0.9
ACTN4-208ENST00000497637 PRKCQQ04759 706 aa20.66■□□□□ 0.9
ACTN4-208ENST00000497637 OR6B2Q6IFH4 312 aa20.66■□□□□ 0.9
ACTN4-208ENST00000497637 PMF1Q6P1K2 205 aa20.66■□□□□ 0.9
ACTN4-208ENST00000497637 MAATS1Q7Z4T9 603 aa20.66■□□□□ 0.9
ACTN4-208ENST00000497637 ZDHHC17Q8IUH5 632 aa20.66■□□□□ 0.9
ACTN4-208ENST00000497637 RCOR2Q8IZ40 523 aa20.66■□□□□ 0.9
ACTN4-208ENST00000497637 B3GALNT2Q8NCR0 500 aa20.66■□□□□ 0.9
ACTN4-208ENST00000497637 LPIN3Q9BQK8 851 aa20.66■□□□□ 0.9
ACTN4-208ENST00000497637 DDX23Q9BUQ8 820 aaKnown RBP20.66■□□□□ 0.9
ACTN4-208ENST00000497637 DDX47Q9H0S4 455 aaKnown RBP20.66■□□□□ 0.9
ACTN4-208ENST00000497637 MAN1C1Q9NR34 630 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms