RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 DEKP35659 375 aaKnown RBP20.36■□□□□ 0.85
ATG3-208ENST00000495756 ARHGAP25P42331 645 aa20.36■□□□□ 0.85
ATG3-208ENST00000495756 TEAD2Q15562 447 aa20.36■□□□□ 0.85
ATG3-208ENST00000495756 TXNDC8Q6A555 127 aa20.36■□□□□ 0.85
ATG3-208ENST00000495756 TADA2BQ86TJ2 420 aa20.36■□□□□ 0.85
ATG3-208ENST00000495756 ITFG1Q8TB96 612 aa20.36■□□□□ 0.85
ATG3-208ENST00000495756 RNF139Q8WU17 664 aa20.36■□□□□ 0.85
ATG3-208ENST00000495756 RIPOR3Q96MK2 946 aa20.36■□□□□ 0.85
ATG3-208ENST00000495756 CDK5RAP1Q96SZ6 601 aaKnown RBP20.36■□□□□ 0.85
ATG3-208ENST00000495756 ANAPC7Q9UJX3 599 aa20.36■□□□□ 0.85
ATG3-208ENST00000495756 CLUHO75153 1309 aa20.35■□□□□ 0.85
ATG3-208ENST00000495756 KRT86O43790 486 aa20.35■□□□□ 0.85
ATG3-208ENST00000495756 TBX18O95935 607 aa20.35■□□□□ 0.85
ATG3-208ENST00000495756 GPD1P21695 349 aa20.35■□□□□ 0.85
ATG3-208ENST00000495756 FSHRP23945 695 aa20.35■□□□□ 0.85
ATG3-208ENST00000495756 DDX6P26196 483 aaKnown RBP eCLIP20.35■□□□□ 0.85
ATG3-208ENST00000495756 SDC4P31431 198 aa20.35■□□□□ 0.85
ATG3-208ENST00000495756 MTHFRP42898 656 aa20.35■□□□□ 0.85
ATG3-208ENST00000495756 NOP2P46087 812 aaKnown RBP20.35■□□□□ 0.85
ATG3-208ENST00000495756 ZNF143P52747 638 aaPredicted RBP20.35■□□□□ 0.85
ATG3-208ENST00000495756 HADHBP55084 474 aaKnown RBP20.35■□□□□ 0.85
ATG3-208ENST00000495756 OGDHQ02218 1023 aa20.35■□□□□ 0.85
ATG3-208ENST00000495756 ARHGAP15Q53QZ3 475 aa20.35■□□□□ 0.85
ATG3-208ENST00000495756 C10orf120Q5SQS8 335 aa20.35■□□□□ 0.85
ATG3-208ENST00000495756 STXBP5Q5T5C0 1151 aa20.35■□□□□ 0.85
ATG3-208ENST00000495756 MSANTD2Q6P1R3 559 aa20.35■□□□□ 0.85
ATG3-208ENST00000495756 FNIP1Q8TF40 1166 aa20.35■□□□□ 0.85
ATG3-208ENST00000495756 NT5C3BQ969T7 300 aa20.35■□□□□ 0.85
ATG3-208ENST00000495756 CFAP57Q96MR6 1250 aa20.35■□□□□ 0.85
ATG3-208ENST00000495756 TRPC7Q9HCX4 862 aa20.35■□□□□ 0.85
ATG3-208ENST00000495756 LZTFL1Q9NQ48 299 aa20.35■□□□□ 0.85
ATG3-208ENST00000495756 OLA1Q9NTK5 396 aaKnown RBP20.35■□□□□ 0.85
ATG3-208ENST00000495756 MYO1FO00160 1098 aa20.34■□□□□ 0.85
ATG3-208ENST00000495756 DPYSL4O14531 572 aa20.34■□□□□ 0.85
ATG3-208ENST00000495756 COCHO43405 550 aa20.34■□□□□ 0.85
ATG3-208ENST00000495756 CEBPBP17676 345 aa20.34■□□□□ 0.85
ATG3-208ENST00000495756 PTPN9P43378 593 aa20.34■□□□□ 0.85
ATG3-208ENST00000495756 SLC25A52Q3SY17 297 aa20.34■□□□□ 0.85
ATG3-208ENST00000495756 CCDC14Q49A88 953 aa20.34■□□□□ 0.85
ATG3-208ENST00000495756 ARHGAP29Q52LW3 1261 aa20.34■□□□□ 0.85
ATG3-208ENST00000495756 GPR158Q5T848 1215 aa20.34■□□□□ 0.85
ATG3-208ENST00000495756 KLHDC10Q6PID8 442 aa20.34■□□□□ 0.85
ATG3-208ENST00000495756 REXO1L1PQ8IX06 675 aa20.34■□□□□ 0.85
ATG3-208ENST00000495756 MAB21L3Q8N8X9 362 aa20.34■□□□□ 0.85
ATG3-208ENST00000495756 DQX1Q8TE96 717 aaKnown RBP20.34■□□□□ 0.85
ATG3-208ENST00000495756 HLA-CQ95604 372 aa20.34■□□□□ 0.85
ATG3-208ENST00000495756 BTBD6Q96KE9 485 aa20.34■□□□□ 0.85
ATG3-208ENST00000495756 NPY6RQ99463 290 aa20.34■□□□□ 0.85
ATG3-208ENST00000495756 CNPY3Q9BT09 278 aa20.34■□□□□ 0.85
ATG3-208ENST00000495756 SMOC2Q9H3U7 446 aa20.34■□□□□ 0.85
ATG3-208ENST00000495756 TRMT1Q9NXH9 659 aaKnown RBP20.34■□□□□ 0.85
ATG3-208ENST00000495756 RRN3Q9NYV6 651 aa20.34■□□□□ 0.85
ATG3-208ENST00000495756 STAP1Q9ULZ2 295 aa20.34■□□□□ 0.85
ATG3-208ENST00000495756 MACROD2A1Z1Q3 448 aa20.33■□□□□ 0.85
ATG3-208ENST00000495756 SOBPA7XYQ1 873 aa20.33■□□□□ 0.85
ATG3-208ENST00000495756 OLFM2O95897 454 aa20.33■□□□□ 0.85
ATG3-208ENST00000495756 PFKLP17858 780 aa20.33■□□□□ 0.85
ATG3-208ENST00000495756 HDCP19113 662 aa20.33■□□□□ 0.85
ATG3-208ENST00000495756 ATP5C1P36542 298 aaKnown RBP20.33■□□□□ 0.85
ATG3-208ENST00000495756 PITX1P78337 314 aaPredicted RBP20.33■□□□□ 0.85
ATG3-208ENST00000495756 ZNF252P-AS1Q0IIN9 211 aa20.33■□□□□ 0.85
ATG3-208ENST00000495756 EFEMP1Q12805 493 aa20.33■□□□□ 0.85
ATG3-208ENST00000495756 CCAR2Q8N163 923 aaKnown RBP20.33■□□□□ 0.85
ATG3-208ENST00000495756 KIAA1524Q8TCG1 905 aa20.33■□□□□ 0.85
ATG3-208ENST00000495756 ING5Q8WYH8 240 aa20.33■□□□□ 0.85
ATG3-208ENST00000495756 SUSD6Q92537 303 aa20.33■□□□□ 0.85
ATG3-208ENST00000495756 CALR3Q96L12 384 aaKnown RBP20.33■□□□□ 0.85
ATG3-208ENST00000495756 NECTIN4Q96NY8 510 aa20.33■□□□□ 0.85
ATG3-208ENST00000495756 SLC22A12Q96S37 553 aa20.33■□□□□ 0.85
ATG3-208ENST00000495756 SLC46A2Q9BY10 475 aa20.33■□□□□ 0.85
ATG3-208ENST00000495756 ADAM33Q9BZ11 813 aa20.33■□□□□ 0.85
ATG3-208ENST00000495756 NACA2Q9H009 215 aa20.33■□□□□ 0.85
ATG3-208ENST00000495756 RNF38Q9H0F5 515 aa20.33■□□□□ 0.85
ATG3-208ENST00000495756 TASP1Q9H6P5 420 aa20.33■□□□□ 0.85
ATG3-208ENST00000495756 IP6K2Q9UHH9 426 aa20.33■□□□□ 0.85
ATG3-208ENST00000495756 DNMT3LQ9UJW3 386 aa20.33■□□□□ 0.85
ATG3-208ENST00000495756 USP15Q9Y4E8 981 aaPredicted RBP20.33■□□□□ 0.85
ATG3-208ENST00000495756 TRAV19A0A0A6YYK7 116 aa20.32■□□□□ 0.84
ATG3-208ENST00000495756 MDM4O15151 490 aa20.32■□□□□ 0.84
ATG3-208ENST00000495756 BUB1O43683 1085 aa20.32■□□□□ 0.84
ATG3-208ENST00000495756 TRUB2O95900 331 aaKnown RBP20.32■□□□□ 0.84
ATG3-208ENST00000495756 TFE3P19532 575 aaPredicted RBP20.32■□□□□ 0.84
ATG3-208ENST00000495756 PSMA2P25787 234 aa20.32■□□□□ 0.84
ATG3-208ENST00000495756 SULT1E1P49888 294 aa20.32■□□□□ 0.84
ATG3-208ENST00000495756 NAP1L1P55209 391 aaKnown RBP20.32■□□□□ 0.84
ATG3-208ENST00000495756 C15orf59Q2T9L4 293 aaPredicted RBP20.32■□□□□ 0.84
ATG3-208ENST00000495756 OTUD1Q5VV17 481 aaPredicted RBP20.32■□□□□ 0.84
ATG3-208ENST00000495756 TAC4Q86UU9 113 aa20.32■□□□□ 0.84
ATG3-208ENST00000495756 RNF10Q8N5U6 811 aaKnown RBP20.32■□□□□ 0.84
ATG3-208ENST00000495756 ARL14EPQ8N8R7 260 aaPredicted RBP20.32■□□□□ 0.84
ATG3-208ENST00000495756 ADAM32Q8TC27 787 aa20.32■□□□□ 0.84
ATG3-208ENST00000495756 CYP2S1Q96SQ9 504 aa20.32■□□□□ 0.84
ATG3-208ENST00000495756 TBCBQ99426 244 aa20.32■□□□□ 0.84
ATG3-208ENST00000495756 FAM204AQ9H8W3 233 aa20.32■□□□□ 0.84
ATG3-208ENST00000495756 MARCH2Q9P0N8 246 aa20.32■□□□□ 0.84
ATG3-208ENST00000495756 SFMBT1Q9UHJ3 866 aa20.32■□□□□ 0.84
ATG3-208ENST00000495756 LCMT1Q9UIC8 334 aa20.32■□□□□ 0.84
ATG3-208ENST00000495756 ZMYM5Q9UJ78 669 aa20.32■□□□□ 0.84
ATG3-208ENST00000495756 GUCA1BQ9UMX6 200 aa20.32■□□□□ 0.84
ATG3-208ENST00000495756 ZKSCAN5Q9Y2L8 839 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms