RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 TNIP3Q96KP6 325 aa9.3□□□□□ -0.92
SORT1-208ENST00000495777 TSG101Q99816 390 aa9.3□□□□□ -0.92
SORT1-208ENST00000495777 CSNK1G1Q9HCP0 422 aa9.3□□□□□ -0.92
SORT1-208ENST00000495777 MARK1Q9P0L2 795 aa9.3□□□□□ -0.92
SORT1-208ENST00000495777 GMIPQ9P107 970 aa9.3□□□□□ -0.92
SORT1-208ENST00000495777 CALCOCO1Q9P1Z2 691 aa9.3□□□□□ -0.92
SORT1-208ENST00000495777 NXF1Q9UBU9 619 aaKnown RBP9.3□□□□□ -0.92
SORT1-208ENST00000495777 CHORDC1Q9UHD1 332 aaPredicted RBP9.3□□□□□ -0.92
SORT1-208ENST00000495777 MAN1B1Q9UKM7 699 aa9.3□□□□□ -0.92
SORT1-208ENST00000495777 MSRB2Q9Y3D2 182 aa9.3□□□□□ -0.92
SORT1-208ENST00000495777 SH3BP1Q9Y3L3 701 aa9.3□□□□□ -0.92
SORT1-208ENST00000495777 PTPRDP23468 1912 aa9.3□□□□□ -0.92
SORT1-208ENST00000495777 DMXL2Q8TDJ6 3036 aa9.3□□□□□ -0.92
SORT1-208ENST00000495777 ZNF638Q14966 1978 aaKnown RBP9.3□□□□□ -0.92
SORT1-208ENST00000495777 ATP8B3O60423 1300 aa9.3□□□□□ -0.92
SORT1-208ENST00000495777 CACNA1EQ15878 2313 aa9.3□□□□□ -0.92
SORT1-208ENST00000495777 LAMA5O15230 3695 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.29□□□□□ -0.92
SORT1-208ENST00000495777 SPAARA0A1B0GVQ0 90 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 H0Y626 953 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 PDXKO00764 312 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 TRIM24O15164 1050 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 CLIC2O15247 247 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 HYAL3O43820 417 aaPredicted RBP9.29□□□□□ -0.92
SORT1-208ENST00000495777 TLR5O60602 858 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 ZNF217O75362 1048 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 TRIM16O95361 564 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 C4BPAP04003 597 aaKnown RBP9.29□□□□□ -0.92
SORT1-208ENST00000495777 CAPNS1P04632 268 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 HOXB2P14652 356 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 RPL13P26373 211 aaKnown RBP9.29□□□□□ -0.92
SORT1-208ENST00000495777 PGFP49763 221 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 AP3M2P53677 418 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 ZNF445P59923 1031 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 SIM1P81133 766 aaPredicted RBP9.29□□□□□ -0.92
SORT1-208ENST00000495777 RPL6Q02878 288 aaKnown RBP9.29□□□□□ -0.92
SORT1-208ENST00000495777 GFPT1Q06210 699 aaPredicted RBP9.29□□□□□ -0.92
SORT1-208ENST00000495777 ZNF33AQ06730 810 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 IFRD2Q12894 506 aaPredicted RBP9.29□□□□□ -0.92
SORT1-208ENST00000495777 NFIL3Q16649 462 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 KNOP1Q1ED39 458 aaKnown RBP9.29□□□□□ -0.92
SORT1-208ENST00000495777 EDRF1Q3B7T1 1238 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 EGFLAMQ63HQ2 1017 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 KIAA1211LQ6NV74 962 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 NUDT18Q6ZVK8 323 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 SLC41A1Q8IVJ1 513 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 NELFCDQ8IXH7 590 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 CRYBG2Q8N1P7 616 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 PGBD3Q8N328 593 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 NAT16Q8N8M0 369 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 PARD3BQ8TEW8 1205 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 ZCCHC14Q8WYQ9 949 aaKnown RBP9.29□□□□□ -0.92
SORT1-208ENST00000495777 SMOQ99835 787 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 GABRG3Q99928 467 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 BPIFA3Q9BQP9 254 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 KLF16Q9BXK1 252 aaPredicted RBP9.29□□□□□ -0.92
SORT1-208ENST00000495777 SDCBP2Q9H190 292 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 SLC39A2Q9NP94 309 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 CYLDQ9NQC7 956 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 DNAAF2Q9NVR5 837 aaKnown RBP9.29□□□□□ -0.92
SORT1-208ENST00000495777 KLK13Q9UKR3 277 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 BAHCC1Q9P281 2608 aa9.29□□□□□ -0.92
SORT1-208ENST00000495777 NUP205Q92621 2012 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 SYCE3A1L190 88 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 LRRIQ3A6PVS8 624 aaPredicted RBP9.28□□□□□ -0.92
SORT1-208ENST00000495777 ARHGAP33O14559 1287 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 CALUO43852 315 aaPredicted RBP9.28□□□□□ -0.92
SORT1-208ENST00000495777 OPHN1O60890 802 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 GJB3O75712 270 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 AP1G2O75843 785 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 BEST1O76090 585 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 VNN1O95497 513 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 CFIP05156 583 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 CD59P13987 128 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 NDUFV2P19404 249 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 CASP1P29466 404 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 CASP4P49662 377 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 TPM4P67936 248 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 TYRO3Q06418 890 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 STK4Q13043 487 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 PAK1Q13153 545 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 SLC14A1Q13336 389 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 NCOA4Q13772 614 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 HNRNPDQ14103 355 aaKnown RBP9.28□□□□□ -0.92
SORT1-208ENST00000495777 ANO4Q32M45 955 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 ZNF699Q32M78 642 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 ZNF667Q5HYK9 610 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 GRAMD4Q6IC98 578 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 KLHDC10Q6PID8 442 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 LRSAM1Q6UWE0 723 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 RAB44Q7Z6P3 723 aaPredicted RBP9.28□□□□□ -0.92
SORT1-208ENST00000495777 HDDC3Q8N4P3 179 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 MINDY1Q8N5J2 469 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 KIAA0895Q8NCT3 520 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 IPO4Q8TEX9 1081 aaKnown RBP9.28□□□□□ -0.92
SORT1-208ENST00000495777 ZNF419Q96HQ0 510 aaPredicted RBP9.28□□□□□ -0.92
SORT1-208ENST00000495777 ACOX2Q99424 681 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 MED10Q9BTT4 135 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 FBXO44Q9H4M3 255 aa9.28□□□□□ -0.92
SORT1-208ENST00000495777 FSCN3Q9NQT6 498 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms