RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 RNASELQ05823 741 aaKnown RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 PTK2BQ14289 1009 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 NCAPHQ15003 741 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 TAF12Q16514 161 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 ARL13BQ3SXY8 428 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 CFAP100Q494V2 611 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 RNF219Q5W0B1 726 aaPredicted RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 FAM205BPQ63HN1 556 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 TBC1D9BQ66K14 1250 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 PDPK2PQ6A1A2 396 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 PM20D1Q6GTS8 502 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 METTL2BQ6P1Q9 378 aaKnown RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 FBXO38Q6PIJ6 1188 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 LDHDQ86WU2 507 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 SLC22A9Q8IVM8 553 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 POU5F2Q8N7G0 328 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 CCDC63Q8NA47 563 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 FBXO15Q8NCQ5 510 aaPredicted RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 NSUN7Q8NE18 718 aaKnown RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 OR8K3Q8NH51 312 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 ENKURQ8TC29 256 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 CALML6Q8TD86 181 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 ATL1Q8WXF7 558 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 HSPH1Q92598 858 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 RUBCNQ92622 972 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 TUBGCP3Q96CW5 907 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 ERO1AQ96HE7 468 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 SGCZQ96LD1 299 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 CD244Q9BZW8 370 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 KLHL4Q9C0H6 718 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 GBA3Q9H227 469 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 MRM3Q9HC36 420 aaKnown RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 WASH6PQ9NQA3 447 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 CNGB3Q9NQW8 809 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 INIPQ9NRY2 104 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 EURLQ9NYK6 297 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 HSPBP1Q9NZL4 362 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 CHMP2BQ9UQN3 213 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 COQ6Q9Y2Z9 468 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 PCDHGB6Q9Y5F9 930 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 UHRF1BP1LA0JNW5 1464 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 A0A1B0GVG6 124 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 CCDC78A2IDD5 438 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 ACOD1A6NK06 481 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 H3BQV1 296 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 TXNL1O43396 289 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 FKBP9O95302 570 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 PLGP00747 810 aaPredicted RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 EIF2S1P05198 315 aaKnown RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 SRGAP2CP0DJJ0 459 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 POU2F1P14859 743 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 ALOX12P18054 663 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 HDCP19113 662 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 RFC4P35249 363 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 ATXN1P54253 815 aaKnown RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 PRKCEQ02156 737 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 GRIN1Q05586 938 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 ASPHQ12797 758 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 SMARCB1Q12824 385 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 NCF4Q15080 339 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 NFIL3Q16649 462 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 HSP90AA4PQ58FG1 418 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 MDH1BQ5I0G3 518 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 GRTP1Q5TC63 336 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 HLA-DQA1Q5Y7H0 255 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 KANK2Q63ZY3 851 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 SARM1Q6SZW1 724 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 C3orf62Q6ZUJ4 267 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 RAB11FIP2Q7L804 512 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 GPR142Q7Z601 462 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 EXOC3L1Q86VI1 746 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 SESTD1Q86VW0 696 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 SPPL2CQ8IUH8 684 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 RHOT2Q8IXI1 618 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 TTC5Q8N0Z6 440 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 CNTROBQ8N137 903 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 ANKRD35Q8N283 1001 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 WDR60Q8WVS4 1066 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 ANKS1AQ92625 1134 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 SUCLG2Q96I99 432 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 PWWP2AQ96N64 755 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 TBCBQ99426 244 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 BCL7BQ9BQE9 202 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 SIKE1Q9BRV8 207 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 C9orf16Q9BUW7 83 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 SLC6A17Q9H1V8 727 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 DENND2DQ9H6A0 471 aaPredicted RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 XKR8Q9H6D3 395 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 ZNF552Q9H707 407 aaPredicted RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 RSAD1Q9HA92 442 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 NEK6Q9HC98 313 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 CD320Q9NPF0 282 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 PFDN4Q9NQP4 134 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 CYP26B1Q9NR63 512 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 STK32BQ9NY57 414 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 GGA3Q9NZ52 723 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 IL37Q9NZH6 218 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 SEC63Q9UGP8 760 aaKnown RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 FBXO40Q9UH90 709 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms