RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, human

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-223	ENST00000496024	CACNA1I	Q9P0X4	2223 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	E2F8	A0AVK6	867 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	SHISA7	A6NL88	538 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	MAN2B1	O00754	1011 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	SLC9A3R1	O14745	358 aa	Predicted RBP	10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	CAPN9	O14815	690 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	PAPSS1	O43252	624 aa	Predicted RBP	10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	MSI1	O43347	362 aa	Known RBP	10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	GRAP2	O75791	330 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	NFATC1	O95644	943 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	ERBB2	P04626	1255 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	NCAM1	P13591	858 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	TCF3	P15923	654 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	CTH	P32929	405 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	GJA4	P35212	333 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	CLCN5	P51795	746 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	NR1H3	Q13133	447 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	PON2	Q15165	354 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	TAF5	Q15542	800 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	PTPN20	Q4JDL3	420 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	NAA35	Q5VZE5	725 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	NAIF1	Q69YI7	327 aa	Predicted RBP	10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	KLHDC10	Q6PID8	442 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	TMEM110	Q86TL2	294 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	RALGPS2	Q86X27	583 aa	Predicted RBP	10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	FMNL3	Q8IVF7	1028 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	TMEM35B	Q8NCS4	154 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	PJA1	Q8NG27	643 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	CPA5	Q8WXQ8	436 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	IRGQ	Q8WZA9	623 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	DDX1	Q92499	740 aa	Known RBP	10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	PIWIL1	Q96J94	861 aa	Known RBP	10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	C8orf33	Q9H7E9	229 aa	Predicted RBP	10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	LTB4R2	Q9NPC1	389 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	ABCC13	Q9NSE7	274 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	OLA1	Q9NTK5	396 aa	Known RBP	10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	SEPT11	Q9NVA2	429 aa	Known RBP	10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	MRPS17	Q9Y2R5	130 aa	Known RBP	10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	DAAM1	Q9Y4D1	1078 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	MUC6	Q6W4X9	2439 aa		10.28	□□□□□ -0.76
CALD1-223	ENST00000496024	KMT2E	Q8IZD2	1858 aa		10.27	□□□□□ -0.76
CALD1-223	ENST00000496024		A0A1W2PQC6	194 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	LRRC53	A6NM62	1247 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	SART1	O43290	800 aa	Known RBP	10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	STC2	O76061	302 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	CYP17A1	P05093	508 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	GLUL	P15104	373 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	CHRNB2	P17787	502 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	COL9A1	P20849	921 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	CORO1A	P31146	461 aa	Known RBP	10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	RPL34	P49207	117 aa	Known RBP	10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	RNASE9	P60153	205 aa	Known RBP	10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	COG7	P83436	770 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	FMO1	Q01740	532 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	CDR2	Q01850	454 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	DHCR24	Q15392	516 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	C2CD6	Q53TS8	623 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	LY6G5C	Q5SRR4	150 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	SMYD5	Q6GMV2	418 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	FAM183BP	Q6ZVS7	135 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	HTR3D	Q70Z44	454 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	PHLDB2	Q86SQ0	1253 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	ERICH1	Q86X53	443 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	CCDC105	Q8IYK2	499 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	ADGRG2	Q8IZP9	1017 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	SCML4	Q8N228	414 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	ZNF276	Q8N554	614 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	ADAM32	Q8TC27	787 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	IPO4	Q8TEX9	1081 aa	Known RBP	10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	CPLX3	Q8WVH0	158 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	CHFR	Q96EP1	664 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	DDX23	Q9BUQ8	820 aa	Known RBP	10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	XPO4	Q9C0E2	1151 aa	Known RBP	10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	RBM12	Q9NTZ6	932 aa	Known RBP	10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	TBC1D14	Q9P2M4	693 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	NOCT	Q9UK39	431 aa	Known RBP	10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	NAALADL1	Q9UQQ1	740 aa		10.27	□□□□□ -0.77
CALD1-223	ENST00000496024	SYNJ2BP-COX16	A0A087WUM0	186 aa		10.26	□□□□□ -0.77
CALD1-223	ENST00000496024	GOLGA8S	H3BPF8	625 aa		10.26	□□□□□ -0.77
CALD1-223	ENST00000496024	GREM1	O60565	184 aa		10.26	□□□□□ -0.77
CALD1-223	ENST00000496024	KLKB1	P03952	638 aa		10.26	□□□□□ -0.77
CALD1-223	ENST00000496024	FYN	P06241	537 aa		10.26	□□□□□ -0.77
CALD1-223	ENST00000496024	ADH5	P11766	374 aa		10.26	□□□□□ -0.77
CALD1-223	ENST00000496024	FER	P16591	822 aa		10.26	□□□□□ -0.77
CALD1-223	ENST00000496024	GALK1	P51570	392 aa		10.26	□□□□□ -0.77
CALD1-223	ENST00000496024	SNX16	P57768	344 aa		10.26	□□□□□ -0.77
CALD1-223	ENST00000496024	ZNF445	P59923	1031 aa		10.26	□□□□□ -0.77
CALD1-223	ENST00000496024	YWHAZ	P63104	245 aa	Known RBP	10.26	□□□□□ -0.77
CALD1-223	ENST00000496024	NOMO3	P69849	1222 aa		10.26	□□□□□ -0.77
CALD1-223	ENST00000496024	ASIC2	Q16515	512 aa		10.26	□□□□□ -0.77
CALD1-223	ENST00000496024	ANO4	Q32M45	955 aa		10.26	□□□□□ -0.77
CALD1-223	ENST00000496024	DCAF6	Q58WW2	860 aa		10.26	□□□□□ -0.77
CALD1-223	ENST00000496024	SYPL2	Q5VXT5	272 aa		10.26	□□□□□ -0.77
CALD1-223	ENST00000496024	MSANTD2	Q6P1R3	559 aa		10.26	□□□□□ -0.77
CALD1-223	ENST00000496024	RHBDF2	Q6PJF5	856 aa		10.26	□□□□□ -0.77
CALD1-223	ENST00000496024	TPGS1	Q6ZTW0	290 aa		10.26	□□□□□ -0.77
CALD1-223	ENST00000496024	ZNF677	Q86XU0	584 aa		10.26	□□□□□ -0.77
CALD1-223	ENST00000496024	TMEM25	Q86YD3	366 aa		10.26	□□□□□ -0.77
CALD1-223	ENST00000496024	DENND1C	Q8IV53	801 aa		10.26	□□□□□ -0.77
CALD1-223	ENST00000496024	NAT16	Q8N8M0	369 aa		10.26	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms