RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 KRT10P13645 584 aa3.89□□□□□ -1.79
PHC3-216ENST00000497171 IL1R1P14778 569 aa3.89□□□□□ -1.79
PHC3-216ENST00000497171 BTF3P20290 206 aaKnown RBP3.89□□□□□ -1.79
PHC3-216ENST00000497171 YY1P25490 414 aa3.89□□□□□ -1.79
PHC3-216ENST00000497171 ACVR2AP27037 513 aa3.89□□□□□ -1.79
PHC3-216ENST00000497171 IL6STP40189 918 aaPredicted RBP3.89□□□□□ -1.79
PHC3-216ENST00000497171 TOB1P50616 345 aaPredicted RBP3.89□□□□□ -1.79
PHC3-216ENST00000497171 WNT3P56703 355 aa3.89□□□□□ -1.79
PHC3-216ENST00000497171 ARHGEF7Q14155 803 aa3.89□□□□□ -1.79
PHC3-216ENST00000497171 ERV3-1Q14264 604 aa3.89□□□□□ -1.79
PHC3-216ENST00000497171 INSCQ1MX18 579 aa3.89□□□□□ -1.79
PHC3-216ENST00000497171 MPEG1Q2M385 716 aa3.89□□□□□ -1.79
PHC3-216ENST00000497171 FAM83BQ5T0W9 1011 aa3.89□□□□□ -1.79
PHC3-216ENST00000497171 ARHGAP40Q5TG30 622 aa3.89□□□□□ -1.79
PHC3-216ENST00000497171 LVRNQ6Q4G3 990 aa3.89□□□□□ -1.79
PHC3-216ENST00000497171 TMPRSS9Q7Z410 1059 aa3.89□□□□□ -1.79
PHC3-216ENST00000497171 ANKRD42Q8N9B4 389 aa3.89□□□□□ -1.79
PHC3-216ENST00000497171 C16orf52Q8NHV5 167 aa3.89□□□□□ -1.79
PHC3-216ENST00000497171 POC1BQ8TC44 478 aa3.89□□□□□ -1.79
PHC3-216ENST00000497171 FAM136AQ96C01 138 aa3.89□□□□□ -1.79
PHC3-216ENST00000497171 LRIG1Q96JA1 1093 aa3.89□□□□□ -1.79
PHC3-216ENST00000497171 COLEC11Q9BWP8 271 aa3.89□□□□□ -1.79
PHC3-216ENST00000497171 MAGEB5Q9BZ81 275 aa3.89□□□□□ -1.79
PHC3-216ENST00000497171 HIPK2Q9H2X6 1198 aa3.89□□□□□ -1.79
PHC3-216ENST00000497171 HEYLQ9NQ87 328 aaPredicted RBP3.89□□□□□ -1.79
PHC3-216ENST00000497171 MRPS17Q9Y2R5 130 aaKnown RBP3.89□□□□□ -1.79
PHC3-216ENST00000497171 A0A087WV62 115 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 EME2A4GXA9 379 aaPredicted RBP3.88□□□□□ -1.79
PHC3-216ENST00000497171 CD8B2A6NJW9 211 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 H0YIZ8 118 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 FFAR2O15552 330 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 PIAS2O75928 621 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 INMTO95050 263 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 JUPP14923 745 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 PCSK6P29122 969 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 CD6P30203 668 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 LRPAP1P30533 357 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 CYP2C18P33260 490 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 CHKAP35790 457 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 PTDSS1P48651 473 aaKnown RBP3.88□□□□□ -1.79
PHC3-216ENST00000497171 CPT1AP50416 773 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 LOXL3P58215 753 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 ICA1Q05084 483 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 PUM3Q15397 648 aaKnown RBP3.88□□□□□ -1.79
PHC3-216ENST00000497171 RBMS2Q15434 407 aaKnown RBP3.88□□□□□ -1.79
PHC3-216ENST00000497171 PDCD2Q16342 344 aaPredicted RBP3.88□□□□□ -1.79
PHC3-216ENST00000497171 CCDC38Q502W7 563 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 ERAP2Q6P179 960 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 PGBD2Q6P3X8 592 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 TRIM72Q6ZMU5 477 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 KCTD20Q7Z5Y7 419 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 CHSY1Q86X52 802 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 SPARTQ8N0X7 666 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.88□□□□□ -1.79
PHC3-216ENST00000497171 CCT6BQ92526 530 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 TRIM63Q969Q1 353 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 PPP2R3CQ969Q6 453 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 LTV1Q96GA3 475 aaPredicted RBP3.88□□□□□ -1.79
PHC3-216ENST00000497171 VCPIP1Q96JH7 1222 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 ZC3H10Q96K80 434 aaKnown RBP3.88□□□□□ -1.79
PHC3-216ENST00000497171 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.88□□□□□ -1.79
PHC3-216ENST00000497171 AS3MTQ9HBK9 375 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 KLHL13Q9P2N7 655 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 SLC39A10Q9ULF5 831 aa3.88□□□□□ -1.79
PHC3-216ENST00000497171 hCG_1642624A0A1W2PR95 340 aa3.87□□□□□ -1.79
PHC3-216ENST00000497171 FAM234BA2RU67 622 aa3.87□□□□□ -1.79
PHC3-216ENST00000497171 UBE2Q2LH0YL09 131 aa3.87□□□□□ -1.79
PHC3-216ENST00000497171 DSCR3O14972 297 aa3.87□□□□□ -1.79
PHC3-216ENST00000497171 IDEP14735 1019 aa3.87□□□□□ -1.79
PHC3-216ENST00000497171 HALP42357 657 aa3.87□□□□□ -1.79
PHC3-216ENST00000497171 PPM1FP49593 454 aaPredicted RBP3.87□□□□□ -1.79
PHC3-216ENST00000497171 HTR6P50406 440 aa3.87□□□□□ -1.79
PHC3-216ENST00000497171 TCF15Q12870 199 aa3.87□□□□□ -1.79
PHC3-216ENST00000497171 E2F2Q14209 437 aa3.87□□□□□ -1.79
PHC3-216ENST00000497171 KCNAB1Q14722 419 aa3.87□□□□□ -1.79
PHC3-216ENST00000497171 ZIK1Q3SY52 487 aaPredicted RBP3.87□□□□□ -1.79
PHC3-216ENST00000497171 RBM20Q5T481 1227 aaKnown RBP3.87□□□□□ -1.79
PHC3-216ENST00000497171 RGS7BPQ6MZT1 257 aaPredicted RBP3.87□□□□□ -1.79
PHC3-216ENST00000497171 CRTC1Q6UUV9 634 aa3.87□□□□□ -1.79
PHC3-216ENST00000497171 NAPRTQ6XQN6 538 aa3.87□□□□□ -1.79
PHC3-216ENST00000497171 GAS2L3Q86XJ1 694 aa3.87□□□□□ -1.79
PHC3-216ENST00000497171 MYCT1Q8N699 235 aa3.87□□□□□ -1.79
PHC3-216ENST00000497171 ATG16L2Q8NAA4 619 aa3.87□□□□□ -1.79
PHC3-216ENST00000497171 BPIFB1Q8TDL5 484 aa3.87□□□□□ -1.79
PHC3-216ENST00000497171 C18orf8Q96DM3 657 aa3.87□□□□□ -1.79
PHC3-216ENST00000497171 DAZAP1Q96EP5 407 aaKnown RBP3.87□□□□□ -1.79
PHC3-216ENST00000497171 TMEM41AQ96HV5 264 aa3.87□□□□□ -1.79
PHC3-216ENST00000497171 MESP1Q9BRJ9 268 aa3.87□□□□□ -1.79
PHC3-216ENST00000497171 AMBRA1Q9C0C7 1298 aa3.87□□□□□ -1.79
PHC3-216ENST00000497171 FOXP1Q9H334 677 aaPredicted RBP3.87□□□□□ -1.79
PHC3-216ENST00000497171 LRFN1Q9P244 771 aa3.87□□□□□ -1.79
PHC3-216ENST00000497171 SERTAD3Q9UJW9 196 aa3.87□□□□□ -1.79
PHC3-216ENST00000497171 ICKQ9UPZ9 632 aa3.87□□□□□ -1.79
PHC3-216ENST00000497171 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.87□□□□□ -1.79
PHC3-216ENST00000497171 MORC2Q9Y6X9 1032 aaPredicted RBP3.87□□□□□ -1.79
PHC3-216ENST00000497171 H3BNX3 289 aa3.86□□□□□ -1.79
PHC3-216ENST00000497171 HNRNPDLO14979 420 aaKnown RBP3.86□□□□□ -1.79
PHC3-216ENST00000497171 PIP5K1BO14986 540 aa3.86□□□□□ -1.79
PHC3-216ENST00000497171 AREL1O15033 823 aa3.86□□□□□ -1.79
PHC3-216ENST00000497171 NPHP1O15259 732 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms