RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 PHF7Q9BWX1 381 aaPredicted RBP19.18■□□□□ 0.66
TSSC4-210ENST00000496468 MRPL47Q9HD33 250 aaKnown RBP19.18■□□□□ 0.66
TSSC4-210ENST00000496468 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.18■□□□□ 0.66
TSSC4-210ENST00000496468 NUDT5Q9UKK9 219 aa19.18■□□□□ 0.66
TSSC4-210ENST00000496468 INTUQ9ULD6 942 aa19.18■□□□□ 0.66
TSSC4-210ENST00000496468 NR2E1Q9Y466 385 aa19.18■□□□□ 0.66
TSSC4-210ENST00000496468 PCDHA13Q9Y5I0 950 aa19.18■□□□□ 0.66
TSSC4-210ENST00000496468 ZFP37Q9Y6Q3 630 aaPredicted RBP19.18■□□□□ 0.66
TSSC4-210ENST00000496468 DOCK8Q8NF50 2099 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 SIGLEC16A6NMB1 481 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 MDM4O15151 490 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 CYP1A2P05177 515 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 FYNP06241 537 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 MBL2P11226 248 aaPredicted RBP19.17■□□□□ 0.66
TSSC4-210ENST00000496468 IL9P15248 144 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 ATP5C1P36542 298 aaKnown RBP19.17■□□□□ 0.66
TSSC4-210ENST00000496468 FLT3P36888 993 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 KRT83P78385 493 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 EFEMP1Q12805 493 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 MAMLD1Q13495 774 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 DCAF6Q58WW2 860 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 PPP1R15BQ5SWA1 713 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 ARCQ7LC44 396 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 CMTM8Q8IZV2 173 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 ZNF276Q8N554 614 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 EMC1Q8N766 993 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 JOSD2Q8TAC2 188 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 DQX1Q8TE96 717 aaKnown RBP19.17■□□□□ 0.66
TSSC4-210ENST00000496468 ZSWIM3Q96MP5 696 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 SLC22A12Q96S37 553 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 SLC46A2Q9BY10 475 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 SMOC2Q9H3U7 446 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 FAM204AQ9H8W3 233 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 MARCH2Q9P0N8 246 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 DNMT3LQ9UJW3 386 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 TMEM59LQ9UK28 342 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 STAP1Q9ULZ2 295 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 NAALADL1Q9UQQ1 740 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 USTQ9Y2C2 406 aa19.17■□□□□ 0.66
TSSC4-210ENST00000496468 C5orf42Q9H799 3197 aa19.16■□□□□ 0.66
TSSC4-210ENST00000496468 PRAMEF12O95522 483 aa19.16■□□□□ 0.66
TSSC4-210ENST00000496468 TBX18O95935 607 aa19.16■□□□□ 0.66
TSSC4-210ENST00000496468 HDCP19113 662 aa19.16■□□□□ 0.66
TSSC4-210ENST00000496468 NOS2P35228 1153 aa19.16■□□□□ 0.66
TSSC4-210ENST00000496468 MATKP42679 507 aa19.16■□□□□ 0.66
TSSC4-210ENST00000496468 KIAA1328Q86T90 577 aa19.16■□□□□ 0.66
TSSC4-210ENST00000496468 TAC4Q86UU9 113 aa19.16■□□□□ 0.66
TSSC4-210ENST00000496468 MIB1Q86YT6 1006 aa19.16■□□□□ 0.66
TSSC4-210ENST00000496468 TXLNBQ8N3L3 684 aa19.16■□□□□ 0.66
TSSC4-210ENST00000496468 KHSRPQ92945 711 aaKnown RBP eCLIP19.16■□□□□ 0.66
TSSC4-210ENST00000496468 ASB16Q96NS5 453 aa19.16■□□□□ 0.66
TSSC4-210ENST00000496468 NUP85Q9BW27 656 aa19.16■□□□□ 0.66
TSSC4-210ENST00000496468 KCNF1Q9H3M0 494 aa19.16■□□□□ 0.66
TSSC4-210ENST00000496468 RRN3Q9NYV6 651 aa19.16■□□□□ 0.66
TSSC4-210ENST00000496468 REXO2Q9Y3B8 237 aaKnown RBP19.16■□□□□ 0.66
TSSC4-210ENST00000496468 CPQQ9Y646 472 aa19.16■□□□□ 0.66
TSSC4-210ENST00000496468 C2CD4BA6NLJ0 364 aa19.15■□□□□ 0.66
TSSC4-210ENST00000496468 DESP17661 470 aa19.15■□□□□ 0.66
TSSC4-210ENST00000496468 GPD1P21695 349 aa19.15■□□□□ 0.66
TSSC4-210ENST00000496468 SDC4P31431 198 aa19.15■□□□□ 0.66
TSSC4-210ENST00000496468 SULT1E1P49888 294 aa19.15■□□□□ 0.66
TSSC4-210ENST00000496468 KCNQ1P51787 676 aa19.15■□□□□ 0.66
TSSC4-210ENST00000496468 VAV2P52735 878 aa19.15■□□□□ 0.66
TSSC4-210ENST00000496468 SLC7A9P82251 487 aa19.15■□□□□ 0.66
TSSC4-210ENST00000496468 SYPL2Q5VXT5 272 aa19.15■□□□□ 0.66
TSSC4-210ENST00000496468 TRNP1Q6NT89 227 aa19.15■□□□□ 0.66
TSSC4-210ENST00000496468 ZNF564Q8TBZ8 553 aaPredicted RBP19.15■□□□□ 0.66
TSSC4-210ENST00000496468 RFFLQ8WZ73 363 aa19.15■□□□□ 0.66
TSSC4-210ENST00000496468 SMARCD2Q92925 531 aa19.15■□□□□ 0.66
TSSC4-210ENST00000496468 SERPINB11Q96P15 392 aa19.15■□□□□ 0.66
TSSC4-210ENST00000496468 CYP2S1Q96SQ9 504 aa19.15■□□□□ 0.66
TSSC4-210ENST00000496468 RNF38Q9H0F5 515 aa19.15■□□□□ 0.66
TSSC4-210ENST00000496468 SMG9Q9H0W8 520 aaKnown RBP19.15■□□□□ 0.66
TSSC4-210ENST00000496468 KIF9Q9HAQ2 790 aa19.15■□□□□ 0.66
TSSC4-210ENST00000496468 SMPD4Q9NXE4 827 aa19.15■□□□□ 0.66
TSSC4-210ENST00000496468 CTTNBP2NLQ9P2B4 639 aa19.15■□□□□ 0.66
TSSC4-210ENST00000496468 UVRAGQ9P2Y5 699 aa19.15■□□□□ 0.66
TSSC4-210ENST00000496468 EPS15L1Q9UBC2 864 aa19.15■□□□□ 0.66
TSSC4-210ENST00000496468 ARHGAP26Q9UNA1 814 aa19.15■□□□□ 0.66
TSSC4-210ENST00000496468 C2CD4DB7Z1M9 353 aa19.14■□□□□ 0.65
TSSC4-210ENST00000496468 DPYSL4O14531 572 aa19.14■□□□□ 0.65
TSSC4-210ENST00000496468 MSI1O43347 362 aaKnown RBP19.14■□□□□ 0.65
TSSC4-210ENST00000496468 LAMP2P13473 410 aa19.14■□□□□ 0.65
TSSC4-210ENST00000496468 PDGFRAP16234 1089 aa19.14■□□□□ 0.65
TSSC4-210ENST00000496468 WEE1P30291 646 aa19.14■□□□□ 0.65
TSSC4-210ENST00000496468 RFC1P35251 1148 aaPredicted RBP19.14■□□□□ 0.65
TSSC4-210ENST00000496468 RPL7AP62424 266 aaKnown RBP19.14■□□□□ 0.65
TSSC4-210ENST00000496468 FAM78AQ5JUQ0 283 aa19.14■□□□□ 0.65
TSSC4-210ENST00000496468 POTEHQ6S545 545 aa19.14■□□□□ 0.65
TSSC4-210ENST00000496468 MTSS1LQ765P7 747 aa19.14■□□□□ 0.65
TSSC4-210ENST00000496468 DDX42Q86XP3 938 aaKnown RBP eCLIP19.14■□□□□ 0.65
TSSC4-210ENST00000496468 ARID3BQ8IVW6 561 aaPredicted RBP19.14■□□□□ 0.65
TSSC4-210ENST00000496468 RHOT2Q8IXI1 618 aa19.14■□□□□ 0.65
TSSC4-210ENST00000496468 ADAM32Q8TC27 787 aa19.14■□□□□ 0.65
TSSC4-210ENST00000496468 ATXN2LQ8WWM7 1075 aaKnown RBP19.14■□□□□ 0.65
TSSC4-210ENST00000496468 RXFP2Q8WXD0 754 aa19.14■□□□□ 0.65
TSSC4-210ENST00000496468 RPGRIP1Q96KN7 1286 aa19.14■□□□□ 0.65
TSSC4-210ENST00000496468 CFAP57Q96MR6 1250 aa19.14■□□□□ 0.65
TSSC4-210ENST00000496468 DDX23Q9BUQ8 820 aaKnown RBP19.14■□□□□ 0.65
TSSC4-210ENST00000496468 TDP1Q9NUW8 608 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms