RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 SEMA4DQ92854 862 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 RMND5BQ96G75 393 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-215ENST00000497139 ZNF597Q96LX8 424 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 HEPHQ9BQS7 1158 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 TDRD1Q9BXT4 1180 aaKnown RBP13.43□□□□□ -0.26
VEGFA-215ENST00000497139 PAIP1Q9H074 479 aaKnown RBP13.43□□□□□ -0.26
VEGFA-215ENST00000497139 ATAD3AQ9NVI7 634 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 XPO7Q9UIA9 1087 aaKnown RBP13.43□□□□□ -0.26
VEGFA-215ENST00000497139 ZNRF3Q9ULT6 936 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 TEX264Q9Y6I9 313 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.42□□□□□ -0.26
VEGFA-215ENST00000497139 K7ENM7 598 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 SORBS2O94875 1100 aaKnown RBP13.42□□□□□ -0.26
VEGFA-215ENST00000497139 FUCA1P04066 466 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 INHBBP09529 407 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 COX4I1P13073 169 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 MOGQ16653 247 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 KCTD21Q4G0X4 260 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 SNRNP48Q6IEG0 339 aaKnown RBP13.42□□□□□ -0.26
VEGFA-215ENST00000497139 USP37Q86T82 979 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 TRIM50Q86XT4 487 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 USP6NLQ92738 828 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 DOK1Q99704 481 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 HGH1Q9BTY7 390 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 IFT122Q9HBG6 1241 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 PARVAQ9NVD7 372 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 GID8Q9NWU2 228 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 AP4S1Q9Y587 144 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 FOCADQ5VW36 1801 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 CCDC195A0A1B0GUA6 201 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 RFPL1O75677 317 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 SULT1C4O75897 302 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 KRT5P13647 590 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 RXRGP48443 463 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 SLC5A3P53794 718 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 MTMR2Q13614 643 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 FLOT2Q14254 428 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 AOC3Q16853 763 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 METTL21CQ5VZV1 264 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 FRMD7Q6ZUT3 714 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 TPH2Q8IWU9 490 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 FEZF2Q8TBJ5 459 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 CPA5Q8WXQ8 436 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 THAP11Q96EK4 314 aa13.42□□□□□ -0.26
VEGFA-215ENST00000497139 ZMAT2Q96NC0 199 aaKnown RBP13.42□□□□□ -0.26
VEGFA-215ENST00000497139 CLK4Q9HAZ1 481 aaKnown RBP13.42□□□□□ -0.26
VEGFA-215ENST00000497139 A0A087WXM4 84 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 KBTBD13C9JR72 458 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 C6orf229H3BNL8 230 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 K7EPI3 171 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 TLR3O15455 904 aaKnown RBP13.41□□□□□ -0.26
VEGFA-215ENST00000497139 GYS1P13807 737 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 GJC1P36383 396 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 ELK3P41970 407 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 CDKN2BP42772 138 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 QRICH1Q2TAL8 776 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 PPP1R14CQ8TAE6 165 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 TMC2Q8TDI7 906 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 DHRS1Q96LJ7 313 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 APOL6Q9BWW8 343 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 C20orf27Q9GZN8 174 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 ST6GALNAC4Q9H4F1 302 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 PCIF1Q9H4Z3 704 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 USTQ9Y2C2 406 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 DNAJC16Q9Y2G8 782 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 RNF11Q9Y3C5 154 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 TAF1P21675 1872 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 ARHGEF37A1IGU5 675 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 TRIM64BA6NI03 449 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 FAM155AB1AL88 458 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-215ENST00000497139 TMEM63AO94886 807 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 P4HBP07237 508 aaKnown RBP13.41□□□□□ -0.26
VEGFA-215ENST00000497139 CYP2C9P11712 490 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 PTPN2P17706 415 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 PAX3P23760 479 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 GRK2P25098 689 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 RPL22P35268 128 aaKnown RBP13.41□□□□□ -0.26
VEGFA-215ENST00000497139 BTDP43251 543 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 IDH3AP50213 366 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 SERPINB9P50453 376 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 NLRP11P59045 1033 aaKnown RBP13.41□□□□□ -0.26
VEGFA-215ENST00000497139 RPS8P62241 208 aaKnown RBP13.41□□□□□ -0.26
VEGFA-215ENST00000497139 GAD2Q05329 585 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 ITPK1Q13572 414 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 ACAP1Q15027 740 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 CYTH1Q15438 398 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 TTBK2Q6IQ55 1244 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 RSPH3Q86UC2 560 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 CELF1Q92879 486 aaKnown RBP13.41□□□□□ -0.26
VEGFA-215ENST00000497139 TMIGD2Q96BF3 282 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 C12orf43Q96C57 262 aaKnown RBP13.41□□□□□ -0.26
VEGFA-215ENST00000497139 CSRNP1Q96S65 589 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 LIN28AQ9H9Z2 209 aaKnown RBP13.41□□□□□ -0.26
VEGFA-215ENST00000497139 SLC30A1Q9Y6M5 507 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 MYOCOSA0A1B0GUC4 107 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 PI4K2BG5E9Z4 385 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 SLC22A2O15244 555 aa13.41□□□□□ -0.26
VEGFA-215ENST00000497139 ZBTB11O95625 1053 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-215ENST00000497139 OXSR1O95747 527 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-215ENST00000497139 C1QAP02745 245 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms