RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 TNFSF14O43557 240 aa14.22□□□□□ -0.13
COL1A1-209ENST00000495677 ZIC2O95409 532 aaPredicted RBP14.22□□□□□ -0.13
COL1A1-209ENST00000495677 DGKGP49619 791 aa14.22□□□□□ -0.13
COL1A1-209ENST00000495677 SLC5A3P53794 718 aa14.22□□□□□ -0.13
COL1A1-209ENST00000495677 IFRD2Q12894 506 aaPredicted RBP14.22□□□□□ -0.13
COL1A1-209ENST00000495677 WDR72Q3MJ13 1102 aa14.22□□□□□ -0.13
COL1A1-209ENST00000495677 FUT11Q495W5 492 aa14.22□□□□□ -0.13
COL1A1-209ENST00000495677 DCAF12L1Q5VU92 463 aa14.22□□□□□ -0.13
COL1A1-209ENST00000495677 KIAA1324Q6UXG2 1013 aaKnown RBP14.22□□□□□ -0.13
COL1A1-209ENST00000495677 PAQR9Q6ZVX9 377 aa14.22□□□□□ -0.13
COL1A1-209ENST00000495677 USP49Q70CQ1 688 aa14.22□□□□□ -0.13
COL1A1-209ENST00000495677 ZCCHC9Q8N567 271 aaKnown RBP14.22□□□□□ -0.13
COL1A1-209ENST00000495677 NUP58Q9BVL2 599 aa14.22□□□□□ -0.13
COL1A1-209ENST00000495677 MKRN2Q9H000 416 aaKnown RBP14.22□□□□□ -0.13
COL1A1-209ENST00000495677 SLC6A17Q9H1V8 727 aa14.22□□□□□ -0.13
COL1A1-209ENST00000495677 DPEP3Q9H4B8 488 aa14.22□□□□□ -0.13
COL1A1-209ENST00000495677 OSGEPQ9NPF4 335 aa14.22□□□□□ -0.13
COL1A1-209ENST00000495677 THAP10Q9P2Z0 257 aaPredicted RBP14.22□□□□□ -0.13
COL1A1-209ENST00000495677 FNDC3AQ9Y2H6 1198 aaKnown RBP14.22□□□□□ -0.13
COL1A1-209ENST00000495677 STON1Q9Y6Q2 735 aa14.22□□□□□ -0.13
COL1A1-209ENST00000495677 ATP8B3O60423 1300 aa14.21□□□□□ -0.13
COL1A1-209ENST00000495677 ATXN7O15265 892 aaPredicted RBP14.21□□□□□ -0.13
COL1A1-209ENST00000495677 PAPSS1O43252 624 aaPredicted RBP14.21□□□□□ -0.13
COL1A1-209ENST00000495677 TLR5O60602 858 aa14.21□□□□□ -0.13
COL1A1-209ENST00000495677 ATICP31939 592 aa14.21□□□□□ -0.13
COL1A1-209ENST00000495677 ABCG1P45844 678 aa14.21□□□□□ -0.13
COL1A1-209ENST00000495677 TPMTP51580 245 aa14.21□□□□□ -0.13
COL1A1-209ENST00000495677 STARD3Q14849 445 aa14.21□□□□□ -0.13
COL1A1-209ENST00000495677 SF3A1Q15459 793 aaKnown RBP14.21□□□□□ -0.13
COL1A1-209ENST00000495677 RRAGBQ5VZM2 374 aa14.21□□□□□ -0.13
COL1A1-209ENST00000495677 KLHDC10Q6PID8 442 aa14.21□□□□□ -0.13
COL1A1-209ENST00000495677 CBWD2Q8IUF1 395 aa14.21□□□□□ -0.13
COL1A1-209ENST00000495677 SLC39A7Q92504 469 aa14.21□□□□□ -0.13
COL1A1-209ENST00000495677 FBXO44Q9H4M3 255 aa14.21□□□□□ -0.13
COL1A1-209ENST00000495677 VRTNQ9H8Y1 702 aa14.21□□□□□ -0.13
COL1A1-209ENST00000495677 CSNK1G1Q9HCP0 422 aa14.21□□□□□ -0.13
COL1A1-209ENST00000495677 DMAP1Q9NPF5 467 aaPredicted RBP14.21□□□□□ -0.13
COL1A1-209ENST00000495677 CYLDQ9NQC7 956 aa14.21□□□□□ -0.13
COL1A1-209ENST00000495677 PCDHGA12O60330 932 aa14.2□□□□□ -0.14
COL1A1-209ENST00000495677 C1QL1O75973 258 aa14.2□□□□□ -0.14
COL1A1-209ENST00000495677 ATP5C1P36542 298 aaKnown RBP14.2□□□□□ -0.14
COL1A1-209ENST00000495677 TNNC1P63316 161 aa14.2□□□□□ -0.14
COL1A1-209ENST00000495677 GOLGA8FQ08AF8 430 aa14.2□□□□□ -0.14
COL1A1-209ENST00000495677 GOLGA8DPQ0D2H9 430 aa14.2□□□□□ -0.14
COL1A1-209ENST00000495677 TPGS1Q6ZTW0 290 aa14.2□□□□□ -0.14
COL1A1-209ENST00000495677 BRAPQ7Z569 592 aa14.2□□□□□ -0.14
COL1A1-209ENST00000495677 FAM35AQ86V20 835 aa14.2□□□□□ -0.14
COL1A1-209ENST00000495677 TMPRSS12Q86WS5 348 aa14.2□□□□□ -0.14
COL1A1-209ENST00000495677 TMPRSS6Q8IU80 811 aa14.2□□□□□ -0.14
COL1A1-209ENST00000495677 ZNF276Q8N554 614 aa14.2□□□□□ -0.14
COL1A1-209ENST00000495677 NOC3LQ8WTT2 800 aaKnown RBP14.2□□□□□ -0.14
COL1A1-209ENST00000495677 SIPA1Q96FS4 1042 aa14.2□□□□□ -0.14
COL1A1-209ENST00000495677 SMARCD1Q96GM5 515 aa14.2□□□□□ -0.14
COL1A1-209ENST00000495677 FGFBP2Q9BYJ0 223 aa14.2□□□□□ -0.14
COL1A1-209ENST00000495677 MIR1-1HGQ9H1L0 117 aa14.2□□□□□ -0.14
COL1A1-209ENST00000495677 TLR8Q9NR97 1041 aaKnown RBP14.2□□□□□ -0.14
COL1A1-209ENST00000495677 PANK4Q9NVE7 773 aa14.2□□□□□ -0.14
COL1A1-209ENST00000495677 GMIPQ9P107 970 aa14.2□□□□□ -0.14
COL1A1-209ENST00000495677 EIF2B4Q9UI10 523 aaKnown RBP14.2□□□□□ -0.14
COL1A1-209ENST00000495677 LSM7Q9UK45 103 aaKnown RBP14.2□□□□□ -0.14
COL1A1-209ENST00000495677 ARID1BQ8NFD5 2236 aaPredicted RBP14.2□□□□□ -0.14
COL1A1-209ENST00000495677 KALRNO60229 2985 aa14.2□□□□□ -0.14
COL1A1-209ENST00000495677 PLXNA2O75051 1894 aa14.19□□□□□ -0.14
COL1A1-209ENST00000495677 COL6A6A6NMZ7 2263 aa14.19□□□□□ -0.14
COL1A1-209ENST00000495677 IDEP14735 1019 aa14.19□□□□□ -0.14
COL1A1-209ENST00000495677 TNNI1P19237 187 aa14.19□□□□□ -0.14
COL1A1-209ENST00000495677 GJB2P29033 226 aa14.19□□□□□ -0.14
COL1A1-209ENST00000495677 IL12RB1P42701 662 aa14.19□□□□□ -0.14
COL1A1-209ENST00000495677 PLA2G4AP47712 749 aa14.19□□□□□ -0.14
COL1A1-209ENST00000495677 AFF3P51826 1226 aaKnown RBP14.19□□□□□ -0.14
COL1A1-209ENST00000495677 PSMD6Q15008 389 aa14.19□□□□□ -0.14
COL1A1-209ENST00000495677 Q6ZNB5 142 aa14.19□□□□□ -0.14
COL1A1-209ENST00000495677 STXBP4Q6ZWJ1 553 aa14.19□□□□□ -0.14
COL1A1-209ENST00000495677 SPRYD3Q8NCJ5 442 aa14.19□□□□□ -0.14
COL1A1-209ENST00000495677 ZMIZ2Q8NF64 920 aa14.19□□□□□ -0.14
COL1A1-209ENST00000495677 ENGASEQ8NFI3 743 aa14.19□□□□□ -0.14
COL1A1-209ENST00000495677 UCMAQ8WVF2 138 aa14.19□□□□□ -0.14
COL1A1-209ENST00000495677 PRCCQ92733 491 aaPredicted RBP14.19□□□□□ -0.14
COL1A1-209ENST00000495677 CRELD1Q96HD1 420 aa14.19□□□□□ -0.14
COL1A1-209ENST00000495677 TNIP3Q96KP6 325 aa14.19□□□□□ -0.14
COL1A1-209ENST00000495677 NACA2Q9H009 215 aa14.19□□□□□ -0.14
COL1A1-209ENST00000495677 XYLT2Q9H1B5 865 aa14.19□□□□□ -0.14
COL1A1-209ENST00000495677 PRORYQ9H606 182 aa14.19□□□□□ -0.14
COL1A1-209ENST00000495677 HSPBP1Q9NZL4 362 aa14.19□□□□□ -0.14
COL1A1-209ENST00000495677 BTBD3Q9Y2F9 522 aa14.19□□□□□ -0.14
COL1A1-209ENST00000495677 SRPRBQ9Y5M8 271 aaKnown RBP14.19□□□□□ -0.14
COL1A1-209ENST00000495677 DFNA5O60443 496 aa14.18□□□□□ -0.14
COL1A1-209ENST00000495677 TBX18O95935 607 aa14.18□□□□□ -0.14
COL1A1-209ENST00000495677 PENKP01210 267 aaPredicted RBP14.18□□□□□ -0.14
COL1A1-209ENST00000495677 IRF1P10914 325 aa14.18□□□□□ -0.14
COL1A1-209ENST00000495677 CDK4P11802 303 aa14.18□□□□□ -0.14
COL1A1-209ENST00000495677 HLA-EP13747 358 aa14.18□□□□□ -0.14
COL1A1-209ENST00000495677 GRK6P43250 576 aa14.18□□□□□ -0.14
COL1A1-209ENST00000495677 PGFP49763 221 aa14.18□□□□□ -0.14
COL1A1-209ENST00000495677 COPAP53621 1224 aa14.18□□□□□ -0.14
COL1A1-209ENST00000495677 SNRPFP62306 86 aaKnown RBP14.18□□□□□ -0.14
COL1A1-209ENST00000495677 ORC1Q13415 861 aa14.18□□□□□ -0.14
COL1A1-209ENST00000495677 FUKQ8N0W3 1084 aa14.18□□□□□ -0.14
COL1A1-209ENST00000495677 ZNF516Q92618 1163 aa14.18□□□□□ -0.14
COL1A1-209ENST00000495677 IGSF8Q969P0 613 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms