RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 NDC80O14777 642 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 RFPL2O75678 378 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 XPAP23025 273 aaPredicted RBP8.98□□□□□ -0.97
U2AF1-212ENST00000496462 TEAD2Q15562 447 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 MPPE1Q53F39 396 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 TTC39BQ5VTQ0 682 aaPredicted RBP8.98□□□□□ -0.97
U2AF1-212ENST00000496462 TRMT11Q7Z4G4 463 aaKnown RBP8.98□□□□□ -0.97
U2AF1-212ENST00000496462 LRRC8AQ8IWT6 810 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 MNS1Q8NEH6 495 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 GPR152Q8TDT2 470 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 ATXN2LQ8WWM7 1075 aaKnown RBP8.98□□□□□ -0.97
U2AF1-212ENST00000496462 ZNF592Q92610 1267 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 EDEM1Q92611 657 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 ELMO3Q96BJ8 720 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 NELL2Q99435 816 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 SMOQ99835 787 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 SLC4A5Q9BY07 1137 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 C8orf33Q9H7E9 229 aaPredicted RBP8.98□□□□□ -0.97
U2AF1-212ENST00000496462 OBP2AQ9NY56 170 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 FEZ2Q9UHY8 353 aaPredicted RBP8.98□□□□□ -0.97
U2AF1-212ENST00000496462 USP15Q9Y4E8 981 aaPredicted RBP8.98□□□□□ -0.97
U2AF1-212ENST00000496462 CPQQ9Y646 472 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 CHD7Q9P2D1 2997 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 GRAP2O75791 330 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 KRT1P04264 644 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 PNMA6AP0CW24 399 aaPredicted RBP8.98□□□□□ -0.97
U2AF1-212ENST00000496462 CASQ1P31415 396 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 STARD3Q14849 445 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 TRIP4Q15650 581 aaPredicted RBP8.98□□□□□ -0.97
U2AF1-212ENST00000496462 SCML4Q8N228 414 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 LMO3Q8TAP4 145 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 ZSCAN18Q8TBC5 510 aaPredicted RBP8.98□□□□□ -0.97
U2AF1-212ENST00000496462 SLC20A1Q8WUM9 679 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 BCL7CQ8WUZ0 217 aaPredicted RBP8.98□□□□□ -0.97
U2AF1-212ENST00000496462 RXFP2Q8WXD0 754 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 RHOBTB2Q9BYZ6 727 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 DHX35Q9H5Z1 703 aaKnown RBP8.98□□□□□ -0.97
U2AF1-212ENST00000496462 SIX2Q9NPC8 291 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 NCANO14594 1321 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 F8W810 466 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 ATP5BP06576 529 aaKnown RBP8.97□□□□□ -0.97
U2AF1-212ENST00000496462 HNRNPH3P31942 346 aaKnown RBP8.97□□□□□ -0.97
U2AF1-212ENST00000496462 HTR7P34969 479 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 CDR1P51861 262 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 JAM2P57087 298 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 GFPT1Q06210 699 aaPredicted RBP8.97□□□□□ -0.97
U2AF1-212ENST00000496462 LRRC32Q14392 662 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 BEND5Q7L4P6 421 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 SLFN11Q7Z7L1 901 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 PHLDB2Q86SQ0 1253 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 TMEM110Q86TL2 294 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 ARL14EPQ8N8R7 260 aaPredicted RBP8.97□□□□□ -0.97
U2AF1-212ENST00000496462 TMEM209Q96SK2 561 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 SPTLC3Q9NUV7 552 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 E2F8A0AVK6 867 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 APODP05090 189 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 ALADP13716 330 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 MX2P20592 715 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 CA4P22748 312 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 GPD2P43304 727 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 LMAN1P49257 510 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 ZNF132P52740 706 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 GNG11P61952 73 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 CYP4F8P98187 520 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 FMO1Q01740 532 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 LEXMQ3ZCV2 418 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 TTC13Q8NBP0 860 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 BAP1Q92560 729 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 BTN2A3PQ96KV6 586 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 TWNKQ96RR1 684 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 KCNK16Q96T55 309 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 CALN1Q9BXU9 219 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 LZTFL1Q9NQ48 299 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 PLA2G4CQ9UP65 541 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 IRAK2O43187 625 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 LATS1O95835 1130 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 MMP8P22894 467 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 DNA2P51530 1060 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 NNTQ13423 1086 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 PTPN21Q16825 1174 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 C6orf118Q5T5N4 469 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 LILRA6Q6PI73 481 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 TMEM184AQ6ZMB5 413 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 FAM183BPQ6ZVS7 135 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 STRADAQ7RTN6 431 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 ZNF571Q7Z3V5 609 aaPredicted RBP8.97□□□□□ -0.97
U2AF1-212ENST00000496462 METTL3Q86U44 580 aaKnown RBP8.97□□□□□ -0.97
U2AF1-212ENST00000496462 RFX6Q8HWS3 928 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 CRIPAKQ8N1N5 446 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 SH3RF2Q8TEC5 729 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 SLC35F5Q8WV83 523 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 TFAP2BQ92481 460 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 LRRD1A4D1F6 860 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 RNASEH1O60930 286 aaKnown RBP8.97□□□□□ -0.97
U2AF1-212ENST00000496462 SOAT2O75908 522 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 PSMC3P17980 439 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 SP100P23497 879 aaPredicted RBP8.97□□□□□ -0.97
U2AF1-212ENST00000496462 RWDD2BP57060 319 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 CKAP4Q07065 602 aaKnown RBP8.97□□□□□ -0.97
U2AF1-212ENST00000496462 PPP2R5EQ16537 467 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms