RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 ST13P5Q8NFI4 369 aaPredicted RBP16.56■□□□□ 0.24
PMF1-205ENST00000497069 FGF14Q92915 247 aa16.56■□□□□ 0.24
PMF1-205ENST00000497069 USP13Q92995 863 aaPredicted RBP16.56■□□□□ 0.24
PMF1-205ENST00000497069 KXD1Q9BQD3 176 aa16.56■□□□□ 0.24
PMF1-205ENST00000497069 KCNK12Q9HB15 430 aa16.56■□□□□ 0.24
PMF1-205ENST00000497069 OBP2AQ9NY56 170 aa16.56■□□□□ 0.24
PMF1-205ENST00000497069 MARCH2Q9P0N8 246 aa16.56■□□□□ 0.24
PMF1-205ENST00000497069 NAALADL1Q9UQQ1 740 aa16.56■□□□□ 0.24
PMF1-205ENST00000497069 NUMBLQ9Y6R0 609 aa16.56■□□□□ 0.24
PMF1-205ENST00000497069 C19orf67A6NJJ6 358 aa16.55■□□□□ 0.24
PMF1-205ENST00000497069 HEPACAM2A8MVW5 462 aa16.55■□□□□ 0.24
PMF1-205ENST00000497069 ANHXE9PGG2 379 aa16.55■□□□□ 0.24
PMF1-205ENST00000497069 MDM4O15151 490 aa16.55■□□□□ 0.24
PMF1-205ENST00000497069 KRT3P12035 628 aa16.55■□□□□ 0.24
PMF1-205ENST00000497069 FCARP24071 287 aa16.55■□□□□ 0.24
PMF1-205ENST00000497069 NOS2P35228 1153 aa16.55■□□□□ 0.24
PMF1-205ENST00000497069 GSCP56915 257 aaPredicted RBP16.55■□□□□ 0.24
PMF1-205ENST00000497069 COG7P83436 770 aa16.55■□□□□ 0.24
PMF1-205ENST00000497069 ASTE1Q2TB18 679 aaPredicted RBP16.55■□□□□ 0.24
PMF1-205ENST00000497069 DEFB106AQ8N104 65 aa16.55■□□□□ 0.24
PMF1-205ENST00000497069 GJD3Q8N144 294 aa16.55■□□□□ 0.24
PMF1-205ENST00000497069 C3orf20Q8ND61 904 aa16.55■□□□□ 0.24
PMF1-205ENST00000497069 ADAMTS19Q8TE59 1207 aa16.55■□□□□ 0.24
PMF1-205ENST00000497069 SH3RF2Q8TEC5 729 aa16.55■□□□□ 0.24
PMF1-205ENST00000497069 ZNF653Q96CK0 615 aa16.55■□□□□ 0.24
PMF1-205ENST00000497069 SLC2A13Q96QE2 648 aa16.55■□□□□ 0.24
PMF1-205ENST00000497069 BAG1Q99933 345 aaPredicted RBP16.55■□□□□ 0.24
PMF1-205ENST00000497069 METTL5Q9NRN9 209 aaKnown RBP16.55■□□□□ 0.24
PMF1-205ENST00000497069 PARVAQ9NVD7 372 aa16.55■□□□□ 0.24
PMF1-205ENST00000497069 THG1LQ9NWX6 298 aaKnown RBP16.55■□□□□ 0.24
PMF1-205ENST00000497069 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.55■□□□□ 0.24
PMF1-205ENST00000497069 STAP1Q9ULZ2 295 aa16.55■□□□□ 0.24
PMF1-205ENST00000497069 CCL26Q9Y258 94 aa16.55■□□□□ 0.24
PMF1-205ENST00000497069 DOCK6Q96HP0 2047 aa16.54■□□□□ 0.24
PMF1-205ENST00000497069 SLC12A8A0AV02 714 aa16.54■□□□□ 0.24
PMF1-205ENST00000497069 LEFTY2O00292 366 aa16.54■□□□□ 0.24
PMF1-205ENST00000497069 IPO7O95373 1038 aaKnown RBP16.54■□□□□ 0.24
PMF1-205ENST00000497069 FYNP06241 537 aa16.54■□□□□ 0.24
PMF1-205ENST00000497069 IRF1P10914 325 aa16.54■□□□□ 0.24
PMF1-205ENST00000497069 ABCB4P21439 1286 aa16.54■□□□□ 0.24
PMF1-205ENST00000497069 RRM1P23921 792 aa16.54■□□□□ 0.24
PMF1-205ENST00000497069 GBP1P32455 592 aa16.54■□□□□ 0.24
PMF1-205ENST00000497069 KPNA1P52294 538 aaPredicted RBP16.54■□□□□ 0.24
PMF1-205ENST00000497069 CC2D1AQ6P1N0 951 aaPredicted RBP16.54■□□□□ 0.24
PMF1-205ENST00000497069 MSANTD2Q6P1R3 559 aa16.54■□□□□ 0.24
PMF1-205ENST00000497069 DCUN1D2Q6PH85 259 aa16.54■□□□□ 0.24
PMF1-205ENST00000497069 DNAAF5Q86Y56 855 aa16.54■□□□□ 0.24
PMF1-205ENST00000497069 BPIFB1Q8TDL5 484 aa16.54■□□□□ 0.24
PMF1-205ENST00000497069 DEPDC1BQ8WUY9 529 aa16.54■□□□□ 0.24
PMF1-205ENST00000497069 RSAD2Q8WXG1 361 aa16.54■□□□□ 0.24
PMF1-205ENST00000497069 SERPINB11Q96P15 392 aa16.54■□□□□ 0.24
PMF1-205ENST00000497069 UHRF1Q96T88 793 aaPredicted RBP16.54■□□□□ 0.24
PMF1-205ENST00000497069 LUC7LQ9NQ29 371 aaKnown RBP16.54■□□□□ 0.24
PMF1-205ENST00000497069 GKN1Q9NS71 199 aa16.54■□□□□ 0.24
PMF1-205ENST00000497069 SPTLC3Q9NUV7 552 aa16.54■□□□□ 0.24
PMF1-205ENST00000497069 RRN3Q9NYV6 651 aa16.54■□□□□ 0.24
PMF1-205ENST00000497069 CFAP97Q9P2B7 532 aa16.54■□□□□ 0.24
PMF1-205ENST00000497069 CNOT8Q9UFF9 292 aaKnown RBP16.54■□□□□ 0.24
PMF1-205ENST00000497069 LSM7Q9UK45 103 aaKnown RBP16.54■□□□□ 0.24
PMF1-205ENST00000497069 SH3BP1Q9Y3L3 701 aa16.54■□□□□ 0.24
PMF1-205ENST00000497069 HBS1LQ9Y450 684 aaKnown RBP16.54■□□□□ 0.24
PMF1-205ENST00000497069 SCINQ9Y6U3 715 aa16.54■□□□□ 0.24
PMF1-205ENST00000497069 ZNF638Q14966 1978 aaKnown RBP16.54■□□□□ 0.24
PMF1-205ENST00000497069 NRDCO43847 1150 aa16.53■□□□□ 0.24
PMF1-205ENST00000497069 ASGR2P07307 311 aa16.53■□□□□ 0.24
PMF1-205ENST00000497069 HMBSP08397 361 aa16.53■□□□□ 0.24
PMF1-205ENST00000497069 H2AFZP0C0S5 128 aa16.53■□□□□ 0.24
PMF1-205ENST00000497069 TCF3P15923 654 aa16.53■□□□□ 0.24
PMF1-205ENST00000497069 DESP17661 470 aa16.53■□□□□ 0.24
PMF1-205ENST00000497069 PSMC3P17980 439 aa16.53■□□□□ 0.24
PMF1-205ENST00000497069 MATKP42679 507 aa16.53■□□□□ 0.24
PMF1-205ENST00000497069 GPC5P78333 572 aa16.53■□□□□ 0.24
PMF1-205ENST00000497069 SPA17Q15506 151 aa16.53■□□□□ 0.24
PMF1-205ENST00000497069 C10orf76Q5T2E6 689 aa16.53■□□□□ 0.24
PMF1-205ENST00000497069 SYPL2Q5VXT5 272 aa16.53■□□□□ 0.24
PMF1-205ENST00000497069 VITQ6UXI7 678 aa16.53■□□□□ 0.24
PMF1-205ENST00000497069 H2AFVQ71UI9 128 aa16.53■□□□□ 0.24
PMF1-205ENST00000497069 ARCQ7LC44 396 aa16.53■□□□□ 0.24
PMF1-205ENST00000497069 MFSD6LQ8IWD5 586 aa16.53■□□□□ 0.24
PMF1-205ENST00000497069 DQX1Q8TE96 717 aaKnown RBP16.53■□□□□ 0.24
PMF1-205ENST00000497069 CTNNBL1Q8WYA6 563 aaPredicted RBP16.53■□□□□ 0.24
PMF1-205ENST00000497069 KHSRPQ92945 711 aaKnown RBP eCLIP16.53■□□□□ 0.24
PMF1-205ENST00000497069 TRMT61BQ9BVS5 477 aaKnown RBP16.53■□□□□ 0.24
PMF1-205ENST00000497069 KLF16Q9BXK1 252 aaPredicted RBP16.53■□□□□ 0.24
PMF1-205ENST00000497069 SMOC2Q9H3U7 446 aa16.53■□□□□ 0.24
PMF1-205ENST00000497069 FAM204AQ9H8W3 233 aa16.53■□□□□ 0.24
PMF1-205ENST00000497069 MRPL47Q9HD33 250 aaKnown RBP16.53■□□□□ 0.24
PMF1-205ENST00000497069 MYO1AQ9UBC5 1043 aa16.53■□□□□ 0.24
PMF1-205ENST00000497069 SFMBT1Q9UHJ3 866 aa16.53■□□□□ 0.24
PMF1-205ENST00000497069 TMEM59LQ9UK28 342 aa16.53■□□□□ 0.24
PMF1-205ENST00000497069 C5orf42Q9H799 3197 aa16.53■□□□□ 0.24
PMF1-205ENST00000497069 OBSL1O75147 1896 aa16.52■□□□□ 0.24
PMF1-205ENST00000497069 SIGLEC16A6NMB1 481 aa16.52■□□□□ 0.24
PMF1-205ENST00000497069 ATMINO43313 823 aaPredicted RBP16.52■□□□□ 0.24
PMF1-205ENST00000497069 TRUB2O95900 331 aaKnown RBP16.52■□□□□ 0.24
PMF1-205ENST00000497069 FECHP22830 423 aa16.52■□□□□ 0.24
PMF1-205ENST00000497069 SULT1E1P49888 294 aa16.52■□□□□ 0.24
PMF1-205ENST00000497069 TBX4P57082 545 aa16.52■□□□□ 0.24
PMF1-205ENST00000497069 USP4Q13107 963 aa16.52■□□□□ 0.24
PMF1-205ENST00000497069 GRM2Q14416 872 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms