RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 FSTL5Q8N475 847 aaPredicted RBP6.35□□□□□ -1.39
MDM2-220ENST00000496959 ZNF366Q8N895 744 aa6.35□□□□□ -1.39
MDM2-220ENST00000496959 FAM71DQ8N9W8 422 aa6.35□□□□□ -1.39
MDM2-220ENST00000496959 APOL5Q9BWW9 433 aa6.35□□□□□ -1.39
MDM2-220ENST00000496959 USP29Q9HBJ7 922 aa6.35□□□□□ -1.39
MDM2-220ENST00000496959 TRNAU1APQ9NX07 287 aaKnown RBP6.35□□□□□ -1.39
MDM2-220ENST00000496959 VPS51Q9UID3 782 aa6.35□□□□□ -1.39
MDM2-220ENST00000496959 ASAP1Q9ULH1 1129 aa6.35□□□□□ -1.39
MDM2-220ENST00000496959 RHPN2P1A8MT19 583 aa6.34□□□□□ -1.39
MDM2-220ENST00000496959 F8W8V4 182 aa6.34□□□□□ -1.39
MDM2-220ENST00000496959 CLIC1O00299 241 aa6.34□□□□□ -1.39
MDM2-220ENST00000496959 IL18RAPO95256 599 aa6.34□□□□□ -1.39
MDM2-220ENST00000496959 TMEM225BP0DP42 221 aa6.34□□□□□ -1.39
MDM2-220ENST00000496959 DAG1Q14118 895 aa6.34□□□□□ -1.39
MDM2-220ENST00000496959 ANO7Q6IWH7 933 aa6.34□□□□□ -1.39
MDM2-220ENST00000496959 DGKHQ86XP1 1220 aa6.34□□□□□ -1.39
MDM2-220ENST00000496959 LIX1LQ8IVB5 337 aa6.34□□□□□ -1.39
MDM2-220ENST00000496959 NANOGP1Q8N7R0 232 aa6.34□□□□□ -1.39
MDM2-220ENST00000496959 MAP4K1Q92918 833 aa6.34□□□□□ -1.39
MDM2-220ENST00000496959 IQCDQ96DY2 449 aa6.34□□□□□ -1.39
MDM2-220ENST00000496959 EDC3Q96F86 508 aaKnown RBP6.34□□□□□ -1.39
MDM2-220ENST00000496959 FAM227BQ96M60 508 aa6.34□□□□□ -1.39
MDM2-220ENST00000496959 ZNF48Q96MX3 618 aaPredicted RBP6.34□□□□□ -1.39
MDM2-220ENST00000496959 CINPQ9BW66 212 aaPredicted RBP6.34□□□□□ -1.39
MDM2-220ENST00000496959 HEYLQ9NQ87 328 aaPredicted RBP6.34□□□□□ -1.39
MDM2-220ENST00000496959 KLHL42Q9P2K6 505 aa6.34□□□□□ -1.39
MDM2-220ENST00000496959 CORO2BQ9UQ03 480 aa6.34□□□□□ -1.39
MDM2-220ENST00000496959 WDR97A6NE52 1622 aa6.34□□□□□ -1.39
MDM2-220ENST00000496959 EIF4G3O43432 1585 aaKnown RBP6.33□□□□□ -1.4
MDM2-220ENST00000496959 PQBP1O60828 265 aaKnown RBP6.33□□□□□ -1.4
MDM2-220ENST00000496959 FGBP02675 491 aa6.33□□□□□ -1.4
MDM2-220ENST00000496959 ATF7P17544 494 aaPredicted RBP6.33□□□□□ -1.4
MDM2-220ENST00000496959 COPAP53621 1224 aa6.33□□□□□ -1.4
MDM2-220ENST00000496959 HTRA4P83105 476 aaPredicted RBP6.33□□□□□ -1.4
MDM2-220ENST00000496959 LAMB3Q13751 1172 aa6.33□□□□□ -1.4
MDM2-220ENST00000496959 MRPL10Q7Z7H8 261 aaKnown RBP6.33□□□□□ -1.4
MDM2-220ENST00000496959 P3H2Q8IVL5 708 aa6.33□□□□□ -1.4
MDM2-220ENST00000496959 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.33□□□□□ -1.4
MDM2-220ENST00000496959 TIFAQ96CG3 184 aa6.33□□□□□ -1.4
MDM2-220ENST00000496959 HMCESQ96FZ2 354 aa6.33□□□□□ -1.4
MDM2-220ENST00000496959 HIC2Q96JB3 615 aa6.33□□□□□ -1.4
MDM2-220ENST00000496959 ZC3H10Q96K80 434 aaKnown RBP6.33□□□□□ -1.4
MDM2-220ENST00000496959 SELENOOQ9BVL4 669 aa6.33□□□□□ -1.4
MDM2-220ENST00000496959 SLC25A32Q9H2D1 315 aa6.33□□□□□ -1.4
MDM2-220ENST00000496959 FZD4Q9ULV1 537 aa6.33□□□□□ -1.4
MDM2-220ENST00000496959 RSF1Q96T23 1441 aaPredicted RBP6.33□□□□□ -1.4
MDM2-220ENST00000496959 COL15A1P39059 1388 aa6.32□□□□□ -1.4
MDM2-220ENST00000496959 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.32□□□□□ -1.4
MDM2-220ENST00000496959 FYB1O15117 783 aa6.32□□□□□ -1.4
MDM2-220ENST00000496959 YY1P25490 414 aa6.32□□□□□ -1.4
MDM2-220ENST00000496959 NR4A2P43354 598 aa6.32□□□□□ -1.4
MDM2-220ENST00000496959 CCDC15Q0P6D6 951 aa6.32□□□□□ -1.4
MDM2-220ENST00000496959 PFKFB3Q16875 520 aaPredicted RBP6.32□□□□□ -1.4
MDM2-220ENST00000496959 TMTC4Q5T4D3 741 aa6.32□□□□□ -1.4
MDM2-220ENST00000496959 SHC4Q6S5L8 630 aa6.32□□□□□ -1.4
MDM2-220ENST00000496959 KRT28Q7Z3Y7 464 aa6.32□□□□□ -1.4
MDM2-220ENST00000496959 KRT73Q86Y46 540 aa6.32□□□□□ -1.4
MDM2-220ENST00000496959 C16orf52Q8NHV5 167 aa6.32□□□□□ -1.4
MDM2-220ENST00000496959 MBD3L2Q8NHZ7 208 aaPredicted RBP6.32□□□□□ -1.4
MDM2-220ENST00000496959 DDX21Q9NR30 783 aaKnown RBP eCLIP6.32□□□□□ -1.4
MDM2-220ENST00000496959 CHD1O14646 1710 aa6.32□□□□□ -1.4
MDM2-220ENST00000496959 DNMBPQ6XZF7 1577 aa6.31□□□□□ -1.4
MDM2-220ENST00000496959 WDR47O94967 919 aa6.31□□□□□ -1.4
MDM2-220ENST00000496959 GPC5P78333 572 aa6.31□□□□□ -1.4
MDM2-220ENST00000496959 RRAGBQ5VZM2 374 aa6.31□□□□□ -1.4
MDM2-220ENST00000496959 ATP11CQ8NB49 1132 aa6.31□□□□□ -1.4
MDM2-220ENST00000496959 ZBTB9Q96C00 473 aa6.31□□□□□ -1.4
MDM2-220ENST00000496959 COQ8BQ96D53 544 aa6.31□□□□□ -1.4
MDM2-220ENST00000496959 TOPBP1Q92547 1522 aa6.3□□□□□ -1.4
MDM2-220ENST00000496959 SOCS2O14508 198 aa6.3□□□□□ -1.4
MDM2-220ENST00000496959 PPM1GO15355 546 aaPredicted RBP6.3□□□□□ -1.4
MDM2-220ENST00000496959 CA12O43570 354 aa6.3□□□□□ -1.4
MDM2-220ENST00000496959 TACR3P29371 465 aa6.3□□□□□ -1.4
MDM2-220ENST00000496959 HTR7P34969 479 aa6.3□□□□□ -1.4
MDM2-220ENST00000496959 CCT4P50991 539 aaKnown RBP6.3□□□□□ -1.4
MDM2-220ENST00000496959 DGKQP52824 942 aa6.3□□□□□ -1.4
MDM2-220ENST00000496959 ZNF91Q05481 1191 aa6.3□□□□□ -1.4
MDM2-220ENST00000496959 SLC14A1Q13336 389 aa6.3□□□□□ -1.4
MDM2-220ENST00000496959 KAZALD1Q96I82 304 aa6.3□□□□□ -1.4
MDM2-220ENST00000496959 SIGLEC11Q96RL6 698 aa6.3□□□□□ -1.4
MDM2-220ENST00000496959 ADGRE3Q9BY15 652 aa6.3□□□□□ -1.4
MDM2-220ENST00000496959 ZBTB26Q9HCK0 441 aa6.3□□□□□ -1.4
MDM2-220ENST00000496959 AFG3L2Q9Y4W6 797 aa6.3□□□□□ -1.4
MDM2-220ENST00000496959 ADAM10O14672 748 aa6.29□□□□□ -1.4
MDM2-220ENST00000496959 AREL1O15033 823 aa6.29□□□□□ -1.4
MDM2-220ENST00000496959 CCNT2O60583 730 aaKnown RBP6.29□□□□□ -1.4
MDM2-220ENST00000496959 COQ9O75208 318 aa6.29□□□□□ -1.4
MDM2-220ENST00000496959 TMEM191BP0C7N4 346 aa6.29□□□□□ -1.4
MDM2-220ENST00000496959 ATICP31939 592 aa6.29□□□□□ -1.4
MDM2-220ENST00000496959 PIK3CBP42338 1070 aa6.29□□□□□ -1.4
MDM2-220ENST00000496959 ID2Q02363 134 aa6.29□□□□□ -1.4
MDM2-220ENST00000496959 RBMS2Q15434 407 aaKnown RBP6.29□□□□□ -1.4
MDM2-220ENST00000496959 SEC23BQ15437 767 aa6.29□□□□□ -1.4
MDM2-220ENST00000496959 FAM110CQ1W6H9 321 aa6.29□□□□□ -1.4
MDM2-220ENST00000496959 C10orf25Q5T742 122 aa6.29□□□□□ -1.4
MDM2-220ENST00000496959 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.29□□□□□ -1.4
MDM2-220ENST00000496959 SUN3Q8TAQ9 357 aa6.29□□□□□ -1.4
MDM2-220ENST00000496959 ABHD5Q8WTS1 349 aa6.29□□□□□ -1.4
MDM2-220ENST00000496959 NUAK2Q9H093 628 aa6.29□□□□□ -1.4
MDM2-220ENST00000496959 MTMR4Q9NYA4 1195 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms