RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 TRIM59Q8IWR1 403 aa15.17■□□□□ 0.02
CXCL12-208ENST00000496375 OLIG1Q8TAK6 271 aa15.17■□□□□ 0.02
CXCL12-208ENST00000496375 TAS1R2Q8TE23 839 aa15.17■□□□□ 0.02
CXCL12-208ENST00000496375 JAKMIP2Q96AA8 810 aa15.17■□□□□ 0.02
CXCL12-208ENST00000496375 EDEM2Q9BV94 578 aa15.17■□□□□ 0.02
CXCL12-208ENST00000496375 IMPG2Q9BZV3 1241 aa15.17■□□□□ 0.02
CXCL12-208ENST00000496375 APOBEC3GQ9HC16 384 aaKnown RBP15.17■□□□□ 0.02
CXCL12-208ENST00000496375 POLMQ9NP87 494 aaPredicted RBP15.17■□□□□ 0.02
CXCL12-208ENST00000496375 SPHK2Q9NRA0 654 aa15.17■□□□□ 0.02
CXCL12-208ENST00000496375 TBC1D3BA6NDS4 549 aa15.16■□□□□ 0.02
CXCL12-208ENST00000496375 ADAM23O75077 832 aa15.16■□□□□ 0.02
CXCL12-208ENST00000496375 TULP3O75386 442 aa15.16■□□□□ 0.02
CXCL12-208ENST00000496375 GCLMP48507 274 aa15.16■□□□□ 0.02
CXCL12-208ENST00000496375 MXI1P50539 228 aa15.16■□□□□ 0.02
CXCL12-208ENST00000496375 INCA1Q0VD86 236 aa15.16■□□□□ 0.02
CXCL12-208ENST00000496375 N4BP2L1Q5TBK1 243 aaPredicted RBP15.16■□□□□ 0.02
CXCL12-208ENST00000496375 CLEC20AQ6ZU45 233 aa15.16■□□□□ 0.02
CXCL12-208ENST00000496375 CYP2U1Q7Z449 544 aa15.16■□□□□ 0.02
CXCL12-208ENST00000496375 TMEM25Q86YD3 366 aa15.16■□□□□ 0.02
CXCL12-208ENST00000496375 IRF2BP1Q8IU81 584 aa15.16■□□□□ 0.02
CXCL12-208ENST00000496375 WHAMMQ8TF30 809 aa15.16■□□□□ 0.02
CXCL12-208ENST00000496375 RLN3Q8WXF3 142 aa15.16■□□□□ 0.02
CXCL12-208ENST00000496375 HNRNPABQ99729 332 aaKnown RBP15.16■□□□□ 0.02
CXCL12-208ENST00000496375 KLF16Q9BXK1 252 aaPredicted RBP15.16■□□□□ 0.02
CXCL12-208ENST00000496375 SRRTQ9BXP5 876 aaKnown RBP15.16■□□□□ 0.02
CXCL12-208ENST00000496375 MMRN2Q9H8L6 949 aa15.16■□□□□ 0.02
CXCL12-208ENST00000496375 ANO10Q9NW15 660 aa15.16■□□□□ 0.02
CXCL12-208ENST00000496375 BCCIPQ9P287 314 aaKnown RBP eCLIP15.16■□□□□ 0.02
CXCL12-208ENST00000496375 DEC1Q9P2X7 70 aa15.16■□□□□ 0.02
CXCL12-208ENST00000496375 SCML2Q9UQR0 700 aa15.16■□□□□ 0.02
CXCL12-208ENST00000496375 CACNA1BQ00975 2339 aa15.16■□□□□ 0.02
CXCL12-208ENST00000496375 HHLA1C9JL84 531 aa15.15■□□□□ 0.02
CXCL12-208ENST00000496375 P4HA2O15460 535 aa15.15■□□□□ 0.02
CXCL12-208ENST00000496375 CYP26A1O43174 497 aa15.15■□□□□ 0.02
CXCL12-208ENST00000496375 GREM1O60565 184 aa15.15■□□□□ 0.02
CXCL12-208ENST00000496375 CD58P19256 250 aa15.15■□□□□ 0.02
CXCL12-208ENST00000496375 ACO1P21399 889 aaKnown RBP15.15■□□□□ 0.02
CXCL12-208ENST00000496375 ATP5C1P36542 298 aaKnown RBP15.15■□□□□ 0.02
CXCL12-208ENST00000496375 P2RY2P41231 377 aa15.15■□□□□ 0.02
CXCL12-208ENST00000496375 DHPSP49366 369 aaPredicted RBP15.15■□□□□ 0.02
CXCL12-208ENST00000496375 STX1AQ16623 288 aa15.15■□□□□ 0.02
CXCL12-208ENST00000496375 PREPLQ4J6C6 727 aaPredicted RBP15.15■□□□□ 0.02
CXCL12-208ENST00000496375 HTR3DQ70Z44 454 aa15.15■□□□□ 0.02
CXCL12-208ENST00000496375 PGBD3Q8N328 593 aa15.15■□□□□ 0.02
CXCL12-208ENST00000496375 ZNF513Q8N8E2 541 aaPredicted RBP15.15■□□□□ 0.02
CXCL12-208ENST00000496375 TERB1Q8NA31 727 aa15.15■□□□□ 0.02
CXCL12-208ENST00000496375 HMGB4Q8WW32 186 aa15.15■□□□□ 0.02
CXCL12-208ENST00000496375 CYFIP2Q96F07 1278 aa15.15■□□□□ 0.02
CXCL12-208ENST00000496375 LSM14BQ9BX40 385 aaKnown RBP15.15■□□□□ 0.02
CXCL12-208ENST00000496375 NT5C1AQ9BXI3 368 aa15.15■□□□□ 0.02
CXCL12-208ENST00000496375 NIF3L1Q9GZT8 377 aa15.15■□□□□ 0.02
CXCL12-208ENST00000496375 THAP9Q9H5L6 903 aa15.15■□□□□ 0.02
CXCL12-208ENST00000496375 CYP3A43Q9HB55 503 aa15.15■□□□□ 0.02
CXCL12-208ENST00000496375 CYLDQ9NQC7 956 aa15.15■□□□□ 0.02
CXCL12-208ENST00000496375 OSER1Q9NX31 292 aa15.15■□□□□ 0.02
CXCL12-208ENST00000496375 CHD8Q9HCK8 2581 aa15.15■□□□□ 0.02
CXCL12-208ENST00000496375 TCRBV21S2A2A0A5A6 115 aa15.14■□□□□ 0.01
CXCL12-208ENST00000496375 LNP1A1A4G5 178 aa15.14■□□□□ 0.01
CXCL12-208ENST00000496375 KHNYNO15037 678 aaKnown RBP15.14■□□□□ 0.01
CXCL12-208ENST00000496375 TRIM24O15164 1050 aa15.14■□□□□ 0.01
CXCL12-208ENST00000496375 GOLGA8FQ08AF8 430 aa15.14■□□□□ 0.01
CXCL12-208ENST00000496375 GOLGA8DPQ0D2H9 430 aa15.14■□□□□ 0.01
CXCL12-208ENST00000496375 SKOR2Q2VWA4 1001 aaPredicted RBP15.14■□□□□ 0.01
CXCL12-208ENST00000496375 CCDC40Q4G0X9 1142 aa15.14■□□□□ 0.01
CXCL12-208ENST00000496375 CBWD6Q4V339 395 aa15.14■□□□□ 0.01
CXCL12-208ENST00000496375 CBWD3Q5JTY5 395 aa15.14■□□□□ 0.01
CXCL12-208ENST00000496375 CBWD5Q5RIA9 395 aa15.14■□□□□ 0.01
CXCL12-208ENST00000496375 C10orf76Q5T2E6 689 aa15.14■□□□□ 0.01
CXCL12-208ENST00000496375 CAVIN1Q6NZI2 390 aaKnown RBP15.14■□□□□ 0.01
CXCL12-208ENST00000496375 SASS6Q6UVJ0 657 aa15.14■□□□□ 0.01
CXCL12-208ENST00000496375 NUDT18Q6ZVK8 323 aa15.14■□□□□ 0.01
CXCL12-208ENST00000496375 LPCAT2Q7L5N7 544 aa15.14■□□□□ 0.01
CXCL12-208ENST00000496375 TRMT11Q7Z4G4 463 aaKnown RBP15.14■□□□□ 0.01
CXCL12-208ENST00000496375 FRMD1Q8N878 549 aa15.14■□□□□ 0.01
CXCL12-208ENST00000496375 FBXL13Q8NEE6 735 aa15.14■□□□□ 0.01
CXCL12-208ENST00000496375 ENOX1Q8TC92 643 aaKnown RBP15.14■□□□□ 0.01
CXCL12-208ENST00000496375 PIGKQ92643 395 aa15.14■□□□□ 0.01
CXCL12-208ENST00000496375 SPACA7Q96KW9 195 aa15.14■□□□□ 0.01
CXCL12-208ENST00000496375 FAM124BQ9H5Z6 455 aaPredicted RBP15.14■□□□□ 0.01
CXCL12-208ENST00000496375 NMUR1Q9HB89 426 aa15.14■□□□□ 0.01
CXCL12-208ENST00000496375 LSM7Q9UK45 103 aaKnown RBP15.14■□□□□ 0.01
CXCL12-208ENST00000496375 NUDT5Q9UKK9 219 aa15.14■□□□□ 0.01
CXCL12-208ENST00000496375 PLXND1Q9Y4D7 1925 aa15.13■□□□□ 0.01
CXCL12-208ENST00000496375 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.13■□□□□ 0.01
CXCL12-208ENST00000496375 A0A1W2PQH9 124 aa15.13■□□□□ 0.01
CXCL12-208ENST00000496375 C4orf47A7E2U8 309 aa15.13■□□□□ 0.01
CXCL12-208ENST00000496375 PATE3B3GLJ2 98 aa15.13■□□□□ 0.01
CXCL12-208ENST00000496375 NEDD8-MDP1E9PL57 170 aa15.13■□□□□ 0.01
CXCL12-208ENST00000496375 MDM4O15151 490 aa15.13■□□□□ 0.01
CXCL12-208ENST00000496375 MAP3K13O43283 966 aa15.13■□□□□ 0.01
CXCL12-208ENST00000496375 CILPO75339 1184 aa15.13■□□□□ 0.01
CXCL12-208ENST00000496375 LETM1O95202 739 aaPredicted RBP15.13■□□□□ 0.01
CXCL12-208ENST00000496375 KCNK5O95279 499 aa15.13■□□□□ 0.01
CXCL12-208ENST00000496375 RARGP13631 454 aa15.13■□□□□ 0.01
CXCL12-208ENST00000496375 PMLP29590 882 aa15.13■□□□□ 0.01
CXCL12-208ENST00000496375 FMO5P49326 533 aa15.13■□□□□ 0.01
CXCL12-208ENST00000496375 DCAF17Q5H9S7 520 aaPredicted RBP15.13■□□□□ 0.01
CXCL12-208ENST00000496375 GRAMD4Q6IC98 578 aa15.13■□□□□ 0.01
CXCL12-208ENST00000496375 TPGS1Q6ZTW0 290 aa15.13■□□□□ 0.01
CXCL12-208ENST00000496375 TMEFF1Q8IYR6 380 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms